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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95561_evm1 >transcript:BL95561_evm1-protein ID=transcript:BL95561_evm1-protein|Name=transcript:BL95561_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=201bp
MSDRFKGTADTATFGNRDVDSHPRYVQWTVSGPVGAPGAHVQLRVASALG
SKHGQACTDLVCYAMRRFTRTIVRQAANGGRECGGYSSEDRPCNRFCSNG
DCSCSTRCSTTNDSENGGDSSLELMKILIPSILSSVTVLVVAILVVCWKR
PNNAVANSSTTTAVEDMGMVGSIVGLAPQKNEGAPPAYTPRASPGMPSVS
M Run BLAST on NCBI mRNA from alignment at Sc0000060:923089..924798+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95561_evm1 ID=transcript:BL95561_evm1|Name=transcript:BL95561_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1710bp|location=Sequence derived from alignment at Sc0000060:923089..924798+ (Branchiostoma lanceolatum)
ATGTCCGATCGATTTGTAAAGCGTGAAGGTTATTCATTGATCACCAAGTT
GTATACCTCCACCTGCAAAGCCAAAGGTCTTCCAGGAAATTCGTGATTGA
ACCCATAGGAGCTAACCGTGTGACGCAGCAGAAATAACAGTCCTGAAAGT
TGGGTTATTTCTGCCAAGATGCGCTGGAAGATCGCGACATTCTCGGGTTT
GCTCCTGTTGGTATCTCTCTTCATTGCCGACACAGAAGGGCACAGCAGAC
ACGGCCACTTTTGGGAACAGAGACGTAGACAGCCATCCCCGGTACGTCCA
GTGGACTGTGTCTGGTCCAGTTGGTGCTCCTGGGGCCCATGTTCAGCTCC
GTGTGGCCTCAGCTCTGGGCAGCAAACACGGACAAGGTGAGACTTTTTTT
CGTGGCAGAGGACTTGTACTTTATGGAGCATCAAACTGCATGTAGGTGAC
ACGGTGGCCTTATGGTTAGGTTTTTGAACATGGTGGTACCGAGTTCGATT
CTCTGACAGACCCCGATGTTGTGCCCTTTGGAATTAAGGCACTTTACACA
TTTTTTTTCGCTCTCGACTAAGGTGAACACCAGTACCTAGTTTCGGCTAG
AGACGTCCCTCAGGCCGTTAAATGGGGGTTCCGCGTTTGAGGAGAACCAC
ACCTAAAACCCGCCACCCTTATCCGAAAAAAGTAGTGGTCCTTCCCGGTC
AGTGAGTGAGTCAAATAAATCTGTTCCGGATACGCAGCTTGTACAGACCT
GGTGTGTTACGCCATGAGACGGTTTACCAGGTATGGCATGATGCAATACG
TACGTACAAACGTGTAAGAACTAGTACTCTCGCCAAAAACGGTTACTCAA
GCAACTGGATAAAATTTCGAAACAGTCTGTTCCGAAATTTTTGTTTCGAA
ATTTTTTCCAGTTGCTTGAGTAACTAGTTTTGGCGTATCTTACTACCTGG
ATGTCTAACATTCATCAACGTAACTAGTACTCTCATTTTTCTATAGGACC
ATCGTCCGACAAGCTGCCAACGGTGGTAGAGAGTGCGGTGGGTACAGCAG
TGAGGACCGACCCTGCAATCGGTTCTGTTCAAACGGAGACTGTAGCTGTT
CTACCCGCTGTTCTACCACCAATGACTCAGGTGAGAAAAAGACTATTGTG
TTCAGGCTAGCGTATTACATATTTGCCATCTCTCTATTCTAAAGTCAAGT
