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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95512_evm6 >transcript:BL95512_evm6-protein ID=transcript:BL95512_evm6-protein|Name=transcript:BL95512_evm6|organism=Branchiostoma lanceolatum|type=polypeptide|length=246bp
MAVSAAHFRNLDSSLDSLKKCSKYVLTGMEFASEVALDVQEMTANEDQVQ
EVEDVMVEYAAMERDLNQFVEAVETVKHQLKSGELSDHVAVEKALSEQLE
VGQQGNSKEQLLQHEMITSLHEKLRELKGEEETAPSPQPGGSQAGGDDDD
DDIQMTQTEDNLKCPFTQQEFKEPVKNKKCGHVYEKGPIIQHIRRKKGVK
CPVGACANTDPLSEQDLEDDSETRRKIQKKNRQAGRKEARNRDMPF Run BLAST on NCBI mRNA from alignment at Sc0000050:227215..231561- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95512_evm6 ID=transcript:BL95512_evm6|Name=transcript:BL95512_evm6|organism=Branchiostoma lanceolatum|type=mRNA|length=4347bp|location=Sequence derived from alignment at Sc0000050:227215..231561- (Branchiostoma lanceolatum)
CGATAGATATCATATGATCTTCTCACATATAAAACAGAAACGCTTTTGGG
AAAGCAGCTTGCAACATCACCTACTTCACCGTCCGCGAGCGCCCTCTCGC
GGTTTAGTTCATAAGTGAAATGAAAGCTATTATCGTAAGGTCTCGCGAGA
CGTAGCCATTTTGCCGCGAAATTTAGTGCTCCGGCTTGGGAGCGCACAAC
TTTCGAAACTCTCAGAATTTACACCGTTTTCTGCGTTTTTGTGGACAGAT
CGAGCGTCTTCTAGGATTGAAGCTATCTTCCTTACATTCTCAAGATTACG
TAGGACCTTTGAGGCACCAGGGTTGGCGTCGGAGAAAGAGAAATCGAACA
AAAAGCAAAGGTAAAGTTTTGTTGGTTTTCTATGAATGAATAAATAATTT
AGGAACGTGCCTCGGTAGTGGCTCTTATTTCTTTTTGAAGTTTTCTAAAT
GAACCATTGCCCTACATGATATTTTAAATGATGTATGATAAGCACAATGC
AGCATTGATATCCTGTGTGAGTGCTGCTTTTTTTGTCTCTGGCAGCCTGG
GACTGGAATGGTCTCAAAGCAGTGTGGGCACCAAGGGGGTGAAGTCTGCC
ATCTCTGATAAATATTTGCTCTGTGGTAGTGTTACTAATTATCCTACTCT
CCCCTCATTCGTCAGATGATATAAGTATGGCGGTGAGCATGGCCCAGTTC
TCTAACACGGACTGCTTGTTTGTTTTGCCACAATGATTTTGCAACTGGTA
ATATGCTACTCCCCCATGCAGACCCTCATCAGTATGGTAAAGAGGGCTGT
GCACTTCCGTAACCTGGACAGCTCACTCGCTTGTTTGTTTGTTTTGCAGA
TCGCTGGTTTGTTTTGTAGTAACTAGTTACATGTTAACCCCATGCAGATC
ATCATCCTCCTCAAAATGGCGGTGAGCGCAGCACACTTTCGTAACCTGGA
CTCCTCGCTGGACAGTCTGAAGAAATGCTCCAAGTACGTCCTGACCGGGA
TGGAGTTCGCCTCCGAGGTCGCGCTCGATGTGCAGGAGATGACAGGTTTG
