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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95416_evm1 >transcript:BL95416_evm1-protein ID=transcript:BL95416_evm1-protein|Name=transcript:BL95416_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=146bp
MDTFSDATDSPPTSFPITPGRPEYPARPARIRELVSKHELTSMRSPEAFG
VIMEFMRRHNYRDADFIDIRKDFQSRMSGRKKILDQKRAKLQRESDVTAK
IALGLPHVGTGETQYDQRLFNQSKGLDEDKDLYGDDGTKSSTPTDE Run BLAST on NCBI mRNA from alignment at Sc0000038:823745..826961- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95416_evm1 ID=transcript:BL95416_evm1|Name=transcript:BL95416_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3217bp|location=Sequence derived from alignment at Sc0000038:823745..826961- (Branchiostoma lanceolatum)
ATGGACACGTTTAGCGATGCGACCGACAGCCCGCCGACGAGCTTCCCAAT
CACGCCCGGTCGGCCTGAGTACCCGGCCCGCCCGGTCAGTCCCATAACAA
GTGTGCCCAGCTGTTCCTCTACTGGTTTTTCTGTGCCGTTCTACCTCGAT
GTCCAGTCAGACGCATATAGCCAAGACAGCTATGCACTGATGACCCCGAG
ACGTCCACCGCTGGGCCAGATTCAGGCGCCGGGCAACAAGAGAGCTAGAC
CGCCACCCCGGACAGTTATGTTCAACCTGGAGCGTCTTATATACAATGTA
AGACAATCTTTCTTAATCTTTCATACCTTTAATAGGCATGCATCTTTCAC
GCTAGGTTTGCTTTCAATGACCTAGACAAATTTATTATTTTCTAAGAATT
ATCATTACTTCTTTTCTTCTTTCTTAAACAGGCCAGAATTAGAGAGCTTG
TGTCGAAACACGAGCTAACAAGTATGAGGTCGCCGGAGGCGTTTGGCGTT
ATCATGGAGGTAGGTTTTGTGTACTTTTCTTTTTTGTGTGATTCTAATAT
CTTCAAATAATATAACTAGCTCATAGCATGCTGCCGCACCGCGTGCATAA
TTTATGCGAAGCTGGTGTCTTATGATCTTATGATGCTAGCCCAAGGACTC
CTATACTAGTATATGCAATGCCCAGTCCAAGGAGACCTCCTTGGCTAGCT
GAAGAGCGGCTACCCGATATTACCATATGTAAAGCTTGAAATTCAGTTCT
GACAAAAGTTCTGACAGAACTATTGTCTTTCCATACCCTTCGCAGCTTCC
GTGGTTTATGAACTAAATTAGTTCAAACAGATCTTCCGATGCCTGAGTAT
ATATAGTGCTTCTAGTAGCTGTAGAATGTTTTAGTCCGCTTCCAACGGTC
GCTGTTGACGGGTAAACCACAGTTGAAAGGGACTAAAGTTTACTCGCTCC
CAGCAGAGGTTGTTGGACAGGACCCAACAATGCACAACAACCTGCGCTGT
TGGGGCCTGCGGACGGAAATTAAAATGGGCCTACGTTTAACCTTTGGAGA
GTAACAGGACTAGGTCCGGCATTAGGCAAGCTACGACTATAGTCGGCATA
ATTTTATGAATTTTAAAAACTACTTGGAGATAAGGACTGACTGCATACTG
CTTTTTTTTTACAACTTTTTTTAAGTATAAACTTTGACGTTAGCCCAACA
TATTCATATTGTTATTTCCTTTCTTTGCAGTTCATGAGAAGACACAACTA
CCGCGATGCTGATTTCATAGACATCCGAAAGGACTTCCAATCGCGTATGA
GTGGCAGGAAAAAAATATTAGACCAGAAAAGGTTAATGTCCTTGTATGTA
CCCGTCCCATTGTTCTGCGTTTGCCTTTGTTATATGCTGTCCTTGTTTAT
ATGCTGCGCCATTGTTAGCGACTTTGGCCATTTTTATTTTTGGCTCATGT
GCCCTGGTACAACTGTATAGGAGTGCCCTGGACATATGTCCGTAGGGCTT
GTTAAGCTTTTGGTATACATATTTGCTCCAAAATGATAAATTTTGCGATT
CTATTCACATTTAAGCCCAAAATGTACATTTTCGGCTCCTGTGCCCTGGT
ATTTAAACCAAATGACGTAATACATGTATGATGTATTTGGTATGAAAATG
