|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95553_evm2 >transcript:BL95553_evm2-protein ID=transcript:BL95553_evm2-protein|Name=transcript:BL95553_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=160bp
MAILQVLVVTVLVAGSQAKSLVARQGLGNPNNCPQVCPFIFFPVCGSNGV
TYSNPCELEATACQQAALFSDQDNYKPLTMVHEAPCGTQNRKRQFDSDCP
MFCPEYYSPVCGSNGQTYDNICFLESAACRAGLNNPNAEPITVAHRGGCN
GEGIFPLLVS Run BLAST on NCBI mRNA from alignment at Sc0000058:1285935..1288169- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95553_evm2 ID=transcript:BL95553_evm2|Name=transcript:BL95553_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2235bp|location=Sequence derived from alignment at Sc0000058:1285935..1288169- (Branchiostoma lanceolatum)
ATGGCAATTCTGCAAGTGTTGGTTGTCACGGTCTTGGTAGCTGGTGAGGA
AATTATTACTCTTTGTATGGTCATGGAAATGCATCTATAAAACCATGATA
GAAATGCGACGAGAGACTTTTTTCGTTTTAATACCATTGATGGTTGCTTT
ACTTTTTAGCTACTTTGTGCAGTATAAATTTTGCTGTCGACTTATTCCGA
CTTTTAGGGGCCCCTTTCCTTGTTGCAAAAATGCTAAGGAGATGTGTTCA
CAAGTTGAAGCATTACGAAAATTTAGTCACAAATGAGAGCCAAAATCTAT
GGGAATTGTTACTGCTGGTCAAAGACGAACTTGATTGTGTGGATTACACC
ATCACCTTGATGTTCTAAAAAAATGGCATGGACATTTCTTAATTCCTAAT
ATAACAGTCCAGAGTTAACTAGAAGCATATTAAGTGGGCTGTTATCATAA
GAGGTAAAATGGCCTTATGAAGGTAGACTCTACCTGTCTATTTGGGTTGT
TGGAAAAAAATACTAGGAATTGGTCAAATAGAATGAATAAGTTGCAAGAA
GATTAAATATCTAGTCGGTCATAATGCTACACAAAGGCAACCTACGGTGT
AAAACGGCGCTACTAACTAACTCATTGGGCAAATACTTCAGCCTATTTGA
CAATTTTCTAACATTTTTCCAGCAACCCAAAGACTCTAGTAGAAAAGATC
ACATGGACATATATAGTGTAATTCACTTTATCTTCACGGTAGCAAAATTT
CACGGTGTAAGGATAATTGACATTTTTATTGAACGTTAACTTCACGGTGC
TGGTGGCAAGTGATTTAACGGACGGATGTGCGAAGGAATCATAAATAACT
ACAACAGGTTTTTCACGGTGTTGATAAGTTCATGGTACAGAGGTGACCGT
CAAAACAGTGAACATAAAGTTACAGTGAAAGAAACAAGAATTGCAGTATT
TACTCTCAATTTTCAGGGTCCCAGGCTAAGTCGCTGGTGGCCCGGCAGGG
TTTGGGAAACCCGAACAACTGTCCGCAGGTCTGTCCTTTTATTTTCTTCC
CGGTCTGTGGTTCAAACGGGGTGACCTACAGCAACCCATGCGAGCTGGAA
GCGACCGCCTGTCAACAGGCCGCACTGTGAGTATGAACGCACATTTTGCT
TCGGTGCGTCGGTCACAACTGCGCCGTTGCCCGTAGGGTGTATAGACCAG
GTCGGGCCCCTTATTCACAAGTTTGTCCCGGTGAACTGACGGTTATTTGT
CTCTCTGTGTTCTTATCTTATAATTAGCTTACGGCGTCAATTTTTTACCG
GGTCCTAAGTTGATTTTAAATCCGAGTTAAAAAAATCCAGGGGCCCGGCC
GAGCCGAAAAATAACTTGGTAGCCACACGGGGCCACGTAGGGGTCACGCC
CGAAGGGGGGAAACACAGCCCGTCAACTGACTGACGCATTTTTGCGCAGT
CCTGTGAGATACCCTCTTTAGGAATGTGTTTTGGCCAGTATGGTCCCAAC
AGTATCGCTAGCCCTGACCACCCTCCAATTGTATTACAGCAATCATCTTT
ATACTATACTCTACTGTTAGGTTCTCTGACCAGGATAACTACAAGCCCCT
GACGATGGTTCACGAGGCTCCGTGCGGGACCCAGAACCGCAAGCGGCAGT
TCGACTCCGACTGCCCGATGTTCTGTCCGGAGTACTACTCCCCTGTCTGC
GGCAGTAACGGGCAGACCTACGACAATATCTGTTTCCTGGAGAGCGCCGC
CTGCAGAGCTGGGTAAGTTCCAATAAACCAACATTTTACTTAAAAAACAT
CCAGCAGTATAGAAAGAAACCACTTTGATTCAGATATCTTCAGTAAACGA
GAAATGAGTTGAAATGCAGAATCTGTTTTTTGCCAACGCCCCAGGGGTGG
AGCCCTTTGTAAGCATAATGCGATCACATCTAAACATTTATTTGGCAATA