CTTTACCAGACTCTTTGGGGTTTCTTAAAAGAAAATAGAAATTGGCGCAA
ATCTGAAACTCTATGGCCGGTAAATCTTGTCAAGTTATTCCCTCCATTTA
GCTAATCTTTATTGCTGTCGTCAGTAACCTAGGAAATCTGGTAATTTTGG
CACAAATGATGACTTTCCGTTGATCTCAGCTAAGTTAAATGGTCTTGCGA
TACACAATTATAGTATCCTCACTTTGTTTCCCTACTGTCCACCACAGAAA
ATGGAGGCGACAGCAGTCTGGAACTCATGAAGATTTTAATTCCATCAATT
CTGAGCAGCGTGACCGTCCTTGTGGTTGCAATACTCGTGGTCTGCTGGAA
GCGTCCGAATAATGCGGTCGCGAACTCCAGCACGACTACCGCTGTGGAGG
ACATGGGTATGGTGGGAAGTATCGTGGGCTTGGCCCCCCAAAAGAACGAA
GGTGCACCGCCAGCCTACACCCCCAGAGCAAGTCCTGGAATGCCATCGGT
GTCCATGTAA Coding sequence (CDS) from alignment at Sc0000060:923089..924798+ >transcript:BL95561_evm1 ID=transcript:BL95561_evm1|Name=transcript:BL95561_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3030bp|location=Sequence derived from alignment at Sc0000060:923089..924798+ (Branchiostoma lanceolatum)
ATGTCCGATCGATTTAAGGGCACAGCAGACACGGCCACTTTTGGGAACAG
AGACGTAGACAGCCATCCCCGGTACGTCCAGTGGACTGTGTCTGGTCCAG
TTGGTGCTCCTGGGGCCCATGTTCAGCTCCGTGTGGCCTCAGCTCTGGGC
AGCAAACACGGACAAGCTTGTACAGACCTGGTGTGTTACGCCATGAGACG
GTTTACCAGGACCATCGTCCGACAAGCTGCCAACGGTGGTAGAGAGTGCG
GTGGGTACAGCAGTGAGGACCGACCCTGCAATCGGTTCTGTTCAAACGGA
GACTGTAGCTGTTCTACCCGCTGTTCTACCACCAATGACTCAGAAAATGG
AGGCGACAGCAGTCTGGAACTCATGAAGATTTTAATTCCATCAATTCTGA
GCAGCGTGACCGTCCTTGTGGTTGCAATACTCGTGGTCTGCTGGAAGCGT
CCGAATAATGCGGTCGCGAACTCCAGCACGACTACCGCTGTGGAGGACAT
GGGTATGGTGGGAAGTATCGTGGGCTTGGCCCCCCAAAAGAACGAAGGTG
CACCGCCAGCCTACACCCCCAGAGCAAGTCCTGGAATGCCATCGGTGTCC
ATGTAAATGTCCGATCGATTTAAGGGCACAGCAGACACGGCCACTTTTGG
GAACAGAGACGTAGACAGCCATCCCCGGTACGTCCAGTGGACTGTGTCTG
GTCCAGTTGGTGCTCCTGGGGCCCATGTTCAGCTCCGTGTGGCCTCAGCT
CTGGGCAGCAAACACGGACAAGCTTGTACAGACCTGGTGTGTTACGCCAT
GAGACGGTTTACCAGGACCATCGTCCGACAAGCTGCCAACGGTGGTAGAG
AGTGCGGTGGGTACAGCAGTGAGGACCGACCCTGCAATCGGTTCTGTTCA
AACGGAGACTGTAGCTGTTCTACCCGCTGTTCTACCACCAATGACTCAGA
AAATGGAGGCGACAGCAGTCTGGAACTCATGAAGATTTTAATTCCATCAA
TTCTGAGCAGCGTGACCGTCCTTGTGGTTGCAATACTCGTGGTCTGCTGG
AAGCGTCCGAATAATGCGGTCGCGAACTCCAGCACGACTACCGCTGTGGA
GGACATGGGTATGGTGGGAAGTATCGTGGGCTTGGCCCCCCAAAAGAACG
AAGGTGCACCGCCAGCCTACACCCCCAGAGCAAGTCCTGGAATGCCATCG