TTTGTTTGTTTTGCATAACTGGTAAACTGCCTCAAAATACAACATGTGTC
TAGTGTTGTACTTTGCTAATTGCAAGTTGCATAGATAGAAACAGAAAAGC
GATCCTTTACGGGGAGTGGTAGTGTTCATTTTTTGCTCTGAATACAGCTT
GCCTCTTGTACATGTATAAATGTTATAAAAAAACATAAAAAAACTAATGC
TCACAGCAACCTCTCCATCCCGAATTCATGACACCGTGTTTCAATTGTAC
CACTACTGTACTACAGAATAGTTCCAACCACAAACTTAAAAAAATGCTGC
GACAACCTTGCCTCTACTAACATGAAACTAATTTGGTCCCCTCTAAATGA
GATACATGTAGATTAACATTATGCATGTGTCAGGTCAAATTTCTGAGATC
TCAAGTTCGACCGTCTTGTTTACTCCGCAGCCAATGAGGATCAGGTTCAG
GAAGTGGAGGATGTGATGGTGGAGTATGCGGCGATGGAGCGAGATCTGAA
CCAGTTTGTTGAGGCGGTGGAGACCGTCAAACACCAGGTCAGACTTGTGG
TCAGAACACTTCTGGTCCTTTGTTGATACAGTAGTAGCATGAGAGTAGTC
CAGTGGTTTGTGACTCTACCTCTGGACCAAGAAGTCATGAGTTTGAATCC
CGGCTGTGTTGCTCAGCTGAAATACACGCTATTGTCAGATTTACAGCTCA
AGTTGCAGGAGAAGGCATCAAACTGCAATTTAGAAGGGCAAAATGCGACA
GCGCACCCTCAGTAAAAAGATGGGAGCACCGCTACCTTAAAAATTTCTGG
GGAGAGCCCTGACGTTAAGTCATGGTCCGCTGTTCAATGTACTTGTCAAA
AAGAGCTAGGGGAATTTCCCTGTACAATGAACCTGTAAATACTCCTCTTT
ACTTACATGTAATGATCATGTATATGTTTCATATTCAGACTACTGGCAAG
TTTTAAGGGGCTTGGTCTTGCTTTTACCAACAATACAAAACAAAACATAA
GGTCACTCATATCATAAATCTTTTAACTTTTTCAGAATAACATAACATTG
ATATGTTTTCAAGTTTAACAAAGTAAATGATACAACGCTTACCCGGTGCT
ACCTGATGTTGCCATATGTCTGCTGACTGCAAAAGATTTTAATTTCAGAA
AATGAGGGAATGGCAATTTCCTAACATCTGTGTTCTTTTGTTGTAGCTGA
AAAGTGGTGAGTTGTCCGACCATGTAGCTGTGGAGAAGGCTCTGAGTGAA
CAGCTGGAGGTTGGACAGCAGGGGAACAGCAAGGAACAGCTGTTACAGCA
TGAAATGATCACCTCGCTACATGAAAAACTCAGGGAGCTCAAGGGTAGGT
GTTGTTTTTGTTTCAATCACACTCAGTGCAAGGCGTAGGGGGCCACTCCT
CTAAGCACCGCCTAATTGTTACTGTAGCAGCATCTCTTCACCCTAGGTCA
GAAACATCAATGCTTGAGACAAGCATGACTTCACTGACCCATTAAGAGAA
GCAGGGGTTACGAAGGCTGCTTCGAAAATTCCCTACCCCATTTATTATAA
ACTTCAAGTTGGCAATTTTTTTTTTTGTTGGTTTGAGGTTTAAAAGTCAA
AGCACAGAAAAAGAAAAGAAAGTGAAGAAACTCCTTCACGTAGTGCTACA
ACTCTGCATGTACATTGTACAATGCCACAGAGGTCAATCATTTTAACCCT
CTAACTACTGCCTAACTTTGTAACCAATAGGGAATTTGGTGCCAAACAGC
TACTTCAGAGTGCTAAAGGTTAAACACGGAAGTATACCCAAAAGAAAGGT
TTGACTTTGAGCCCCATATTACTTTTCACCAGAAAGTAGTCCAGTGGTTA
