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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95393_evm1 >transcript:BL95393_evm1-protein ID=transcript:BL95393_evm1-protein|Name=transcript:BL95393_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=493bp
MVSPRTSFEETPQTVMCPDHPTKPVEMYCVQDQTPVCLLCEKVGRHKQHN
MAALEEVFSQRRAELQAGVDRLGARVAEEEEKVRGLEKKREQIMTSAEEL
KTRIDKECESLMAVIRSRSTEMHQELQRTKDKDDENLQGVIKCARDGVQK
ARTALSYAQEAMKETDHASLLLTDQAVKAKIERTIKTLDTNCEEAICEID
EMDIDLEPWKEDLETINISAPPTAPMILEDQCSTTMEEARIVWDPAEEAD
ENDIRYTVGNIQTVSTVKGCSYTATGLAPGTIYKFEVSSKSKAGRSCPST
IELVTTPFKFQLDLNTASEYLSLSQDNTHVEKVKSLLSLPDSSLRFTPDS
DTGQTVLGDKPISRGRAYWEVSVKEEYAHSVGVAYADMPRNKDIRYAKHS
WAFDYFAKTTKYTVFSKGRFQGEKIINPPLLKVGILVDYDEGQLSFFNAD
TTTLIYTHTEEDGFDKPLYPAFSLWGRSSMEIHSGLVCPSPRP Run BLAST on NCBI mRNA from alignment at Sc0000034:2151852..2153893- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95393_evm1 ID=transcript:BL95393_evm1|Name=transcript:BL95393_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2042bp|location=Sequence derived from alignment at Sc0000034:2151852..2153893- (Branchiostoma lanceolatum)
ATGGTCAGTCCAAGAACATCGTTTGAAGAGGTAAGCGAAGTAATGTTAAA
AAATGCCAATCATCCAATTATGCAAATAAGGGTCTAATTTGCATAATTGA
TGATTTAGCGCCTTAGTTCATCTAAGTCGTGAATGATAGAAATGTCATAC
TTGTGACGAATGTAAGCTAATGAAAGGTGTACAATACTAGGCATAGGTTA
TCTTAAAGTATGCATATAATATCATGCAAATAAGGAAGTCATTTGCATAA
TCGAAATTGGAGGGATGTGGTATCCGAGATCTCTGAACTTGAGGTTTGAT
TCACTGTTTATGAATTCTAAGATATACGAATCTCAGACTGTACACTTGAT
CTACTGTTACATTTGTCATCGTAGACCCCACAGACCGTGATGTGCCCCGA
CCACCCCACCAAACCAGTGGAGATGTACTGTGTGCAGGACCAGACTCCCG
TCTGTCTGCTGTGTGAGAAGGTGGGCAGACACAAGCAGCACAACATGGCG
GCCCTGGAGGAGGTATTCTCCCAGAGACGGGCCGAGCTGCAGGCCGGGGT
GGACCGCCTGGGGGCCAGGGTAGCGGAGGAAGAGGAGAAGGTCCGAGGAC
TGGAAAAGAAACGAGAACAGATAATGACGAGGTACATCAATATTACACAA
TTCTATACCATTTGCCACTCGTTCGTAAAACACAGTTGCTATCAGACGTG
ACATTCCACAACAATAAGTTTTTATCAGCAAAAGAAGCTATTTTGCAACT
GGGAAAGGATTGTAATGAAAAGAGAGGACACTGAAAATCACAATTACCAT
CACATCTCTACCAAATGTTGACTTATTCTGATCTCTTTTACTTAAAGCGC
TGAAGAGTTGAAGACTCGAATTGACAAAGAATGTGAAAGTCTCATGGCGG
TTATCCGAAGTCGCAGCACCGAAATGCACCAAGAGCTGCAGCGTACAAAA
