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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95382_evm0 >transcript:BL95382_evm0-protein ID=transcript:BL95382_evm0-protein|Name=transcript:BL95382_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=278bp
MASESDSILTVNSPRGKKAEAPPSSWYEKYIQPCIAEFVGLIVFAFVGTM
VTGYAGMGGPTWLVGIALAHGLTIALLIVGMGHISGGHFNPAVTLGVTLA
GGIHPLLAGGYGISQLMGSMIGAAFTKAILPNVTYIQCNGGTHSIGAGVS
VGGAILCEAILTMTLVMTVIMSAVDSASKGKALPPLAIGLAVLTGILAGG
PFSGASMNPARAFGPAVVSGVWKDHYVWWLGPMLGGLIAGGLYSALGSQA
TCVRQAEPAVTRQVTWEVLEVSDRETSL Run BLAST on NCBI mRNA from alignment at Sc0000033:1748004..1752026+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95382_evm0 ID=transcript:BL95382_evm0|Name=transcript:BL95382_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4023bp|location=Sequence derived from alignment at Sc0000033:1748004..1752026+ (Branchiostoma lanceolatum)
ATGGCGTCTGAGTCAGACAGCATTCTCACGGTCAACAGCCCGAGAGGCAA
AAAGGCAGAAGCGCCTCCTAGCTCCTGGTACGAGAAGTACATCCAGCCGT
GCATTGCGGAATTCGTCGGACTGATCGTCTTTGCGTTCGTCGGAACCATG
GTGACGGGTAGGCTTGGACACGACAGGCTTCGGATTGTAGCTTGATATCA
TGCGACTGTTCCCCCACCCCTTACAAACAAACAAACAAACAAACAAACAC
ACACACAGACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACTCACACATACACACGCAGAC
ACGCAGACACGCACACAACTATCACAAATACAAACACAGACACGCACCCA
CCCACACAAAAACACTCGGACATACAATTCATCATGAGAACAAGACACTT
ATTGTTGCAACAAAAGCATAGTAATTCCTTCAATTACATATAGTAAGGAT
TGTTGTACTAATATCACACTTGTCGGAGTGCATGTGGCATATCTATGGAC
ACAATTCGTTGAATTAAATGTTCTTTTGAAAACCTGTGGTTTACAGGATA
TGCCGGTATGGGTGGCCCCACTTGGCTTGTCGGAATCGCCCTGGCACACG
GGCTGACTATAGCCCTGCTCATCGTGGGTATGGGGCATATCAGGTGAGTG
CGTGAGGGCTAGCCTGTGTTTACACAATCTCTCGCTGACGGAGGGTAATG
ACGCCCTCTATGGGCGGTATCCGTCAGGCCGGCCGCTAGGAGCGCGATTT
AGTCAGGCTTGGCGAGGGCTGTCAGTGCCAATATGCATTTTGGAAATAGC
ATCGCACTATAGCTTGTTCATCGTTTGCCCGATTGCGGGAATGAACGACC
GTGCAAATCTTGTCCAGGGGCAGAGGATTCCAAAGCTTTATGTGTTCTGA
GGCAGTTTGCAACAAAAGCATAATCTTTACTACGTTTTTCTTGCTTTGGG
AGGCCAAAGGGCTAAGGAAACGAAGATGGGCGCGCCGCCCTATACACCGT
ATGGCGTAAGACGGCCGTTGACTTTCTTGCTTTGTGGCGACGTTTCGCGC
AGCAAACAACCAGAAATAACCGGCGAAAGAAGACTATTACCAATACTGGA
ATGATCGAAATAATGGTCAATACTTTATCAATCTTCCCAGTGGAGGTCAC
TTTAACCCTGCCGTGACCTTGGGAGTGACCTTGGCGGGAGGCATCCACCC