GTGTCCATGTAAATGTCCGATCGATTTAAGGGCACAGCAGACACGGCCAC
TTTTGGGAACAGAGACGTAGACAGCCATCCCCGGTACGTCCAGTGGACTG
TGTCTGGTCCAGTTGGTGCTCCTGGGGCCCATGTTCAGCTCCGTGTGGCC
TCAGCTCTGGGCAGCAAACACGGACAAGCTTGTACAGACCTGGTGTGTTA
CGCCATGAGACGGTTTACCAGGACCATCGTCCGACAAGCTGCCAACGGTG
GTAGAGAGTGCGGTGGGTACAGCAGTGAGGACCGACCCTGCAATCGGTTC
TGTTCAAACGGAGACTGTAGCTGTTCTACCCGCTGTTCTACCACCAATGA
CTCAGAAAATGGAGGCGACAGCAGTCTGGAACTCATGAAGATTTTAATTC
CATCAATTCTGAGCAGCGTGACCGTCCTTGTGGTTGCAATACTCGTGGTC
TGCTGGAAGCGTCCGAATAATGCGGTCGCGAACTCCAGCACGACTACCGC
TGTGGAGGACATGGGTATGGTGGGAAGTATCGTGGGCTTGGCCCCCCAAA
AGAACGAAGGTGCACCGCCAGCCTACACCCCCAGAGCAAGTCCTGGAATG
CCATCGGTGTCCATGTAAATGTCCGATCGATTTAAGGGCACAGCAGACAC
GGCCACTTTTGGGAACAGAGACGTAGACAGCCATCCCCGGTACGTCCAGT
GGACTGTGTCTGGTCCAGTTGGTGCTCCTGGGGCCCATGTTCAGCTCCGT
GTGGCCTCAGCTCTGGGCAGCAAACACGGACAAGCTTGTACAGACCTGGT
GTGTTACGCCATGAGACGGTTTACCAGGACCATCGTCCGACAAGCTGCCA
ACGGTGGTAGAGAGTGCGGTGGGTACAGCAGTGAGGACCGACCCTGCAAT
CGGTTCTGTTCAAACGGAGACTGTAGCTGTTCTACCCGCTGTTCTACCAC
CAATGACTCAGAAAATGGAGGCGACAGCAGTCTGGAACTCATGAAGATTT
TAATTCCATCAATTCTGAGCAGCGTGACCGTCCTTGTGGTTGCAATACTC
GTGGTCTGCTGGAAGCGTCCGAATAATGCGGTCGCGAACTCCAGCACGAC
TACCGCTGTGGAGGACATGGGTATGGTGGGAAGTATCGTGGGCTTGGCCC
CCCAAAAGAACGAAGGTGCACCGCCAGCCTACACCCCCAGAGCAAGTCCT
GGAATGCCATCGGTGTCCATGTAAATGTCCGATCGATTTAAGGGCACAGC
AGACACGGCCACTTTTGGGAACAGAGACGTAGACAGCCATCCCCGGTACG
TCCAGTGGACTGTGTCTGGTCCAGTTGGTGCTCCTGGGGCCCATGTTCAG
CTCCGTGTGGCCTCAGCTCTGGGCAGCAAACACGGACAAGCTTGTACAGA
CCTGGTGTGTTACGCCATGAGACGGTTTACCAGGACCATCGTCCGACAAG
CTGCCAACGGTGGTAGAGAGTGCGGTGGGTACAGCAGTGAGGACCGACCC
TGCAATCGGTTCTGTTCAAACGGAGACTGTAGCTGTTCTACCCGCTGTTC
TACCACCAATGACTCAGAAAATGGAGGCGACAGCAGTCTGGAACTCATGA
AGATTTTAATTCCATCAATTCTGAGCAGCGTGACCGTCCTTGTGGTTGCA
ATACTCGTGGTCTGCTGGAAGCGTCCGAATAATGCGGTCGCGAACTCCAG
CACGACTACCGCTGTGGAGGACATGGGTATGGTGGGAAGTATCGTGGGCT
TGGCCCCCCAAAAGAACGAAGGTGCACCGCCAGCCTACACCCCCAGAGCA
AGTCCTGGAATGCCATCGGTGTCCATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000060 | genome | Sc0000060:923089..924798 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95561_evm1 |
| Biotype | protein_coding |
|
