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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95520_evm0 >transcript:BL95520_evm0-protein ID=transcript:BL95520_evm0-protein|Name=transcript:BL95520_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=364bp
MLLTVVFSLVLSLVSGQVDVQVRLADGGPNYGRVEVLYGGTWGTVCDDNF
AKEDADVVCRDLGFPDATDFYNDAFFGPGAQSMPVWLDEVGCKGYESSLK
FCPHDGWGVTNCGHAEDVSVRCLECATVRISGSTTYQLTSMGTYTMTGQI
SENRPVYAINSGTNTYLHYIEAASAWCVGPTLGVRLCGIEFADTSAYANE
ITGTVEVFTGTPGQWVVSPQVQISCETVTGTTIDCTFDDDTCGYIAGHKT
TNFTWTQMRGPTPSSGTGPGWDYPTGQVIINIIININTTITTTIIIIIII
IIIIIIIIIIIIIIIIIIIFLLLLIIIIIVITITITIFIIIIIITTNVII
FTIIIIFVSIHICC Run BLAST on NCBI mRNA from alignment at Sc0000054:521063..523948- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95520_evm0 ID=transcript:BL95520_evm0|Name=transcript:BL95520_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2886bp|location=Sequence derived from alignment at Sc0000054:521063..523948- (Branchiostoma lanceolatum)
ATGTTGCTAACCGTGGTGTTCTCGCTGGTTCTTTCCCTGGTTTCGGGTCA
AGTCGGTAAGAAATTTTTGTTTATTTATTTATTTATTGTTCTAAATACAA
CTTAAGCATGGCGTAATTTTTCAAGAAAAATCATTTAGATTTTCCAATAC
TATTTCATGAGATATACCCAAGGAGTAGTAATTGTTTTGATACCATGATT
ATGTAATAGTTTCATTTCTTACTCTCGGTATGACTTCAATGAAGATAGTG
AACAGCTTTGAAAACATGACAGCTTTAGCTTTTTTGCAAAATCTGTAATA
CTTTTAAATCTGTAATTAACTTAAGAAAGACACTGCAGACTTGCAATCTT
TAGTGAATTGAATGTTGCAGTACGGTGTTAGCTTAAACCCTCATAACAAT
GCTAGTATACCTCAGAAAGGGGAGTGAGCTATTCAGCATGATAACAAAAT
TAATGCTTTTGATAAAAATGATTTTCTTTTTGACAAACAAAAGAAATCCT
ATTTTCTCATTCTAAACGCGTAACAGCCGAAAATTAAGATAATAGAAAAC
GATTTCTAGATCAACACTTATCAGTGGTTAATCAAACTTGTGGTGCGTAT
GTCTCGCCCCTTTATCCATATGCATATATCCATCATTCAAAATCCATATA
CTGATGATATTTGTAGCACTGAATATCTAATGTACTGTGTCGAATTTAGA
CATATTTTCAAACACAACATTGTCACTTTATTGATTCGAATATAAACAAA
CAAACAAACAAACAAACAAACAAATCGAACTTCTTTCATTTGCCAGATGT
CCAGGTGCGTTTGGCGGACGGTGGGCCTAACTACGGGCGGGTGGAAGTTC
TGTACGGCGGCACCTGGGGGACCGTCTGTGACGACAACTTTGCCAAAGAG
GACGCCGACGTCGTCTGTCGGGACCTGGGCTTCCCAGATGCCACTGACTT
TTACAACGACGCCTTCTTCGGTCCGGGCGCGCAGAGCATGCCGGTATGGC