ATAATTATGTACATTTGTTTTGTTTCTTACTTAATTCTACAAGTATGCAC
TGACTAGAAACGGGCTTCTGCTGTTGTAGGCCCAATATAGGACTGGTGTA
GTTTGGGAGAATATATCTTAGATGTTCGCTTGATAAACGTTTTTTTCCAC
AACCGAGAAAGCATCTTTAGCAAGACTGACGCTTTGTTTCAATCCAGGTT
GAACAACCCCAACGCTGAGCCAATCACCGTGGCGCACAGAGGTGGCTGCA
ATGGAGAGGGAATCTTCCCTTTGTTGGTGTCCTAA Coding sequence (CDS) from alignment at Sc0000058:1285935..1288169- >transcript:BL95553_evm2 ID=transcript:BL95553_evm2|Name=transcript:BL95553_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=1932bp|location=Sequence derived from alignment at Sc0000058:1285935..1288169- (Branchiostoma lanceolatum)
ATGGCAATTCTGCAAGTGTTGGTTGTCACGGTCTTGGTAGCTGGGTCCCA
GGCTAAGTCGCTGGTGGCCCGGCAGGGTTTGGGAAACCCGAACAACTGTC
CGCAGGTCTGTCCTTTTATTTTCTTCCCGGTCTGTGGTTCAAACGGGGTG
ACCTACAGCAACCCATGCGAGCTGGAAGCGACCGCCTGTCAACAGGCCGC
ACTGTTCTCTGACCAGGATAACTACAAGCCCCTGACGATGGTTCACGAGG
CTCCGTGCGGGACCCAGAACCGCAAGCGGCAGTTCGACTCCGACTGCCCG
ATGTTCTGTCCGGAGTACTACTCCCCTGTCTGCGGCAGTAACGGGCAGAC
CTACGACAATATCTGTTTCCTGGAGAGCGCCGCCTGCAGAGCTGGGTTGA
ACAACCCCAACGCTGAGCCAATCACCGTGGCGCACAGAGGTGGCTGCAAT
GGAGAGGGAATCTTCCCTTTGTTGGTGTCCTAAATGGCAATTCTGCAAGT
GTTGGTTGTCACGGTCTTGGTAGCTGGGTCCCAGGCTAAGTCGCTGGTGG
CCCGGCAGGGTTTGGGAAACCCGAACAACTGTCCGCAGGTCTGTCCTTTT
ATTTTCTTCCCGGTCTGTGGTTCAAACGGGGTGACCTACAGCAACCCATG
CGAGCTGGAAGCGACCGCCTGTCAACAGGCCGCACTGTTCTCTGACCAGG
ATAACTACAAGCCCCTGACGATGGTTCACGAGGCTCCGTGCGGGACCCAG
AACCGCAAGCGGCAGTTCGACTCCGACTGCCCGATGTTCTGTCCGGAGTA
CTACTCCCCTGTCTGCGGCAGTAACGGGCAGACCTACGACAATATCTGTT
TCCTGGAGAGCGCCGCCTGCAGAGCTGGGTTGAACAACCCCAACGCTGAG
CCAATCACCGTGGCGCACAGAGGTGGCTGCAATGGAGAGGGAATCTTCCC
TTTGTTGGTGTCCTAAATGGCAATTCTGCAAGTGTTGGTTGTCACGGTCT
TGGTAGCTGGGTCCCAGGCTAAGTCGCTGGTGGCCCGGCAGGGTTTGGGA
AACCCGAACAACTGTCCGCAGGTCTGTCCTTTTATTTTCTTCCCGGTCTG
TGGTTCAAACGGGGTGACCTACAGCAACCCATGCGAGCTGGAAGCGACCG
CCTGTCAACAGGCCGCACTGTTCTCTGACCAGGATAACTACAAGCCCCTG
ACGATGGTTCACGAGGCTCCGTGCGGGACCCAGAACCGCAAGCGGCAGTT
CGACTCCGACTGCCCGATGTTCTGTCCGGAGTACTACTCCCCTGTCTGCG
GCAGTAACGGGCAGACCTACGACAATATCTGTTTCCTGGAGAGCGCCGCC
TGCAGAGCTGGGTTGAACAACCCCAACGCTGAGCCAATCACCGTGGCGCA
CAGAGGTGGCTGCAATGGAGAGGGAATCTTCCCTTTGTTGGTGTCCTAAA
TGGCAATTCTGCAAGTGTTGGTTGTCACGGTCTTGGTAGCTGGGTCCCAG
GCTAAGTCGCTGGTGGCCCGGCAGGGTTTGGGAAACCCGAACAACTGTCC
GCAGGTCTGTCCTTTTATTTTCTTCCCGGTCTGTGGTTCAAACGGGGTGA
CCTACAGCAACCCATGCGAGCTGGAAGCGACCGCCTGTCAACAGGCCGCA
CTGTTCTCTGACCAGGATAACTACAAGCCCCTGACGATGGTTCACGAGGC
TCCGTGCGGGACCCAGAACCGCAAGCGGCAGTTCGACTCCGACTGCCCGA
TGTTCTGTCCGGAGTACTACTCCCCTGTCTGCGGCAGTAACGGGCAGACC
TACGACAATATCTGTTTCCTGGAGAGCGCCGCCTGCAGAGCTGGGTTGAA
CAACCCCAACGCTGAGCCAATCACCGTGGCGCACAGAGGTGGCTGCAATG
GAGAGGGAATCTTCCCTTTGTTGGTGTCCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000058 | genome | Sc0000058:1285935..1288169 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95553_evm2 |
| Biotype | protein_coding |
|