GACAAGGATGATGAAAATCTTCAGGGCGTGATCAAATGTGCAAGGGATGG
GGTACAGAAGGCGCGCACAGCACTGTCTTACGCACAGGAGGCCATGAAGG
AGACTGACCACGCCAGCTTGCTGCTGACTGACCAGGCGGTGAAGGCTAAA
ATAGAGAGAACCATCAAGACTTTAGACACCAATTGCGAGGAAGCCATTTG
TGAGATTGACGAGATGGACATTGACTTGGAACCATGGAAAGAAGATTTGG
AAACGATCAACATATCTGCACCCCCGACCGCTCCAATGATCCTGGAGGAC
CAATGCAGCACCACGATGGAGGAAGCCCGTATTGTGTGGGATCCTGCCGA
AGAGGCCGATGAGAATGACATTCGTTACACAGTTGGCAACATTCAAACAG
TTTCCACCGTCAAAGGCTGCTCATATACAGCCACAGGCCTGGCTCCAGGG
ACAATTTACAAGTTTGAAGTCAGTTCTAAATCCAAAGCTGGCAGGTCTTG
TCCGAGCACCATCGAACTGGTCACAACGCCGTTCAAATTCCAACTGGATC
TCAACACTGCTTCCGAGTACCTTTCGCTTTCACAAGACAACACTCACGTT
GAAAAGGTCAAGTCCCTGCTGTCTCTTCCTGATTCGTCGCTGCGTTTCAC
TCCAGATAGCGACACAGGTCAGACGGTTCTTGGAGACAAGCCTATCAGTC
GGGGCCGTGCCTACTGGGAAGTCAGTGTAAAAGAAGAGTACGCGCACAGC
GTAGGCGTGGCCTATGCAGACATGCCCCGTAACAAAGACATTCGATACGC
AAAACATTCCTGGGCTTTTGATTACTTTGCTAAGACCACCAAATACACTG
TCTTTTCTAAAGGCAGATTCCAAGGTGAAAAAATTATAAATCCGCCGCTG
CTCAAGGTTGGCATTCTCGTTGACTATGACGAAGGCCAACTTTCCTTCTT
CAACGCAGATACAACAACCCTCATCTACACACACACCGAAGAAGACGGAT
TCGATAAGCCACTCTACCCAGCGTTCTCGCTGTGGGGGCGTAGTTCCATG
GAGATTCACAGTGGCCTCGTTTGTCCATCTCCAAGGCCGTGA Coding sequence (CDS) from alignment at Sc0000034:2151852..2153893- >transcript:BL95393_evm1 ID=transcript:BL95393_evm1|Name=transcript:BL95393_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4446bp|location=Sequence derived from alignment at Sc0000034:2151852..2153893- (Branchiostoma lanceolatum)
ATGGTCAGTCCAAGAACATCGTTTGAAGAGACCCCACAGACCGTGATGTG
CCCCGACCACCCCACCAAACCAGTGGAGATGTACTGTGTGCAGGACCAGA
CTCCCGTCTGTCTGCTGTGTGAGAAGGTGGGCAGACACAAGCAGCACAAC
ATGGCGGCCCTGGAGGAGGTATTCTCCCAGAGACGGGCCGAGCTGCAGGC
CGGGGTGGACCGCCTGGGGGCCAGGGTAGCGGAGGAAGAGGAGAAGGTCC
GAGGACTGGAAAAGAAACGAGAACAGATAATGACGAGCGCTGAAGAGTTG
AAGACTCGAATTGACAAAGAATGTGAAAGTCTCATGGCGGTTATCCGAAG
TCGCAGCACCGAAATGCACCAAGAGCTGCAGCGTACAAAAGACAAGGATG
ATGAAAATCTTCAGGGCGTGATCAAATGTGCAAGGGATGGGGTACAGAAG
GCGCGCACAGCACTGTCTTACGCACAGGAGGCCATGAAGGAGACTGACCA
CGCCAGCTTGCTGCTGACTGACCAGGCGGTGAAGGCTAAAATAGAGAGAA
CCATCAAGACTTTAGACACCAATTGCGAGGAAGCCATTTGTGAGATTGAC