TGGATGAGGTGGGGTGTAAGGGTTACGAGAGTTCGCTGAAGTTCTGTCCG
CATGACGGCTGGGGCGTCACCAACTGCGGCCACGCCGAGGACGTCAGCGT
CAGGTGTTTGGGTACGTGTTTCTCTCTTGGTATAAACATGTCACAATTCA
TGTCTGCATTGACATTGAAAACCACTTTTCTAACTTTTTAAAATATATCA
ATCTGTTGCAAATTCAGAAGAAAACCTTAATGAACGACGATCTTTATTGT
TGCTTTTCAATCTACACACACACACACACATCCATCGATCCATCGATCCA
TCGATCCATCGATCCATCCATCCATCCATCCATCCATCCATCCATCCATC
CATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA
TCCATCCATCCATCCATCCATCCATCCATCCATCCAACCATCCAACTAAC
CATTCGTTAATTCCCACCAGAATGTGCGACAGTCCGGATATCCGGTTCCA
CCACGTACCAGTTGACCTCCATGGGCACCTACACCATGACGGGACAGATA
TCCGAAAACCGTCCTGTCTACGCCATCAACTCCGGAACCAACACCTACCT
GCACTACATCGAGGCCGCCTCCGCCTGGTGCGTTGGGCCCACCCTGGGAG
TGCGCCTGTGCGGGATAGAGTTTGCCGACACGAGTGCTTACGCAAACGAG
ATCACCGGGACGGTGGAGGTGTTCACCGGGACCCCCGGCCAGTGGGTGGT
CTCGCCACAGGTTCAGATCAGCTGCGAAAGTGGGTGCTTTTGTAAATTAT
TACCTTTATTCAAAAGAAATACAATTCACCGCATAGATCGACATTTATTA
GAATTTTCACCCACTTTCCTGACACTTGACCCCCTTTCCCGACATGTGCT
GATCTTAGAGACGTGTGACATAAGGAGTGGGTCAAAGGTCTCCAGAAGTC
TATATCTGCCCCCGCCCGATTTCATGTAGCTAGATGTGCCTTGATGGATA
TTTGACCTCTTTTTGCTTAATACTTTGTACCGTAGGTTATTGTTGATTGG
GCTATTCTATATATATTTATGTTAAAGTTTTTGTTGTTTGAAATAATTAT
TGTTCTGATTCTGTATCAAGATGAATAGAATCTATGGAAATATTTTTACA
ACTTACTAACCTGGATTTGCTACGACGGAAATCTACGGGTAAATTCTATC
AAAAAGTTTAATTATGAAATGTAATTAATCTACGACTTATTCTTGAAGAA
CCAAATCAAATGAGGAACTCGACATTAAACATGCTTTCAACCTTGCCCTA
ACTGACCCCTCCAGCCGTGACGGGTACCACCATAGACTGCACCTTCGATG
ATGACACCTGTGGCTACATCGCTGGCCACAAGACCACAAACTTCACCTGG
ACACAGATGCGTGGTCCTACTCCGTCCAGCGGGACTGGACCTGGCTGGGA
CTACCCAACTGGACAAGGTACATACATCTTATTGCGTTACTTCATGTATG
ATACTGAATTTAGCATGGGTTGCCAGTTCATCACCATCCTAACAATTATC
ATCATAATCTTAATCTTTATCATCATCATTATCATTATCATCATTATCAT
AAACATTATTATCACAATCATAGTCATCATCAACATCATCATAAACATCA
ATACCACCATCACCACCACCATCATTATTATCATCATCATCATAATCATC
ATTATCATCATCATTATCATCATCATAATCATCATTATCATCATCATTTT
CCTCCTCCTCCTCATCATCATCATCATCGTCATCACCATCACAATCACTA
TCTTCATCATCATCATCATCATTACCACCAACGTCATCATCTTCACCATC