GTTGCTGGCAGGAGGCTACGGTATCAGTCAACTGATGGGTTCTATGATTG
GAGCTGCATTCACCAAGGTAGGAAGGACTAGCTGGTATATAGAGAGAGGT
GGGAGGGAGGGAGGGACACTTATAAAGACACGGTAGTAGGTGAGGGTGCT
GCATAATATGGTATATAAGACACAAACCAGCAATAGAAATCTAAATTGGC
AGTAATATTTATTTGTGTGTACAGCAGCATTGTAAATGTCGACGTATTCC
ATGTACATGTCTTATGTCATGCAAGTTGATTTTCAATAAACCGAATACTA
AGGTAAACATAAGTAAGTTCAGGGTGTCATAATCTCATACATGGACATTC
CAGGTCGTAACAACTCACCCCACACTGCCAGATATGTCAAGTGTCCAAAA
CATCAGATTCAAACAATTTCCGTACGGTGTAAGATTTCGCAATTAAAAGC
AAGTTCAAGCAATGTCGCCATATTGGTTTTTGATTACGTCAATTTAGGGA
CTGACCACTTTAATATTAGGGGTCTGCACAAGCCTGAAAATGGACGTCTT
TGTTTTTTTACCAAATATGAAAATCTACACCCTGTACTGTCTCATCAATA
TAAAATGTCTATAACATTCCCCTGAAAAATGGCTTCTACAAGTCTGCAAG
GCTAATATACTGATGCGTCTATTACCGGCCATTGCCCTATAGAGGGACTG
TGGTAGGGTAGGGCCCTGCCAAATTGGGTTTACAGAGGCAGGGTGGTTGG
GAAGGGCACTATTTATACAACGGCCTGTTTACCAAAGCACATTTATTGTC
ATTATATAACTACAAGCTATACTTCAACCTACTAAAACGTGTTGTTTAGA
TGTGTCTGTCGCAGCAGTACCTACAATGATAATGTTTACGACTATTTTAC
TCCTGTCTTTTTATATCCAGGCGATCCTACCCAACGTAACTTACATTCAA
TGCAACGGCGGCACTCACAGTATCGGTGCCGGTGTGTCAGTGGGCGGGGC
TATCCTGTGTGAGGCCATCCTGACTATGACTCTGGTGATGACCGTCATCA
TGTCAGCTGTAGACTCCGCCTCTAAAGGGAAGGCTCTTCCACCTCTCGCC
ATCGGGCTGGCCGTGCTCACCGGCATCCTAGCCGGGTAAGAGAACATAGC
TAATGCTACGGTCCCAATTGCGCCGGTGCCCAATGAGTGAGTGGTGTAGA
TCTGAGCGCTCTAGTTCCTTTTTGTAACTGCAGAGGTAGGACACGGGACC
CCCACGTCCCTTCCGAAGGACGGTGCAGCCCCAACCGAGATGTCCTGACC
CCGGAACTTGAACTGGGGTTTCCAAGCTACTAGTATTAGTGAATTGAGCC
AGGAGCTCAATTGCAAGGCTGCTACCAATTGAGCCACAGCCACAGCCTCT
TGGAATTAGTAAATTAGATATCTTAAAATGGTGTGTTTTTTTCGTTTGTT
ATCCAGCGGCCCGTTCTCCGGAGCGTCCATGAACCCAGCCCGCGCGTTCG
GCCCGGCCGTGGTGTCGGGTGTGTGGAAGGACCACTACGTGTGGTGGCTG
GGGCCGATGCTAGGCGGACTCATCGCAGGAGGACTTTACAGGTATGCAAG
ACTTGCGATCCTCTCATTTCCAGGCCCACTGCTTGTATATCAAGCTACTG
CTCTGGCGTACCGGCCTACGTTTCATATTCTTATCGCTCAGTCGACGAGC
TTCCGCCATACGTATTTGTTGATCGCTAGAAGGTCGCCGAATTTAAAAAT
GGGCAAAAACTCGAGCGTATTTTTCACCTAGCAACCCTATCACATTGGTC
GAGGCTCGGGGACCTGAAAACATTGGCCGATCTATAGAAATCGCGCGATG
GTTGAGAGAAGCCGAACGTGTTACTGCCAAAATGTCATGTAGAGCTCACA
GAATCGTCGACTGATCGATTTATTTGCTGTGTGACAAGGGCAGCAGCACT
GACTAGCCGCTAGCCAATCAGATACTTTTCTTCCTGGTGTTGAATGGAAC
ATTGCCGTCAATCACGTTGCCTCTTGACCACAGGCAGGCAATAAGACGTC