GCAACCCTGCCTCTGGAACAAGAGGCTGCAAGTTCGAGTTCCGGCTGTGT
CGCTCACCCGACCTGATGCATGCTACTGGAAAGAATTGCAGTCCTTAGGA
CGGGACATTATGCCGTGGTCCACTGTTCATTGTACTTGTTCTAAAGAGCT
TCACCAAAAACACACCACTTCTTACACTTTTTGCCCATTGTAGTATTTTA
TCATTTTGCTGCAGATTGCAAGTGAAGTCTCATCTTTTTTAAATTTCAGG
TGAGGAAGAAACAGCGCCATCTCCTCAGCCTGGAGGTTCCCAGGCGGGAG
GCGACGATGATGACGATGACATCCAGATGACCCAGACCGAGGACAACCTG
AAGTGCCCTTTCACCCAGCAGGAGTTCAAGGAACCCGTGAAGAACAAGAA
GTGTGGCCACGTTTACGAGAAGGGGCCGATTATTCAACACATCCGCAGGA
AGAAAGGGGTCAAGTAAGAACAAGTTTATCCTAAGTTCTTCTGTGTTAGT
AATTTGACATTATGGATGAAGATTGAACCTTACAAAACCAACACTTAGAA
GAATTTGGAGTTACCTAAAAAACATTTGGCTGACGGAATGGACCAATCTA
CTTCTACTTCCGAGAGGGGATGTTGGAAACATATGACTGCAGCAACTGGT
CGTAAGGGGAATGAAGGAAGCAGGTTACATTCGAGCCGACCGTCCAACGT
TAAGCGTTAAACAGAGATGGGTTAACATAGGTTATCTGTCACTTACGGCC
CATTGCAGTTAGTTGCTAGTGGTAAGATCAATAAGTAATTGAATAGTTGG
TGATTTTTCATTCTCGTTGTATCTTTATCACTTCTTATCATCTCATTCTT
ATTTATCAGAGGAGCAGCCTGAAGCTAGAACAGGATGAATACCAGGCTAG
TATTGGTTAGAAGCCAGCCCTGATTGTCCTGTTTTGTTGCTTCAGATGTC
CAGTTGGAGCGTGTGCGAACACAGACCCTCTCAGTGAACAGGACTTAGAA
GACGACTCGGAGACGAGGAGAAAAATCCAGAAGAAGAACAGACAGGCAGG
GAGGAAGGAGGCACGGAACAGAGACATGCCCTTCTAGTGTCGGTGTCGTC
TGCCTTGGTTTTGTTTTTTTATTGTTCGCCTGTAGTGCCTAGCAAGTTTC
CTTGAAGTTTCAATAACAGGGTATTTTTTTACATGGAGAAGATGCAAGCC
CTGGTCACCTCCTTGAACACAGGACACTCATTTTACGTCCCTAATGAAAG
ACGGGCGCTGCCCCAACCAAGATAACCTTCCCAGGATTCAATCCTGGGTC
TCCCTGAGTTACCAACTAGTTGGAACCAGGAGCTCAGCTTTGACACTGTT
ACCAGTTGAGCTACAGGTACTTCCCTCTTGGTTTTGTCTATTTCATTTTG
GAAAAAAAGGAGATAGTAAACGAATTAGGGAGATGACAAAAACCAAA Coding sequence (CDS) from alignment at Sc0000050:227215..231561- >transcript:BL95512_evm6 ID=transcript:BL95512_evm6|Name=transcript:BL95512_evm6|organism=Branchiostoma lanceolatum|type=CDS|length=3705bp|location=Sequence derived from alignment at Sc0000050:227215..231561- (Branchiostoma lanceolatum)
ATGGCGGTGAGCGCAGCACACTTTCGTAACCTGGACTCCTCGCTGGACAG
TCTGAAGAAATGCTCCAAGTACGTCCTGACCGGGATGGAGTTCGCCTCCG
AGGTCGCGCTCGATGTGCAGGAGATGACAGCCAATGAGGATCAGGTTCAG