ATCATTATCTTTGTCTCTATTCACATATGCTGCTAA Coding sequence (CDS) from alignment at Sc0000054:521063..523948- >transcript:BL95520_evm0 ID=transcript:BL95520_evm0|Name=transcript:BL95520_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5475bp|location=Sequence derived from alignment at Sc0000054:521063..523948- (Branchiostoma lanceolatum)
ATGTTGCTAACCGTGGTGTTCTCGCTGGTTCTTTCCCTGGTTTCGGGTCA
AGTCGATGTCCAGGTGCGTTTGGCGGACGGTGGGCCTAACTACGGGCGGG
TGGAAGTTCTGTACGGCGGCACCTGGGGGACCGTCTGTGACGACAACTTT
GCCAAAGAGGACGCCGACGTCGTCTGTCGGGACCTGGGCTTCCCAGATGC
CACTGACTTTTACAACGACGCCTTCTTCGGTCCGGGCGCGCAGAGCATGC
CGGTATGGCTGGATGAGGTGGGGTGTAAGGGTTACGAGAGTTCGCTGAAG
TTCTGTCCGCATGACGGCTGGGGCGTCACCAACTGCGGCCACGCCGAGGA
CGTCAGCGTCAGGTGTTTGGAATGTGCGACAGTCCGGATATCCGGTTCCA
CCACGTACCAGTTGACCTCCATGGGCACCTACACCATGACGGGACAGATA
TCCGAAAACCGTCCTGTCTACGCCATCAACTCCGGAACCAACACCTACCT
GCACTACATCGAGGCCGCCTCCGCCTGGTGCGTTGGGCCCACCCTGGGAG
TGCGCCTGTGCGGGATAGAGTTTGCCGACACGAGTGCTTACGCAAACGAG
ATCACCGGGACGGTGGAGGTGTTCACCGGGACCCCCGGCCAGTGGGTGGT
CTCGCCACAGGTTCAGATCAGCTGCGAAACCGTGACGGGTACCACCATAG
ACTGCACCTTCGATGATGACACCTGTGGCTACATCGCTGGCCACAAGACC
ACAAACTTCACCTGGACACAGATGCGTGGTCCTACTCCGTCCAGCGGGAC
TGGACCTGGCTGGGACTACCCAACTGGACAAGTCATCATCAACATCATCA
TAAACATCAATACCACCATCACCACCACCATCATTATTATCATCATCATC
ATAATCATCATTATCATCATCATTATCATCATCATAATCATCATTATCAT
CATCATTTTCCTCCTCCTCCTCATCATCATCATCATCGTCATCACCATCA
CAATCACTATCTTCATCATCATCATCATCATTACCACCAACGTCATCATC
TTCACCATCATCATTATCTTTGTCTCTATTCACATATGCTGCTAAATGTT
GCTAACCGTGGTGTTCTCGCTGGTTCTTTCCCTGGTTTCGGGTCAAGTCG
ATGTCCAGGTGCGTTTGGCGGACGGTGGGCCTAACTACGGGCGGGTGGAA
GTTCTGTACGGCGGCACCTGGGGGACCGTCTGTGACGACAACTTTGCCAA
AGAGGACGCCGACGTCGTCTGTCGGGACCTGGGCTTCCCAGATGCCACTG
ACTTTTACAACGACGCCTTCTTCGGTCCGGGCGCGCAGAGCATGCCGGTA
TGGCTGGATGAGGTGGGGTGTAAGGGTTACGAGAGTTCGCTGAAGTTCTG
TCCGCATGACGGCTGGGGCGTCACCAACTGCGGCCACGCCGAGGACGTCA
GCGTCAGGTGTTTGGAATGTGCGACAGTCCGGATATCCGGTTCCACCACG
TACCAGTTGACCTCCATGGGCACCTACACCATGACGGGACAGATATCCGA
AAACCGTCCTGTCTACGCCATCAACTCCGGAACCAACACCTACCTGCACT
ACATCGAGGCCGCCTCCGCCTGGTGCGTTGGGCCCACCCTGGGAGTGCGC
CTGTGCGGGATAGAGTTTGCCGACACGAGTGCTTACGCAAACGAGATCAC
CGGGACGGTGGAGGTGTTCACCGGGACCCCCGGCCAGTGGGTGGTCTCGC