GAGGCTTGCTAGAGCTCCTTAAAGAATCTGTCACTTGTCTGTTCTCCATG
TTGTTCAATTTGTTTTTGAATCANACTTGTCTGTTCTCCATGTTGTTCAA
TTTGTTTTTAAATCGAAATCAACCCTTAGCCGTAGTGCCTCCAAGGTGGC
GTCTTTCATGAAATGGCTATACAACGTTAGTATATAATCCTATTCATGAT
TGGAACATCGAGGTTAAAGACGCTCTCCTGGAAACGCTATGGCTACTGTC
ATCCCTACTCTTCGAGCGAATGTTGAGAGAAAAGATCGTAACGCTTCTCT
GATGACTTCCACGTCTTCTGACATCTCCAACGGGTTTTGTTTTAAGTTAA
AAGATTAAAAAGAGCAGTCGATAGCCTCCTCAGCATGCTCTACGAGTCGG
GGTTTTGTTGTTGCTACATGTACTTCTAATATTCTGCACCAGGTGCAATA
GAACTCTCATGCCATCACAAACTGAAGCATTTTATAAGCCCCAAAAAGCC
GCATTCGTAGAGCCTGTAAAGAAGGCTAATTATAAGCAGTCGGAAGATGT
TACGATCTTTCCTCCGAACATCTTCTTGAAGACTGCATATCCCCTTCCTT
CCTTCCTTCCGCCGTAGCGCCCTCGGCTCCCAGGCCACGTGCGTAAGACA
AGCGGAGCCGGCGGTGACACGGCAGGTCACGTGGGAGGTTCTGGAGGTGT
CCGATAGGGAGACGTCATTATGA Coding sequence (CDS) from alignment at Sc0000033:1748004..1752026+ >transcript:BL95382_evm0 ID=transcript:BL95382_evm0|Name=transcript:BL95382_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5022bp|location=Sequence derived from alignment at Sc0000033:1748004..1752026+ (Branchiostoma lanceolatum)
ATGGCGTCTGAGTCAGACAGCATTCTCACGGTCAACAGCCCGAGAGGCAA
AAAGGCAGAAGCGCCTCCTAGCTCCTGGTACGAGAAGTACATCCAGCCGT
GCATTGCGGAATTCGTCGGACTGATCGTCTTTGCGTTCGTCGGAACCATG
GTGACGGGATATGCCGGTATGGGTGGCCCCACTTGGCTTGTCGGAATCGC
CCTGGCACACGGGCTGACTATAGCCCTGCTCATCGTGGGTATGGGGCATA
TCAGTGGAGGTCACTTTAACCCTGCCGTGACCTTGGGAGTGACCTTGGCG
GGAGGCATCCACCCGTTGCTGGCAGGAGGCTACGGTATCAGTCAACTGAT
GGGTTCTATGATTGGAGCTGCATTCACCAAGGCGATCCTACCCAACGTAA
CTTACATTCAATGCAACGGCGGCACTCACAGTATCGGTGCCGGTGTGTCA
GTGGGCGGGGCTATCCTGTGTGAGGCCATCCTGACTATGACTCTGGTGAT
GACCGTCATCATGTCAGCTGTAGACTCCGCCTCTAAAGGGAAGGCTCTTC
CACCTCTCGCCATCGGGCTGGCCGTGCTCACCGGCATCCTAGCCGGCGGC
CCGTTCTCCGGAGCGTCCATGAACCCAGCCCGCGCGTTCGGCCCGGCCGT
GGTGTCGGGTGTGTGGAAGGACCACTACGTGTGGTGGCTGGGGCCGATGC
TAGGCGGACTCATCGCAGGAGGACTTTACAGCGCCCTCGGCTCCCAGGCC
ACGTGCGTAAGACAAGCGGAGCCGGCGGTGACACGGCAGGTCACGTGGGA
GGTTCTGGAGGTGTCCGATAGGGAGACGTCATTATGAATGGCGTCTGAGT
CAGACAGCATTCTCACGGTCAACAGCCCGAGAGGCAAAAAGGCAGAAGCG
CCTCCTAGCTCCTGGTACGAGAAGTACATCCAGCCGTGCATTGCGGAATT
CGTCGGACTGATCGTCTTTGCGTTCGTCGGAACCATGGTGACGGGATATG
CCGGTATGGGTGGCCCCACTTGGCTTGTCGGAATCGCCCTGGCACACGGG
CTGACTATAGCCCTGCTCATCGTGGGTATGGGGCATATCAGTGGAGGTCA
