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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95504_evm1 >transcript:BL95504_evm1-protein ID=transcript:BL95504_evm1-protein|Name=transcript:BL95504_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=318bp
MRSMPTGEDIRATGVPNPLAYVPTMTSRLSDQMTFLQRVKNVLVYFAFST
MGQLVFEKSYDDLAKRTIGDNFTISTALARTDVWLYQTDLMFDFPKPMMP
NMVSIAGHMAEDVKPLSEEMETFVKSSGDDGVVLVTFGSMVAAMPAEIAD
MLAAAFARLPQKVVWRYAGTPPPSLGSNTKTMEWVPQNALLAHPKTKAFV
SHCGYNGVAEAMYHGVPLVGMPLFADQSDNIARMVARGMAVSLDIHSVTS
EEVYQAITSVISDPGYKEKADQVSTHLRDQPQSPMERAVWWIEHVIKHGG
LPHLRSRAIELSFYQYYL Run BLAST on NCBI mRNA from alignment at Sc0000049:795269..797737- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95504_evm1 ID=transcript:BL95504_evm1|Name=transcript:BL95504_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2469bp|location=Sequence derived from alignment at Sc0000049:795269..797737- (Branchiostoma lanceolatum)
ATGAGGTCTATGCCTACGGGAGAAGGTGTGTGCATATTTTTACAGTGCAT
GCTAATCTTAATCCAACATAAACACTCACAACAAATGTTCGCAGACCACA
TAAGCACGTAAGCACAAAGGAAAATTTTACCTTGACGTAAATGATAAGAT
AAAACCTCCTTGATAAGAGAAAACTAACCACAAAAGAATTATGGCATTTT
CGCGTAAATTATGCAAATTAGGTCATCATTTTTGCAATTGGTATGTGTTT
ATGTCCAACCTACCATAAATTAATACATTACATGCGTTAGATTTCTATTA
TGAAAAACAATGAAATTGCCAAATTTATTCCTTAATTGTGCAAATCAATT
CCTAATTTGAATCTAATATTGTGCATATCTGCCTAAGCTATCTGCATGCC
AAATATAGAAATACGTCGTTCTCTGTCTGTTGCCTTATCTCGCTATGCCA
TGCTGGGAATTTTCCGGAGACATCTCTGATGGAATACATTTTAAATATTT
CCAAACTGTTATACTATTTTACTATGCATGTGTCTTTTGATCCTATTTTT
CAGACATCCGTGCCACTGGTGTCCCCAACCCTCTTGCTTACGTGCCAACA
ATGACATCGAGGTTGTCAGATCAGATGACATTTTTGCAGAGAGTGAAGAA
CGTGTTGGTTTACTTTGCATTTTCTACTATGGGACAGCTGGTCTTCGAAA
AGAGTTACGATGATCTTGCGAAAAGGTTCGGGCCGCGGTGTGTCAATACC
ATATCCGTACGTGCGCGCATGGCATGTTTAAAGGACAGTAGGTAGCTTGT
TATGTGGGTTTTCAAATTGCCCTCAAATTGAATTTTTTGTTTCAACATTG
ATCCTGTTACACTTGTCAAATGCTCAACAGTTTCATAGACATTCAAATCT
TTCAGGATTAGGGTGTAGCGCCATCCGCAAAACGGTAGTTAATGCAACTG
ATTGTACTTTCGATTCAATGCCCGTTAGAAATATACCTGTGATGCTAGAT