GAGATGGACATTGACTTGGAACCATGGAAAGAAGATTTGGAAACGATCAA
CATATCTGCACCCCCGACCGCTCCAATGATCCTGGAGGACCAATGCAGCA
CCACGATGGAGGAAGCCCGTATTGTGTGGGATCCTGCCGAAGAGGCCGAT
GAGAATGACATTCGTTACACAGTTGGCAACATTCAAACAGTTTCCACCGT
CAAAGGCTGCTCATATACAGCCACAGGCCTGGCTCCAGGGACAATTTACA
AGTTTGAAGTCAGTTCTAAATCCAAAGCTGGCAGGTCTTGTCCGAGCACC
ATCGAACTGGTCACAACGCCGTTCAAATTCCAACTGGATCTCAACACTGC
TTCCGAGTACCTTTCGCTTTCACAAGACAACACTCACGTTGAAAAGGTCA
AGTCCCTGCTGTCTCTTCCTGATTCGTCGCTGCGTTTCACTCCAGATAGC
GACACAGGTCAGACGGTTCTTGGAGACAAGCCTATCAGTCGGGGCCGTGC
CTACTGGGAAGTCAGTGTAAAAGAAGAGTACGCGCACAGCGTAGGCGTGG
CCTATGCAGACATGCCCCGTAACAAAGACATTCGATACGCAAAACATTCC
TGGGCTTTTGATTACTTTGCTAAGACCACCAAATACACTGTCTTTTCTAA
AGGCAGATTCCAAGGTGAAAAAATTATAAATCCGCCGCTGCTCAAGGTTG
GCATTCTCGTTGACTATGACGAAGGCCAACTTTCCTTCTTCAACGCAGAT
ACAACAACCCTCATCTACACACACACCGAAGAAGACGGATTCGATAAGCC
ACTCTACCCAGCGTTCTCGCTGTGGGGGCGTAGTTCCATGGAGATTCACA
GTGGCCTCGTTTGTCCATCTCCAAGGCCGTGAATGGTCAGTCCAAGAACA
TCGTTTGAAGAGACCCCACAGACCGTGATGTGCCCCGACCACCCCACCAA
ACCAGTGGAGATGTACTGTGTGCAGGACCAGACTCCCGTCTGTCTGCTGT
GTGAGAAGGTGGGCAGACACAAGCAGCACAACATGGCGGCCCTGGAGGAG
GTATTCTCCCAGAGACGGGCCGAGCTGCAGGCCGGGGTGGACCGCCTGGG
GGCCAGGGTAGCGGAGGAAGAGGAGAAGGTCCGAGGACTGGAAAAGAAAC
GAGAACAGATAATGACGAGCGCTGAAGAGTTGAAGACTCGAATTGACAAA
GAATGTGAAAGTCTCATGGCGGTTATCCGAAGTCGCAGCACCGAAATGCA
CCAAGAGCTGCAGCGTACAAAAGACAAGGATGATGAAAATCTTCAGGGCG
TGATCAAATGTGCAAGGGATGGGGTACAGAAGGCGCGCACAGCACTGTCT
TACGCACAGGAGGCCATGAAGGAGACTGACCACGCCAGCTTGCTGCTGAC
TGACCAGGCGGTGAAGGCTAAAATAGAGAGAACCATCAAGACTTTAGACA
CCAATTGCGAGGAAGCCATTTGTGAGATTGACGAGATGGACATTGACTTG
GAACCATGGAAAGAAGATTTGGAAACGATCAACATATCTGCACCCCCGAC
CGCTCCAATGATCCTGGAGGACCAATGCAGCACCACGATGGAGGAAGCCC
GTATTGTGTGGGATCCTGCCGAAGAGGCCGATGAGAATGACATTCGTTAC
ACAGTTGGCAACATTCAAACAGTTTCCACCGTCAAAGGCTGCTCATATAC
AGCCACAGGCCTGGCTCCAGGGACAATTTACAAGTTTGAAGTCAGTTCTA
AATCCAAAGCTGGCAGGTCTTGTCCGAGCACCATCGAACTGGTCACAACG
CCGTTCAAATTCCAACTGGATCTCAACACTGCTTCCGAGTACCTTTCGCT
TTCACAAGACAACACTCACGTTGAAAAGGTCAAGTCCCTGCTGTCTCTTC
CTGATTCGTCGCTGCGTTTCACTCCAGATAGCGACACAGGTCAGACGGTT
CTTGGAGACAAGCCTATCAGTCGGGGCCGTGCCTACTGGGAAGTCAGTGT
AAAAGAAGAGTACGCGCACAGCGTAGGCGTGGCCTATGCAGACATGCCCC