CACAGGTTCAGATCAGCTGCGAAACCGTGACGGGTACCACCATAGACTGC
ACCTTCGATGATGACACCTGTGGCTACATCGCTGGCCACAAGACCACAAA
CTTCACCTGGACACAGATGCGTGGTCCTACTCCGTCCAGCGGGACTGGAC
CTGGCTGGGACTACCCAACTGGACAAGTCATCATCAACATCATCATAAAC
ATCAATACCACCATCACCACCACCATCATTATTATCATCATCATCATAAT
CATCATTATCATCATCATTATCATCATCATAATCATCATTATCATCATCA
TTTTCCTCCTCCTCCTCATCATCATCATCATCGTCATCACCATCACAATC
ACTATCTTCATCATCATCATCATCATTACCACCAACGTCATCATCTTCAC
CATCATCATTATCTTTGTCTCTATTCACATATGCTGCTAAATGTTGCTAA
CCGTGGTGTTCTCGCTGGTTCTTTCCCTGGTTTCGGGTCAAGTCGATGTC
CAGGTGCGTTTGGCGGACGGTGGGCCTAACTACGGGCGGGTGGAAGTTCT
GTACGGCGGCACCTGGGGGACCGTCTGTGACGACAACTTTGCCAAAGAGG
ACGCCGACGTCGTCTGTCGGGACCTGGGCTTCCCAGATGCCACTGACTTT
TACAACGACGCCTTCTTCGGTCCGGGCGCGCAGAGCATGCCGGTATGGCT
GGATGAGGTGGGGTGTAAGGGTTACGAGAGTTCGCTGAAGTTCTGTCCGC
ATGACGGCTGGGGCGTCACCAACTGCGGCCACGCCGAGGACGTCAGCGTC
AGGTGTTTGGAATGTGCGACAGTCCGGATATCCGGTTCCACCACGTACCA
GTTGACCTCCATGGGCACCTACACCATGACGGGACAGATATCCGAAAACC
GTCCTGTCTACGCCATCAACTCCGGAACCAACACCTACCTGCACTACATC
GAGGCCGCCTCCGCCTGGTGCGTTGGGCCCACCCTGGGAGTGCGCCTGTG
CGGGATAGAGTTTGCCGACACGAGTGCTTACGCAAACGAGATCACCGGGA
CGGTGGAGGTGTTCACCGGGACCCCCGGCCAGTGGGTGGTCTCGCCACAG
GTTCAGATCAGCTGCGAAACCGTGACGGGTACCACCATAGACTGCACCTT
CGATGATGACACCTGTGGCTACATCGCTGGCCACAAGACCACAAACTTCA
CCTGGACACAGATGCGTGGTCCTACTCCGTCCAGCGGGACTGGACCTGGC
TGGGACTACCCAACTGGACAAGTCATCATCAACATCATCATAAACATCAA
TACCACCATCACCACCACCATCATTATTATCATCATCATCATAATCATCA
TTATCATCATCATTATCATCATCATAATCATCATTATCATCATCATTTTC
CTCCTCCTCCTCATCATCATCATCATCGTCATCACCATCACAATCACTAT
CTTCATCATCATCATCATCATTACCACCAACGTCATCATCTTCACCATCA
TCATTATCTTTGTCTCTATTCACATATGCTGCTAAATGTTGCTAACCGTG
GTGTTCTCGCTGGTTCTTTCCCTGGTTTCGGGTCAAGTCGATGTCCAGGT
GCGTTTGGCGGACGGTGGGCCTAACTACGGGCGGGTGGAAGTTCTGTACG
GCGGCACCTGGGGGACCGTCTGTGACGACAACTTTGCCAAAGAGGACGCC
GACGTCGTCTGTCGGGACCTGGGCTTCCCAGATGCCACTGACTTTTACAA
CGACGCCTTCTTCGGTCCGGGCGCGCAGAGCATGCCGGTATGGCTGGATG
AGGTGGGGTGTAAGGGTTACGAGAGTTCGCTGAAGTTCTGTCCGCATGAC
GGCTGGGGCGTCACCAACTGCGGCCACGCCGAGGACGTCAGCGTCAGGTG
TTTGGAATGTGCGACAGTCCGGATATCCGGTTCCACCACGTACCAGTTGA
CCTCCATGGGCACCTACACCATGACGGGACAGATATCCGAAAACCGTCCT