GAAGTGGAGGATGTGATGGTGGAGTATGCGGCGATGGAGCGAGATCTGAA
CCAGTTTGTTGAGGCGGTGGAGACCGTCAAACACCAGCTGAAAAGTGGTG
AGTTGTCCGACCATGTAGCTGTGGAGAAGGCTCTGAGTGAACAGCTGGAG
GTTGGACAGCAGGGGAACAGCAAGGAACAGCTGTTACAGCATGAAATGAT
CACCTCGCTACATGAAAAACTCAGGGAGCTCAAGGGTGAGGAAGAAACAG
CGCCATCTCCTCAGCCTGGAGGTTCCCAGGCGGGAGGCGACGATGATGAC
GATGACATCCAGATGACCCAGACCGAGGACAACCTGAAGTGCCCTTTCAC
CCAGCAGGAGTTCAAGGAACCCGTGAAGAACAAGAAGTGTGGCCACGTTT
ACGAGAAGGGGCCGATTATTCAACACATCCGCAGGAAGAAAGGGGTCAAA
TGTCCAGTTGGAGCGTGTGCGAACACAGACCCTCTCAGTGAACAGGACTT
AGAAGACGACTCGGAGACGAGGAGAAAAATCCAGAAGAAGAACAGACAGG
CAGGGAGGAAGGAGGCACGGAACAGAGACATGCCCTTCTAGATGGCGGTG
AGCGCAGCACACTTTCGTAACCTGGACTCCTCGCTGGACAGTCTGAAGAA
ATGCTCCAAGTACGTCCTGACCGGGATGGAGTTCGCCTCCGAGGTCGCGC
TCGATGTGCAGGAGATGACAGCCAATGAGGATCAGGTTCAGGAAGTGGAG
GATGTGATGGTGGAGTATGCGGCGATGGAGCGAGATCTGAACCAGTTTGT
TGAGGCGGTGGAGACCGTCAAACACCAGCTGAAAAGTGGTGAGTTGTCCG
ACCATGTAGCTGTGGAGAAGGCTCTGAGTGAACAGCTGGAGGTTGGACAG
CAGGGGAACAGCAAGGAACAGCTGTTACAGCATGAAATGATCACCTCGCT
ACATGAAAAACTCAGGGAGCTCAAGGGTGAGGAAGAAACAGCGCCATCTC
CTCAGCCTGGAGGTTCCCAGGCGGGAGGCGACGATGATGACGATGACATC
CAGATGACCCAGACCGAGGACAACCTGAAGTGCCCTTTCACCCAGCAGGA
GTTCAAGGAACCCGTGAAGAACAAGAAGTGTGGCCACGTTTACGAGAAGG
GGCCGATTATTCAACACATCCGCAGGAAGAAAGGGGTCAAATGTCCAGTT
GGAGCGTGTGCGAACACAGACCCTCTCAGTGAACAGGACTTAGAAGACGA
CTCGGAGACGAGGAGAAAAATCCAGAAGAAGAACAGACAGGCAGGGAGGA
AGGAGGCACGGAACAGAGACATGCCCTTCTAGATGGCGGTGAGCGCAGCA
CACTTTCGTAACCTGGACTCCTCGCTGGACAGTCTGAAGAAATGCTCCAA
GTACGTCCTGACCGGGATGGAGTTCGCCTCCGAGGTCGCGCTCGATGTGC
AGGAGATGACAGCCAATGAGGATCAGGTTCAGGAAGTGGAGGATGTGATG
GTGGAGTATGCGGCGATGGAGCGAGATCTGAACCAGTTTGTTGAGGCGGT
GGAGACCGTCAAACACCAGCTGAAAAGTGGTGAGTTGTCCGACCATGTAG
CTGTGGAGAAGGCTCTGAGTGAACAGCTGGAGGTTGGACAGCAGGGGAAC
AGCAAGGAACAGCTGTTACAGCATGAAATGATCACCTCGCTACATGAAAA
ACTCAGGGAGCTCAAGGGTGAGGAAGAAACAGCGCCATCTCCTCAGCCTG
GAGGTTCCCAGGCGGGAGGCGACGATGATGACGATGACATCCAGATGACC
CAGACCGAGGACAACCTGAAGTGCCCTTTCACCCAGCAGGAGTTCAAGGA
ACCCGTGAAGAACAAGAAGTGTGGCCACGTTTACGAGAAGGGGCCGATTA