GTAACAAAGACATTCGATACGCAAAACATTCCTGGGCTTTTGATTACTTT
GCTAAGACCACCAAATACACTGTCTTTTCTAAAGGCAGATTCCAAGGTGA
AAAAATTATAAATCCGCCGCTGCTCAAGGTTGGCATTCTCGTTGACTATG
ACGAAGGCCAACTTTCCTTCTTCAACGCAGATACAACAACCCTCATCTAC
ACACACACCGAAGAAGACGGATTCGATAAGCCACTCTACCCAGCGTTCTC
GCTGTGGGGGCGTAGTTCCATGGAGATTCACAGTGGCCTCGTTTGTCCAT
CTCCAAGGCCGTGAATGGTCAGTCCAAGAACATCGTTTGAAGAGACCCCA
CAGACCGTGATGTGCCCCGACCACCCCACCAAACCAGTGGAGATGTACTG
TGTGCAGGACCAGACTCCCGTCTGTCTGCTGTGTGAGAAGGTGGGCAGAC
ACAAGCAGCACAACATGGCGGCCCTGGAGGAGGTATTCTCCCAGAGACGG
GCCGAGCTGCAGGCCGGGGTGGACCGCCTGGGGGCCAGGGTAGCGGAGGA
AGAGGAGAAGGTCCGAGGACTGGAAAAGAAACGAGAACAGATAATGACGA
GCGCTGAAGAGTTGAAGACTCGAATTGACAAAGAATGTGAAAGTCTCATG
GCGGTTATCCGAAGTCGCAGCACCGAAATGCACCAAGAGCTGCAGCGTAC
AAAAGACAAGGATGATGAAAATCTTCAGGGCGTGATCAAATGTGCAAGGG
ATGGGGTACAGAAGGCGCGCACAGCACTGTCTTACGCACAGGAGGCCATG
AAGGAGACTGACCACGCCAGCTTGCTGCTGACTGACCAGGCGGTGAAGGC
TAAAATAGAGAGAACCATCAAGACTTTAGACACCAATTGCGAGGAAGCCA
TTTGTGAGATTGACGAGATGGACATTGACTTGGAACCATGGAAAGAAGAT
TTGGAAACGATCAACATATCTGCACCCCCGACCGCTCCAATGATCCTGGA
GGACCAATGCAGCACCACGATGGAGGAAGCCCGTATTGTGTGGGATCCTG
CCGAAGAGGCCGATGAGAATGACATTCGTTACACAGTTGGCAACATTCAA
ACAGTTTCCACCGTCAAAGGCTGCTCATATACAGCCACAGGCCTGGCTCC
AGGGACAATTTACAAGTTTGAAGTCAGTTCTAAATCCAAAGCTGGCAGGT
CTTGTCCGAGCACCATCGAACTGGTCACAACGCCGTTCAAATTCCAACTG
GATCTCAACACTGCTTCCGAGTACCTTTCGCTTTCACAAGACAACACTCA
CGTTGAAAAGGTCAAGTCCCTGCTGTCTCTTCCTGATTCGTCGCTGCGTT
TCACTCCAGATAGCGACACAGGTCAGACGGTTCTTGGAGACAAGCCTATC
AGTCGGGGCCGTGCCTACTGGGAAGTCAGTGTAAAAGAAGAGTACGCGCA
CAGCGTAGGCGTGGCCTATGCAGACATGCCCCGTAACAAAGACATTCGAT
ACGCAAAACATTCCTGGGCTTTTGATTACTTTGCTAAGACCACCAAATAC
ACTGTCTTTTCTAAAGGCAGATTCCAAGGTGAAAAAATTATAAATCCGCC
GCTGCTCAAGGTTGGCATTCTCGTTGACTATGACGAAGGCCAACTTTCCT
TCTTCAACGCAGATACAACAACCCTCATCTACACACACACCGAAGAAGAC
GGATTCGATAAGCCACTCTACCCAGCGTTCTCGCTGTGGGGGCGTAGTTC
CATGGAGATTCACAGTGGCCTCGTTTGTCCATCTCCAAGGCCGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000034 | genome | Sc0000034:2151852..2153893 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95393_evm1 |
| Biotype | protein_coding |
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