CTTTAACCCTGCCGTGACCTTGGGAGTGACCTTGGCGGGAGGCATCCACC
CGTTGCTGGCAGGAGGCTACGGTATCAGTCAACTGATGGGTTCTATGATT
GGAGCTGCATTCACCAAGGCGATCCTACCCAACGTAACTTACATTCAATG
CAACGGCGGCACTCACAGTATCGGTGCCGGTGTGTCAGTGGGCGGGGCTA
TCCTGTGTGAGGCCATCCTGACTATGACTCTGGTGATGACCGTCATCATG
TCAGCTGTAGACTCCGCCTCTAAAGGGAAGGCTCTTCCACCTCTCGCCAT
CGGGCTGGCCGTGCTCACCGGCATCCTAGCCGGCGGCCCGTTCTCCGGAG
CGTCCATGAACCCAGCCCGCGCGTTCGGCCCGGCCGTGGTGTCGGGTGTG
TGGAAGGACCACTACGTGTGGTGGCTGGGGCCGATGCTAGGCGGACTCAT
CGCAGGAGGACTTTACAGCGCCCTCGGCTCCCAGGCCACGTGCGTAAGAC
AAGCGGAGCCGGCGGTGACACGGCAGGTCACGTGGGAGGTTCTGGAGGTG
TCCGATAGGGAGACGTCATTATGAATGGCGTCTGAGTCAGACAGCATTCT
CACGGTCAACAGCCCGAGAGGCAAAAAGGCAGAAGCGCCTCCTAGCTCCT
GGTACGAGAAGTACATCCAGCCGTGCATTGCGGAATTCGTCGGACTGATC
GTCTTTGCGTTCGTCGGAACCATGGTGACGGGATATGCCGGTATGGGTGG
CCCCACTTGGCTTGTCGGAATCGCCCTGGCACACGGGCTGACTATAGCCC
TGCTCATCGTGGGTATGGGGCATATCAGTGGAGGTCACTTTAACCCTGCC
GTGACCTTGGGAGTGACCTTGGCGGGAGGCATCCACCCGTTGCTGGCAGG
AGGCTACGGTATCAGTCAACTGATGGGTTCTATGATTGGAGCTGCATTCA
CCAAGGCGATCCTACCCAACGTAACTTACATTCAATGCAACGGCGGCACT
CACAGTATCGGTGCCGGTGTGTCAGTGGGCGGGGCTATCCTGTGTGAGGC
CATCCTGACTATGACTCTGGTGATGACCGTCATCATGTCAGCTGTAGACT
CCGCCTCTAAAGGGAAGGCTCTTCCACCTCTCGCCATCGGGCTGGCCGTG
CTCACCGGCATCCTAGCCGGCGGCCCGTTCTCCGGAGCGTCCATGAACCC
AGCCCGCGCGTTCGGCCCGGCCGTGGTGTCGGGTGTGTGGAAGGACCACT
ACGTGTGGTGGCTGGGGCCGATGCTAGGCGGACTCATCGCAGGAGGACTT
TACAGCGCCCTCGGCTCCCAGGCCACGTGCGTAAGACAAGCGGAGCCGGC
GGTGACACGGCAGGTCACGTGGGAGGTTCTGGAGGTGTCCGATAGGGAGA
CGTCATTATGAATGGCGTCTGAGTCAGACAGCATTCTCACGGTCAACAGC
CCGAGAGGCAAAAAGGCAGAAGCGCCTCCTAGCTCCTGGTACGAGAAGTA
CATCCAGCCGTGCATTGCGGAATTCGTCGGACTGATCGTCTTTGCGTTCG
TCGGAACCATGGTGACGGGATATGCCGGTATGGGTGGCCCCACTTGGCTT
GTCGGAATCGCCCTGGCACACGGGCTGACTATAGCCCTGCTCATCGTGGG
TATGGGGCATATCAGTGGAGGTCACTTTAACCCTGCCGTGACCTTGGGAG
TGACCTTGGCGGGAGGCATCCACCCGTTGCTGGCAGGAGGCTACGGTATC
AGTCAACTGATGGGTTCTATGATTGGAGCTGCATTCACCAAGGCGATCCT
ACCCAACGTAACTTACATTCAATGCAACGGCGGCACTCACAGTATCGGTG
CCGGTGTGTCAGTGGGCGGGGCTATCCTGTGTGAGGCCATCCTGACTATG
ACTCTGGTGATGACCGTCATCATGTCAGCTGTAGACTCCGCCTCTAAAGG
GAAGGCTCTTCCACCTCTCGCCATCGGGCTGGCCGTGCTCACCGGCATCC
TAGCCGGCGGCCCGTTCTCCGGAGCGTCCATGAACCCAGCCCGCGCGTTC