GTCTACGCCATCAACTCCGGAACCAACACCTACCTGCACTACATCGAGGC
CGCCTCCGCCTGGTGCGTTGGGCCCACCCTGGGAGTGCGCCTGTGCGGGA
TAGAGTTTGCCGACACGAGTGCTTACGCAAACGAGATCACCGGGACGGTG
GAGGTGTTCACCGGGACCCCCGGCCAGTGGGTGGTCTCGCCACAGGTTCA
GATCAGCTGCGAAACCGTGACGGGTACCACCATAGACTGCACCTTCGATG
ATGACACCTGTGGCTACATCGCTGGCCACAAGACCACAAACTTCACCTGG
ACACAGATGCGTGGTCCTACTCCGTCCAGCGGGACTGGACCTGGCTGGGA
CTACCCAACTGGACAAGTCATCATCAACATCATCATAAACATCAATACCA
CCATCACCACCACCATCATTATTATCATCATCATCATAATCATCATTATC
ATCATCATTATCATCATCATAATCATCATTATCATCATCATTTTCCTCCT
CCTCCTCATCATCATCATCATCGTCATCACCATCACAATCACTATCTTCA
TCATCATCATCATCATTACCACCAACGTCATCATCTTCACCATCATCATT
ATCTTTGTCTCTATTCACATATGCTGCTAAATGTTGCTAACCGTGGTGTT
CTCGCTGGTTCTTTCCCTGGTTTCGGGTCAAGTCGATGTCCAGGTGCGTT
TGGCGGACGGTGGGCCTAACTACGGGCGGGTGGAAGTTCTGTACGGCGGC
ACCTGGGGGACCGTCTGTGACGACAACTTTGCCAAAGAGGACGCCGACGT
CGTCTGTCGGGACCTGGGCTTCCCAGATGCCACTGACTTTTACAACGACG
CCTTCTTCGGTCCGGGCGCGCAGAGCATGCCGGTATGGCTGGATGAGGTG
GGGTGTAAGGGTTACGAGAGTTCGCTGAAGTTCTGTCCGCATGACGGCTG
GGGCGTCACCAACTGCGGCCACGCCGAGGACGTCAGCGTCAGGTGTTTGG
AATGTGCGACAGTCCGGATATCCGGTTCCACCACGTACCAGTTGACCTCC
ATGGGCACCTACACCATGACGGGACAGATATCCGAAAACCGTCCTGTCTA
CGCCATCAACTCCGGAACCAACACCTACCTGCACTACATCGAGGCCGCCT
CCGCCTGGTGCGTTGGGCCCACCCTGGGAGTGCGCCTGTGCGGGATAGAG
TTTGCCGACACGAGTGCTTACGCAAACGAGATCACCGGGACGGTGGAGGT
GTTCACCGGGACCCCCGGCCAGTGGGTGGTCTCGCCACAGGTTCAGATCA
GCTGCGAAACCGTGACGGGTACCACCATAGACTGCACCTTCGATGATGAC
ACCTGTGGCTACATCGCTGGCCACAAGACCACAAACTTCACCTGGACACA
GATGCGTGGTCCTACTCCGTCCAGCGGGACTGGACCTGGCTGGGACTACC
CAACTGGACAAGTCATCATCAACATCATCATAAACATCAATACCACCATC
ACCACCACCATCATTATTATCATCATCATCATAATCATCATTATCATCAT
CATTATCATCATCATAATCATCATTATCATCATCATTTTCCTCCTCCTCC
TCATCATCATCATCATCGTCATCACCATCACAATCACTATCTTCATCATC
ATCATCATCATTACCACCAACGTCATCATCTTCACCATCATCATTATCTT
TGTCTCTATTCACATATGCTGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000054 | genome | Sc0000054:521063..523948 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95520_evm0 |
| Biotype | protein_coding |
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