GACTGTAGGAGTACGTGTCTAATCTCTGGACTGCAAAGGTCCAAAACGGC
ATTCATCAGAAACACTATTTTTGCCACCAACAGAACCATTGGCGACAACT
TCACCATATCTACTGCCTTGGCAAGAACCGACGTGTGGCTCTATCAAACA
GATCTCATGTTCGACTTCCCTAAACCCATGATGCCAAATATGGTCAGCAT
AGCAGGTCACATGGCTGAGGACGTCAAGCCGCTCAGTGAGGTCAGTACCT
AGAAGAAAAACCGAGTAACGTTACATGGAAATGATCATTAGAATGATGAA
AAACACATTCTCTGTAAAATTACGATTGATTGTTAAATAGGATGTAAACT
TTAGATTCACAGCCAAGTTTTAAATTGCCACAAAGGCGCAAATCTAAATG
AAGGGTTCAGACATGGGTATACTGTCCTCGTCGTAACCATATATAGGAGA
TGGAGACATTTGTGAAGAGTTCTGGAGATGACGGTGTCGTCCTAGTAACG
TTTGGCTCCATGGTAGCGGCAATGCCCGCAGAGATAGCCGACATGCTGGC
CGCTGCTTTTGCTCGTCTACCGCAGAAGGTCGTGTGGCGCTACGCTGGGA
CGCCACCTCCAAGTCTGGGGTCCAACACCAAGACCATGGAGTGGGTGCCT
CAAAACGCCTTACTAGGTAAATGCTATTACTGTACTGAATAATGATGTGG
AATTCTTTAGACTTTTAGAATGTACGCCATCATATTGGCTTTCCTTAGTG
CGTGAAGATTTAGTGAAATTGTTCACATTGCCTGTGAGCCCTAATGATGG
CGATGAATAATCTAGCTAAGGTTGAATCTTTTCCTTTTGTTTCTATGCTG
CGATGAGCATACAATAAGATACATGAACTACTGTATCTCTTCCTTCTGGC
AATAACCGTTAGTCCTCCACAAAACAGCTCATCCAAAGACAAAGGCGTTT
GTATCACATTGTGGTTACAACGGAGTAGCAGAGGCCATGTACCACGGGGT
ACCGTTGGTCGGTATGCCTCTGTTCGCTGACCAATCTGACAACATCGCCC
GGATGGTGGCCCGTGGGATGGCGGTGTCACTGGACATTCACAGTGTGACG
TCAGAGGAGGTTTACCAGGCTATCACGTCCGTTATTTCGGATCCTGGGTA
CGTTTGAGGTGGAGTGACTTTCGGCAATAGCTTACTCAATTCTTGCCTCT
TTGTGTCTTTAAGTATGAGTGAAACATTATCCTTCTGAAGCAACTTTAGT
TCTTTATAACCAGCTGTGGCGTGTAACGTAATGGGCTGTGCTGAACTTTG
TTTCAGGTACAAGGAGAAAGCGGACCAAGTCTCCACGCATCTTCGTGACC
AACCACAGTCGCCCATGGAGCGGGCAGTATGGTGGATAGAACACGTCATC
AAACATGGTGGCCTCCCCCATCTCAGGTCGAGGGCGATCGAACTTTCGTT
CTACCAGTACTACTTGTAA Coding sequence (CDS) from alignment at Sc0000049:795269..797737- >transcript:BL95504_evm1 ID=transcript:BL95504_evm1|Name=transcript:BL95504_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5742bp|location=Sequence derived from alignment at Sc0000049:795269..797737- (Branchiostoma lanceolatum)
ATGAGGTCTATGCCTACGGGAGAAGACATCCGTGCCACTGGTGTCCCCAA
CCCTCTTGCTTACGTGCCAACAATGACATCGAGGTTGTCAGATCAGATGA
CATTTTTGCAGAGAGTGAAGAACGTGTTGGTTTACTTTGCATTTTCTACT