CCCTTGATATATGTCCACATGGGCTTTATTCACCACTGCAAAATCAAACT
TAGTGTGAGGTGGGAAATGGTCTCATGTTTGGGACCGCATTCTTCACTGC
AGAAGCGACACCTATGCTGCAGTGTAAAGAAGAACCAGTCAGTATTGCCC
TGAGGAAGGTGACAGATGCATGTGGTCACGAAAATGCCGGCTGTCACTAT
TGTTGTGAATTGTTCGAATTCGGTCTTTAAAAACCTTGGATTTGATTTTG
TTTTAGGGCCAAGCTCCAGCGTGAGAGTGACGTCACAGCAAAGATTGCCC
TAGGTCTGCCGCATGTCGGAACGGGAGAGACTCAGTACGACCAGCGGCTT
TTCAATCAGAGCAAGGTCAGTGGAATACATGGCTGGGTCTTTGTTTTTTT
AGTATAGGGCGTCCCAAAGACACACAGACGCCCTCCTAGCTAGAGGTTTG
ACTGGGAACTTTCTATCTGTCTGTGGAAAATCTGTTGTATACTGGTAACA
CTGGGTGATAGTGTTTAAGTGTACATAGCCATTCATAAAATTTAATGCAC
AATTCAAAACTGCTAACTCGTAACCGATTTGTTGGTCCATGACCAACAAA
GTCACTCTATATCTGTGAGAATGTTGCACTAATGTTTGTATCTTACCTTC
TCTTCCCCCACTAAGATGTTGTTTTAATTATTATCTGGTTTTCAATGTTT
TAAATGCACAAATGTAGTACTGTAAAGATATAAGTTGCTACAGAAACAGC
AAACAAACTTGCTGACCAATGTGACACTTGGTACTACAAGGTTGGCTACA
AAGCAAGGTTTAAGTATGTTATTTTTGTTTACATCTTTCCAGGGCTTAGA
TGAAGACAAGGACCTGTATGGAGACGACGGGACAAAATCATCAACACCAA
CAGGTTAGTGTGCACCAGTTGTTTGGTCTTGGTTACTTTTTCTTGATTTG
TTGTGCTTTTCAGAGTCAACAAGCTTGACGTGTATATTTTACATATATTT
CTGGCTTAACAGTAACTTATATTTTGTCTTTTGTAATAGGTTCGTGCCTG
ACATAGAGTTCAGCGGAACTGACCACAGCCGGCGGCGTGAAGGGCCCGTA
CAGTTCGAACGCGTGGAAATAGAGGATCTAAGGCTAAGAAAATAGATAGA
AGGCTAAGAAAGCGCCCAGATGAGAAAGCGGCTCAGCCGAGAGACTATGA
CNGAGACTTTGACTAAGACATGGTTTTGTGTCCCTTATAGCTGATTGCAC
TACTCTGCTAAATATGGTCATTTTTATGTCAGTGCAATTCCACCTTACCG
CGTGGGTGTTTGTTGCCTTTTGTTCTGAAATTTTCGAAACCTTTAAACAA
TCTTAGATAAATAACTGTTAAAAACAATTTCTACCATCTATTGGATGTTC
TATGCTATCAATACTAACCATTAGGCTTGTCCCTAAGGCATTGCCAAAAA
TGGATGACTTGAGGTGGCCTTAGAGGTTAAAATTAGACAGCAGATTTTTT
TATTTAGAGTAAACAATCAACAAATACTGTGATGTACTTAGTTGTGTTAT
CTTTCTTAGATGAATAG Coding sequence (CDS) from alignment at Sc0000038:823745..826961- >transcript:BL95416_evm1 ID=transcript:BL95416_evm1|Name=transcript:BL95416_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2646bp|location=Sequence derived from alignment at Sc0000038:823745..826961- (Branchiostoma lanceolatum)
ATGGACACGTTTAGCGATGCGACCGACAGCCCGCCGACGAGCTTCCCAAT
CACGCCCGGTCGGCCTGAGTACCCGGCCCGCCCGGCCAGAATTAGAGAGC
TTGTGTCGAAACACGAGCTAACAAGTATGAGGTCGCCGGAGGCGTTTGGC
GTTATCATGGAGTTCATGAGAAGACACAACTACCGCGATGCTGATTTCAT
AGACATCCGAAAGGACTTCCAATCGCGTATGAGTGGCAGGAAAAAAATAT
TAGACCAGAAAAGGGCCAAGCTCCAGCGTGAGAGTGACGTCACAGCAAAG
ATTGCCCTAGGTCTGCCGCATGTCGGAACGGGAGAGACTCAGTACGACCA
GCGGCTTTTCAATCAGAGCAAGGGCTTAGATGAAGACAAGGACCTGTATG
GAGACGACGGGACAAAATCATCAACACCAACAGATGAATAGATGGACACG
TTTAGCGATGCGACCGACAGCCCGCCGACGAGCTTCCCAATCACGCCCGG
