transcript:BL95423_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95423_evm0
Unique Nametranscript:BL95423_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95423_evm0

>transcript:BL95423_evm0-protein ID=transcript:BL95423_evm0-protein|Name=transcript:BL95423_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=137bp
MAEAVFNKFDVNKDGNMSSSELKAALKELEVTPSNALLQAILVQYDKPPK
DGVLGLNEFKNLVADMQAIQGAKREEVLDTFTNYDKDKSGFIEKDEFKEV
LKSLGMGGDDNLVQAMIATADTDGDGKISITEFANFI
Run BLAST on NCBI

mRNA from alignment at Sc0000039:1191017..1192167-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95423_evm0 ID=transcript:BL95423_evm0|Name=transcript:BL95423_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1151bp|location=Sequence derived from alignment at Sc0000039:1191017..1192167- (Branchiostoma lanceolatum)
ATGGCGGAAGCGGTTTTCAACAAGTTTGACGTCAACAAAGACGGCAACAT GAGCTCCTCAGAGCTGAAGGCTGCGTTGAAGGAGTTGGAAGTGACACCCA GCAATGCTCTTCTTCAGGTGAGTCATTGTTGAACTCTTTAGGGCCCTGTC ACACTTGTGCGTATATACAAGTGTGCGTGAGTTGCGCTGTAACATTTTTT GTTTGTTTCAGTAAGGTTTGCGGGGAAAAAGTTGCTTTCTACTTTGACCC ACTGTTGTGCAGCCTCGTGATCGAACCTAAGAAATCACTTATTCGGCTGC AAACTTAAGCTAAACCAGAGCTGCAAACTTTAGCTAAACGAGAAACATGT TAATACGCAACTCTTGTGGACTTGTATATACGCACAAGTGTGACAGGGGC TTTAGTATGACGTCGTGCCTCTGTCGACTTGTGGTTGCGGTTGCTGGTAA TATCAATAGACCTGCTTGTAACTATTAAACGTTAAAAAAAACTGCGGTTC AATCCCGGGAAGGGTATATAGGTTGGGGTTGCACCTGTGTTTCGGAAGGG ACGTAAAATGGGGGTCCCGTGTTCGAGGAGGTGCCACGAGCATGTTTAAG GGGAAGTGCTAGCAACAGCGAGGAATTAAAGTTTTGCCCTATGTGCCACT AGGCGCTACAAGGGTCTTAACGAAACTGTGGTGCCTGCATGCAGATAACG TTACAAAATAGAACATTCAATTCACCACCGGTTCATTACGCCCCCAGGCG ATCCTGGTGCAGTATGACAAACCACCCAAAGATGGCGTTCTGGGGTTGAA TGAGTTCAAGAACCTGGTAGCTGACATGCAAGCCATCCAAGGTGCTAAGC GTGAGGAAGTCCTCGATACCTTCACCAACTATGACAAGGTATGACAACAG CAAAACTGTAGTGCCTATTCAAAAGTTTGTTCTCAACTTTCTCCTTTTGT TGTGTCAATAAAGATTAATATTAAGTGTAAACTTGACCCTGACAGGATAA GAGTGGCTTCATCGAGAAGGATGAGTTTAAGGAAGTGTTAAAGTCGCTCG GCATGGGAGGTGACGACAACCTTGTTCAGGCTATGATCGCCACTGCTGAC ACGGATGGCGACGGCAAAATCAGCATCACCGAGTTCGCTAACTTCATCTG A

Coding sequence (CDS) from alignment at Sc0000039:1191017..1192167-

>transcript:BL95423_evm0 ID=transcript:BL95423_evm0|Name=transcript:BL95423_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1242bp|location=Sequence derived from alignment at Sc0000039:1191017..1192167- (Branchiostoma lanceolatum)
ATGGCGGAAGCGGTTTTCAACAAGTTTGACGTCAACAAAGACGGCAACAT
GAGCTCCTCAGAGCTGAAGGCTGCGTTGAAGGAGTTGGAAGTGACACCCA
GCAATGCTCTTCTTCAGGCGATCCTGGTGCAGTATGACAAACCACCCAAA
GATGGCGTTCTGGGGTTGAATGAGTTCAAGAACCTGGTAGCTGACATGCA
AGCCATCCAAGGTGCTAAGCGTGAGGAAGTCCTCGATACCTTCACCAACT
ATGACAAGGATAAGAGTGGCTTCATCGAGAAGGATGAGTTTAAGGAAGTG
TTAAAGTCGCTCGGCATGGGAGGTGACGACAACCTTGTTCAGGCTATGAT
CGCCACTGCTGACACGGATGGCGACGGCAAAATCAGCATCACCGAGTTCG
CTAACTTCATCTGAATGGCGGAAGCGGTTTTCAACAAGTTTGACGTCAAC
AAAGACGGCAACATGAGCTCCTCAGAGCTGAAGGCTGCGTTGAAGGAGTT
GGAAGTGACACCCAGCAATGCTCTTCTTCAGGCGATCCTGGTGCAGTATG
ACAAACCACCCAAAGATGGCGTTCTGGGGTTGAATGAGTTCAAGAACCTG
GTAGCTGACATGCAAGCCATCCAAGGTGCTAAGCGTGAGGAAGTCCTCGA
TACCTTCACCAACTATGACAAGGATAAGAGTGGCTTCATCGAGAAGGATG
AGTTTAAGGAAGTGTTAAAGTCGCTCGGCATGGGAGGTGACGACAACCTT
GTTCAGGCTATGATCGCCACTGCTGACACGGATGGCGACGGCAAAATCAG
CATCACCGAGTTCGCTAACTTCATCTGAATGGCGGAAGCGGTTTTCAACA
AGTTTGACGTCAACAAAGACGGCAACATGAGCTCCTCAGAGCTGAAGGCT
GCGTTGAAGGAGTTGGAAGTGACACCCAGCAATGCTCTTCTTCAGGCGAT
CCTGGTGCAGTATGACAAACCACCCAAAGATGGCGTTCTGGGGTTGAATG
AGTTCAAGAACCTGGTAGCTGACATGCAAGCCATCCAAGGTGCTAAGCGT
GAGGAAGTCCTCGATACCTTCACCAACTATGACAAGGATAAGAGTGGCTT
CATCGAGAAGGATGAGTTTAAGGAAGTGTTAAAGTCGCTCGGCATGGGAG
GTGACGACAACCTTGTTCAGGCTATGATCGCCACTGCTGACACGGATGGC
GACGGCAAAATCAGCATCACCGAGTTCGCTAACTTCATCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95423gene:BL95423Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95423_evm0-E1BL95423_evm0-E1-1564476830-200729Branchiostoma lanceolatumexon
BL95423_evm0-E2BL95423_evm0-E2-1564476830-200727Branchiostoma lanceolatumexon
BL95423_evm0-E3BL95423_evm0-E3-1564476830-200725Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95423_evm0transcript:BL95423_evm0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000039genomeSc0000039:1191017..1192167 -
Properties
Property NameValue
Transcript idBL95423_evm0
Biotypeprotein_coding