TTCAACACATCCGCAGGAAGAAAGGGGTCAAATGTCCAGTTGGAGCGTGT
GCGAACACAGACCCTCTCAGTGAACAGGACTTAGAAGACGACTCGGAGAC
GAGGAGAAAAATCCAGAAGAAGAACAGACAGGCAGGGAGGAAGGAGGCAC
GGAACAGAGACATGCCCTTCTAGATGGCGGTGAGCGCAGCACACTTTCGT
AACCTGGACTCCTCGCTGGACAGTCTGAAGAAATGCTCCAAGTACGTCCT
GACCGGGATGGAGTTCGCCTCCGAGGTCGCGCTCGATGTGCAGGAGATGA
CAGCCAATGAGGATCAGGTTCAGGAAGTGGAGGATGTGATGGTGGAGTAT
GCGGCGATGGAGCGAGATCTGAACCAGTTTGTTGAGGCGGTGGAGACCGT
CAAACACCAGCTGAAAAGTGGTGAGTTGTCCGACCATGTAGCTGTGGAGA
AGGCTCTGAGTGAACAGCTGGAGGTTGGACAGCAGGGGAACAGCAAGGAA
CAGCTGTTACAGCATGAAATGATCACCTCGCTACATGAAAAACTCAGGGA
GCTCAAGGGTGAGGAAGAAACAGCGCCATCTCCTCAGCCTGGAGGTTCCC
AGGCGGGAGGCGACGATGATGACGATGACATCCAGATGACCCAGACCGAG
GACAACCTGAAGTGCCCTTTCACCCAGCAGGAGTTCAAGGAACCCGTGAA
GAACAAGAAGTGTGGCCACGTTTACGAGAAGGGGCCGATTATTCAACACA
TCCGCAGGAAGAAAGGGGTCAAATGTCCAGTTGGAGCGTGTGCGAACACA
GACCCTCTCAGTGAACAGGACTTAGAAGACGACTCGGAGACGAGGAGAAA
AATCCAGAAGAAGAACAGACAGGCAGGGAGGAAGGAGGCACGGAACAGAG
ACATGCCCTTCTAGATGGCGGTGAGCGCAGCACACTTTCGTAACCTGGAC
TCCTCGCTGGACAGTCTGAAGAAATGCTCCAAGTACGTCCTGACCGGGAT
GGAGTTCGCCTCCGAGGTCGCGCTCGATGTGCAGGAGATGACAGCCAATG
AGGATCAGGTTCAGGAAGTGGAGGATGTGATGGTGGAGTATGCGGCGATG
GAGCGAGATCTGAACCAGTTTGTTGAGGCGGTGGAGACCGTCAAACACCA
GCTGAAAAGTGGTGAGTTGTCCGACCATGTAGCTGTGGAGAAGGCTCTGA
GTGAACAGCTGGAGGTTGGACAGCAGGGGAACAGCAAGGAACAGCTGTTA
CAGCATGAAATGATCACCTCGCTACATGAAAAACTCAGGGAGCTCAAGGG
TGAGGAAGAAACAGCGCCATCTCCTCAGCCTGGAGGTTCCCAGGCGGGAG
GCGACGATGATGACGATGACATCCAGATGACCCAGACCGAGGACAACCTG
AAGTGCCCTTTCACCCAGCAGGAGTTCAAGGAACCCGTGAAGAACAAGAA
GTGTGGCCACGTTTACGAGAAGGGGCCGATTATTCAACACATCCGCAGGA
AGAAAGGGGTCAAATGTCCAGTTGGAGCGTGTGCGAACACAGACCCTCTC
AGTGAACAGGACTTAGAAGACGACTCGGAGACGAGGAGAAAAATCCAGAA
GAAGAACAGACAGGCAGGGAGGAAGGAGGCACGGAACAGAGACATGCCCT
TCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000050 | genome | Sc0000050:227215..231561 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95512_evm6 |
| Biotype | protein_coding |
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