ATGGGACAGCTGGTCTTCGAAAAGAGTTACGATGATCTTGCGAAAAGAAC
CATTGGCGACAACTTCACCATATCTACTGCCTTGGCAAGAACCGACGTGT
GGCTCTATCAAACAGATCTCATGTTCGACTTCCCTAAACCCATGATGCCA
AATATGGTCAGCATAGCAGGTCACATGGCTGAGGACGTCAAGCCGCTCAG
TGAGGAGATGGAGACATTTGTGAAGAGTTCTGGAGATGACGGTGTCGTCC
TAGTAACGTTTGGCTCCATGGTAGCGGCAATGCCCGCAGAGATAGCCGAC
ATGCTGGCCGCTGCTTTTGCTCGTCTACCGCAGAAGGTCGTGTGGCGCTA
CGCTGGGACGCCACCTCCAAGTCTGGGGTCCAACACCAAGACCATGGAGT
GGGTGCCTCAAAACGCCTTACTAGCTCATCCAAAGACAAAGGCGTTTGTA
TCACATTGTGGTTACAACGGAGTAGCAGAGGCCATGTACCACGGGGTACC
GTTGGTCGGTATGCCTCTGTTCGCTGACCAATCTGACAACATCGCCCGGA
TGGTGGCCCGTGGGATGGCGGTGTCACTGGACATTCACAGTGTGACGTCA
GAGGAGGTTTACCAGGCTATCACGTCCGTTATTTCGGATCCTGGGTACAA
GGAGAAAGCGGACCAAGTCTCCACGCATCTTCGTGACCAACCACAGTCGC
CCATGGAGCGGGCAGTATGGTGGATAGAACACGTCATCAAACATGGTGGC
CTCCCCCATCTCAGGTCGAGGGCGATCGAACTTTCGTTCTACCAGTACTA
CTTGTAAATGAGGTCTATGCCTACGGGAGAAGACATCCGTGCCACTGGTG
TCCCCAACCCTCTTGCTTACGTGCCAACAATGACATCGAGGTTGTCAGAT
CAGATGACATTTTTGCAGAGAGTGAAGAACGTGTTGGTTTACTTTGCATT
TTCTACTATGGGACAGCTGGTCTTCGAAAAGAGTTACGATGATCTTGCGA
AAAGAACCATTGGCGACAACTTCACCATATCTACTGCCTTGGCAAGAACC
GACGTGTGGCTCTATCAAACAGATCTCATGTTCGACTTCCCTAAACCCAT
GATGCCAAATATGGTCAGCATAGCAGGTCACATGGCTGAGGACGTCAAGC
CGCTCAGTGAGGAGATGGAGACATTTGTGAAGAGTTCTGGAGATGACGGT
GTCGTCCTAGTAACGTTTGGCTCCATGGTAGCGGCAATGCCCGCAGAGAT
AGCCGACATGCTGGCCGCTGCTTTTGCTCGTCTACCGCAGAAGGTCGTGT
GGCGCTACGCTGGGACGCCACCTCCAAGTCTGGGGTCCAACACCAAGACC
ATGGAGTGGGTGCCTCAAAACGCCTTACTAGCTCATCCAAAGACAAAGGC
GTTTGTATCACATTGTGGTTACAACGGAGTAGCAGAGGCCATGTACCACG
GGGTACCGTTGGTCGGTATGCCTCTGTTCGCTGACCAATCTGACAACATC
GCCCGGATGGTGGCCCGTGGGATGGCGGTGTCACTGGACATTCACAGTGT
GACGTCAGAGGAGGTTTACCAGGCTATCACGTCCGTTATTTCGGATCCTG
GGTACAAGGAGAAAGCGGACCAAGTCTCCACGCATCTTCGTGACCAACCA
CAGTCGCCCATGGAGCGGGCAGTATGGTGGATAGAACACGTCATCAAACA
TGGTGGCCTCCCCCATCTCAGGTCGAGGGCGATCGAACTTTCGTTCTACC
AGTACTACTTGTAAATGAGGTCTATGCCTACGGGAGAAGACATCCGTGCC
ACTGGTGTCCCCAACCCTCTTGCTTACGTGCCAACAATGACATCGAGGTT
GTCAGATCAGATGACATTTTTGCAGAGAGTGAAGAACGTGTTGGTTTACT
TTGCATTTTCTACTATGGGACAGCTGGTCTTCGAAAAGAGTTACGATGAT