TCGGCCTGAGTACCCGGCCCGCCCGGCCAGAATTAGAGAGCTTGTGTCGA
AACACGAGCTAACAAGTATGAGGTCGCCGGAGGCGTTTGGCGTTATCATG
GAGTTCATGAGAAGACACAACTACCGCGATGCTGATTTCATAGACATCCG
AAAGGACTTCCAATCGCGTATGAGTGGCAGGAAAAAAATATTAGACCAGA
AAAGGGCCAAGCTCCAGCGTGAGAGTGACGTCACAGCAAAGATTGCCCTA
GGTCTGCCGCATGTCGGAACGGGAGAGACTCAGTACGACCAGCGGCTTTT
CAATCAGAGCAAGGGCTTAGATGAAGACAAGGACCTGTATGGAGACGACG
GGACAAAATCATCAACACCAACAGATGAATAGATGGACACGTTTAGCGAT
GCGACCGACAGCCCGCCGACGAGCTTCCCAATCACGCCCGGTCGGCCTGA
GTACCCGGCCCGCCCGGCCAGAATTAGAGAGCTTGTGTCGAAACACGAGC
TAACAAGTATGAGGTCGCCGGAGGCGTTTGGCGTTATCATGGAGTTCATG
AGAAGACACAACTACCGCGATGCTGATTTCATAGACATCCGAAAGGACTT
CCAATCGCGTATGAGTGGCAGGAAAAAAATATTAGACCAGAAAAGGGCCA
AGCTCCAGCGTGAGAGTGACGTCACAGCAAAGATTGCCCTAGGTCTGCCG
CATGTCGGAACGGGAGAGACTCAGTACGACCAGCGGCTTTTCAATCAGAG
CAAGGGCTTAGATGAAGACAAGGACCTGTATGGAGACGACGGGACAAAAT
CATCAACACCAACAGATGAATAGATGGACACGTTTAGCGATGCGACCGAC
AGCCCGCCGACGAGCTTCCCAATCACGCCCGGTCGGCCTGAGTACCCGGC
CCGCCCGGCCAGAATTAGAGAGCTTGTGTCGAAACACGAGCTAACAAGTA
TGAGGTCGCCGGAGGCGTTTGGCGTTATCATGGAGTTCATGAGAAGACAC
AACTACCGCGATGCTGATTTCATAGACATCCGAAAGGACTTCCAATCGCG
TATGAGTGGCAGGAAAAAAATATTAGACCAGAAAAGGGCCAAGCTCCAGC
GTGAGAGTGACGTCACAGCAAAGATTGCCCTAGGTCTGCCGCATGTCGGA
ACGGGAGAGACTCAGTACGACCAGCGGCTTTTCAATCAGAGCAAGGGCTT
AGATGAAGACAAGGACCTGTATGGAGACGACGGGACAAAATCATCAACAC
CAACAGATGAATAGATGGACACGTTTAGCGATGCGACCGACAGCCCGCCG
ACGAGCTTCCCAATCACGCCCGGTCGGCCTGAGTACCCGGCCCGCCCGGC
CAGAATTAGAGAGCTTGTGTCGAAACACGAGCTAACAAGTATGAGGTCGC
CGGAGGCGTTTGGCGTTATCATGGAGTTCATGAGAAGACACAACTACCGC
GATGCTGATTTCATAGACATCCGAAAGGACTTCCAATCGCGTATGAGTGG
CAGGAAAAAAATATTAGACCAGAAAAGGGCCAAGCTCCAGCGTGAGAGTG
ACGTCACAGCAAAGATTGCCCTAGGTCTGCCGCATGTCGGAACGGGAGAG
ACTCAGTACGACCAGCGGCTTTTCAATCAGAGCAAGGGCTTAGATGAAGA
CAAGGACCTGTATGGAGACGACGGGACAAAATCATCAACACCAACAGATG
AATAGATGGACACGTTTAGCGATGCGACCGACAGCCCGCCGACGAGCTTC
CCAATCACGCCCGGTCGGCCTGAGTACCCGGCCCGCCCGGCCAGAATTAG
AGAGCTTGTGTCGAAACACGAGCTAACAAGTATGAGGTCGCCGGAGGCGT
TTGGCGTTATCATGGAGTTCATGAGAAGACACAACTACCGCGATGCTGAT
TTCATAGACATCCGAAAGGACTTCCAATCGCGTATGAGTGGCAGGAAAAA
AATATTAGACCAGAAAAGGGCCAAGCTCCAGCGTGAGAGTGACGTCACAG
CAAAGATTGCCCTAGGTCTGCCGCATGTCGGAACGGGAGAGACTCAGTAC
GACCAGCGGCTTTTCAATCAGAGCAAGGGCTTAGATGAAGACAAGGACCT
GTATGGAGACGACGGGACAAAATCATCAACACCAACAGATGAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000038 | genome | Sc0000038:823745..826961 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95416_evm1 |
| Biotype | protein_coding |
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