GGCCCGGCCGTGGTGTCGGGTGTGTGGAAGGACCACTACGTGTGGTGGCT
GGGGCCGATGCTAGGCGGACTCATCGCAGGAGGACTTTACAGCGCCCTCG
GCTCCCAGGCCACGTGCGTAAGACAAGCGGAGCCGGCGGTGACACGGCAG
GTCACGTGGGAGGTTCTGGAGGTGTCCGATAGGGAGACGTCATTATGAAT
GGCGTCTGAGTCAGACAGCATTCTCACGGTCAACAGCCCGAGAGGCAAAA
AGGCAGAAGCGCCTCCTAGCTCCTGGTACGAGAAGTACATCCAGCCGTGC
ATTGCGGAATTCGTCGGACTGATCGTCTTTGCGTTCGTCGGAACCATGGT
GACGGGATATGCCGGTATGGGTGGCCCCACTTGGCTTGTCGGAATCGCCC
TGGCACACGGGCTGACTATAGCCCTGCTCATCGTGGGTATGGGGCATATC
AGTGGAGGTCACTTTAACCCTGCCGTGACCTTGGGAGTGACCTTGGCGGG
AGGCATCCACCCGTTGCTGGCAGGAGGCTACGGTATCAGTCAACTGATGG
GTTCTATGATTGGAGCTGCATTCACCAAGGCGATCCTACCCAACGTAACT
TACATTCAATGCAACGGCGGCACTCACAGTATCGGTGCCGGTGTGTCAGT
GGGCGGGGCTATCCTGTGTGAGGCCATCCTGACTATGACTCTGGTGATGA
CCGTCATCATGTCAGCTGTAGACTCCGCCTCTAAAGGGAAGGCTCTTCCA
CCTCTCGCCATCGGGCTGGCCGTGCTCACCGGCATCCTAGCCGGCGGCCC
GTTCTCCGGAGCGTCCATGAACCCAGCCCGCGCGTTCGGCCCGGCCGTGG
TGTCGGGTGTGTGGAAGGACCACTACGTGTGGTGGCTGGGGCCGATGCTA
GGCGGACTCATCGCAGGAGGACTTTACAGCGCCCTCGGCTCCCAGGCCAC
GTGCGTAAGACAAGCGGAGCCGGCGGTGACACGGCAGGTCACGTGGGAGG
TTCTGGAGGTGTCCGATAGGGAGACGTCATTATGAATGGCGTCTGAGTCA
GACAGCATTCTCACGGTCAACAGCCCGAGAGGCAAAAAGGCAGAAGCGCC
TCCTAGCTCCTGGTACGAGAAGTACATCCAGCCGTGCATTGCGGAATTCG
TCGGACTGATCGTCTTTGCGTTCGTCGGAACCATGGTGACGGGATATGCC
GGTATGGGTGGCCCCACTTGGCTTGTCGGAATCGCCCTGGCACACGGGCT
GACTATAGCCCTGCTCATCGTGGGTATGGGGCATATCAGTGGAGGTCACT
TTAACCCTGCCGTGACCTTGGGAGTGACCTTGGCGGGAGGCATCCACCCG
TTGCTGGCAGGAGGCTACGGTATCAGTCAACTGATGGGTTCTATGATTGG
AGCTGCATTCACCAAGGCGATCCTACCCAACGTAACTTACATTCAATGCA
ACGGCGGCACTCACAGTATCGGTGCCGGTGTGTCAGTGGGCGGGGCTATC
CTGTGTGAGGCCATCCTGACTATGACTCTGGTGATGACCGTCATCATGTC
AGCTGTAGACTCCGCCTCTAAAGGGAAGGCTCTTCCACCTCTCGCCATCG
GGCTGGCCGTGCTCACCGGCATCCTAGCCGGCGGCCCGTTCTCCGGAGCG
TCCATGAACCCAGCCCGCGCGTTCGGCCCGGCCGTGGTGTCGGGTGTGTG
GAAGGACCACTACGTGTGGTGGCTGGGGCCGATGCTAGGCGGACTCATCG
CAGGAGGACTTTACAGCGCCCTCGGCTCCCAGGCCACGTGCGTAAGACAA
GCGGAGCCGGCGGTGACACGGCAGGTCACGTGGGAGGTTCTGGAGGTGTC
CGATAGGGAGACGTCATTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000033 | genome | Sc0000033:1748004..1752026 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95382_evm0 |
| Biotype | protein_coding |
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