CTTGCGAAAAGAACCATTGGCGACAACTTCACCATATCTACTGCCTTGGC
AAGAACCGACGTGTGGCTCTATCAAACAGATCTCATGTTCGACTTCCCTA
AACCCATGATGCCAAATATGGTCAGCATAGCAGGTCACATGGCTGAGGAC
GTCAAGCCGCTCAGTGAGGAGATGGAGACATTTGTGAAGAGTTCTGGAGA
TGACGGTGTCGTCCTAGTAACGTTTGGCTCCATGGTAGCGGCAATGCCCG
CAGAGATAGCCGACATGCTGGCCGCTGCTTTTGCTCGTCTACCGCAGAAG
GTCGTGTGGCGCTACGCTGGGACGCCACCTCCAAGTCTGGGGTCCAACAC
CAAGACCATGGAGTGGGTGCCTCAAAACGCCTTACTAGCTCATCCAAAGA
CAAAGGCGTTTGTATCACATTGTGGTTACAACGGAGTAGCAGAGGCCATG
TACCACGGGGTACCGTTGGTCGGTATGCCTCTGTTCGCTGACCAATCTGA
CAACATCGCCCGGATGGTGGCCCGTGGGATGGCGGTGTCACTGGACATTC
ACAGTGTGACGTCAGAGGAGGTTTACCAGGCTATCACGTCCGTTATTTCG
GATCCTGGGTACAAGGAGAAAGCGGACCAAGTCTCCACGCATCTTCGTGA
CCAACCACAGTCGCCCATGGAGCGGGCAGTATGGTGGATAGAACACGTCA
TCAAACATGGTGGCCTCCCCCATCTCAGGTCGAGGGCGATCGAACTTTCG
TTCTACCAGTACTACTTGTAAATGAGGTCTATGCCTACGGGAGAAGACAT
CCGTGCCACTGGTGTCCCCAACCCTCTTGCTTACGTGCCAACAATGACAT
CGAGGTTGTCAGATCAGATGACATTTTTGCAGAGAGTGAAGAACGTGTTG
GTTTACTTTGCATTTTCTACTATGGGACAGCTGGTCTTCGAAAAGAGTTA
CGATGATCTTGCGAAAAGAACCATTGGCGACAACTTCACCATATCTACTG
CCTTGGCAAGAACCGACGTGTGGCTCTATCAAACAGATCTCATGTTCGAC
TTCCCTAAACCCATGATGCCAAATATGGTCAGCATAGCAGGTCACATGGC
TGAGGACGTCAAGCCGCTCAGTGAGGAGATGGAGACATTTGTGAAGAGTT
CTGGAGATGACGGTGTCGTCCTAGTAACGTTTGGCTCCATGGTAGCGGCA
ATGCCCGCAGAGATAGCCGACATGCTGGCCGCTGCTTTTGCTCGTCTACC
GCAGAAGGTCGTGTGGCGCTACGCTGGGACGCCACCTCCAAGTCTGGGGT
CCAACACCAAGACCATGGAGTGGGTGCCTCAAAACGCCTTACTAGCTCAT
CCAAAGACAAAGGCGTTTGTATCACATTGTGGTTACAACGGAGTAGCAGA
GGCCATGTACCACGGGGTACCGTTGGTCGGTATGCCTCTGTTCGCTGACC
AATCTGACAACATCGCCCGGATGGTGGCCCGTGGGATGGCGGTGTCACTG
GACATTCACAGTGTGACGTCAGAGGAGGTTTACCAGGCTATCACGTCCGT
TATTTCGGATCCTGGGTACAAGGAGAAAGCGGACCAAGTCTCCACGCATC
TTCGTGACCAACCACAGTCGCCCATGGAGCGGGCAGTATGGTGGATAGAA
CACGTCATCAAACATGGTGGCCTCCCCCATCTCAGGTCGAGGGCGATCGA
ACTTTCGTTCTACCAGTACTACTTGTAAATGAGGTCTATGCCTACGGGAG
AAGACATCCGTGCCACTGGTGTCCCCAACCCTCTTGCTTACGTGCCAACA
ATGACATCGAGGTTGTCAGATCAGATGACATTTTTGCAGAGAGTGAAGAA
CGTGTTGGTTTACTTTGCATTTTCTACTATGGGACAGCTGGTCTTCGAAA
AGAGTTACGATGATCTTGCGAAAAGAACCATTGGCGACAACTTCACCATA
TCTACTGCCTTGGCAAGAACCGACGTGTGGCTCTATCAAACAGATCTCAT
GTTCGACTTCCCTAAACCCATGATGCCAAATATGGTCAGCATAGCAGGTC
ACATGGCTGAGGACGTCAAGCCGCTCAGTGAGGAGATGGAGACATTTGTG
AAGAGTTCTGGAGATGACGGTGTCGTCCTAGTAACGTTTGGCTCCATGGT
AGCGGCAATGCCCGCAGAGATAGCCGACATGCTGGCCGCTGCTTTTGCTC
GTCTACCGCAGAAGGTCGTGTGGCGCTACGCTGGGACGCCACCTCCAAGT
CTGGGGTCCAACACCAAGACCATGGAGTGGGTGCCTCAAAACGCCTTACT
AGCTCATCCAAAGACAAAGGCGTTTGTATCACATTGTGGTTACAACGGAG
TAGCAGAGGCCATGTACCACGGGGTACCGTTGGTCGGTATGCCTCTGTTC
GCTGACCAATCTGACAACATCGCCCGGATGGTGGCCCGTGGGATGGCGGT
GTCACTGGACATTCACAGTGTGACGTCAGAGGAGGTTTACCAGGCTATCA
CGTCCGTTATTTCGGATCCTGGGTACAAGGAGAAAGCGGACCAAGTCTCC
ACGCATCTTCGTGACCAACCACAGTCGCCCATGGAGCGGGCAGTATGGTG
GATAGAACACGTCATCAAACATGGTGGCCTCCCCCATCTCAGGTCGAGGG
CGATCGAACTTTCGTTCTACCAGTACTACTTGTAAATGAGGTCTATGCCT
ACGGGAGAAGACATCCGTGCCACTGGTGTCCCCAACCCTCTTGCTTACGT
GCCAACAATGACATCGAGGTTGTCAGATCAGATGACATTTTTGCAGAGAG
TGAAGAACGTGTTGGTTTACTTTGCATTTTCTACTATGGGACAGCTGGTC
TTCGAAAAGAGTTACGATGATCTTGCGAAAAGAACCATTGGCGACAACTT
CACCATATCTACTGCCTTGGCAAGAACCGACGTGTGGCTCTATCAAACAG
ATCTCATGTTCGACTTCCCTAAACCCATGATGCCAAATATGGTCAGCATA
GCAGGTCACATGGCTGAGGACGTCAAGCCGCTCAGTGAGGAGATGGAGAC
ATTTGTGAAGAGTTCTGGAGATGACGGTGTCGTCCTAGTAACGTTTGGCT
CCATGGTAGCGGCAATGCCCGCAGAGATAGCCGACATGCTGGCCGCTGCT
TTTGCTCGTCTACCGCAGAAGGTCGTGTGGCGCTACGCTGGGACGCCACC
TCCAAGTCTGGGGTCCAACACCAAGACCATGGAGTGGGTGCCTCAAAACG
CCTTACTAGCTCATCCAAAGACAAAGGCGTTTGTATCACATTGTGGTTAC
AACGGAGTAGCAGAGGCCATGTACCACGGGGTACCGTTGGTCGGTATGCC
TCTGTTCGCTGACCAATCTGACAACATCGCCCGGATGGTGGCCCGTGGGA
TGGCGGTGTCACTGGACATTCACAGTGTGACGTCAGAGGAGGTTTACCAG
GCTATCACGTCCGTTATTTCGGATCCTGGGTACAAGGAGAAAGCGGACCA
AGTCTCCACGCATCTTCGTGACCAACCACAGTCGCCCATGGAGCGGGCAG
TATGGTGGATAGAACACGTCATCAAACATGGTGGCCTCCCCCATCTCAGG
TCGAGGGCGATCGAACTTTCGTTCTACCAGTACTACTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:795269..797737 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95504_evm1 |
| Biotype | protein_coding |
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