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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95291_evm2 >transcript:BL95291_evm2-protein ID=transcript:BL95291_evm2-protein|Name=transcript:BL95291_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=330bp
MEVLTLLEIIAVLWVTYLVVTWWLERGRISQLTDKTVLITGCDTGFGNLL
ARRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIQMDVTSSDSVQDAFR
VVKEAVGSKGLWGLVNNAGILGVGGGTMEWATKEDYQAVLKVNLLGMIDV
TKTFLPLLKTSRGRVVNVASYVGRLALPYSGPYSVSKYGVEAFSDSLRRA
MRCFGVKVHIIEPGTFRTELSNLEVILRRLDHTWQQQSPETKAEYGEEFL
QAAKDMIASLDSVLKDPVAVVDAMEHALCATHPRSRYVVGWDARFTLVPI
SWLPTDLGDLVLRLMAPNIMPTPACCKNGH Run BLAST on NCBI mRNA from alignment at Sc0000017:3125494..3128185- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95291_evm2 ID=transcript:BL95291_evm2|Name=transcript:BL95291_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2692bp|location=Sequence derived from alignment at Sc0000017:3125494..3128185- (Branchiostoma lanceolatum)
ATGGAGGTGCTAACGTTACTTGAGATCATCGCTGTCCTGTGGGTGACGTA
TTTAGTGGTTACTTGGTGGTTGGAGAGAGGACGCATATCACAGGTCAGTG
CAACAGAATGGATCATGAACTTTGTTTTGAACTGATATGTTGCACTCTAC
ATGTAGTTACTGCGAATACTGTAGAAGAAATATTTCATTTGCCAGTGTCC
AATGATTATATTACGTAGTTGTCACGTCATATTATTAACGTTTCACATTT
TAATGATTTGCAAGAAAATGTATTTTCAATAATCTACGCAGTTTTACTCG
AAATGTGGGCAGTTCATACTCTATTGCCTTCAAAGAAAAAGTCAAACATT
TGATCAGTAAACATACAACTGTGTCTCGTCTCTGAGACTTCCTCTAATTT
ATACATTGTATAACGCTACTTTTTATATGCCCTGTATCTAGATATATCTA
TCAATTTAAACTGGCCTTCAGACATGAATTTGCAATAAGTATGATTGACA
ATTATTGATTATGTGTCTTTCGTCCCTGTAGCTAACAGACAAGACCGTCC
TGATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTG
GACCAGCTCGGTCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGT
GGCAGAGTTACGGCAGTCCTGCTCCGAAAGACTGCAGCCGATCCAGATGG
ACGTCACCAGCTCAGACAGCGTACAAGATGCCTTCAGGGTGGTGAAGGAA
GCTGTGGGGAGTAAAGGTAGGAACGTTTCGGCAAAACGGTTCAACTTTAA
TTATCCTCTACCTTCTAGTCATATGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGCGTTTATGAATGTATTTTTCTTAAGTAGACACCACTGAAACAC
CATTTTTTCTGTTGCCTGTAAGTTTTATGTACTTTGTAGGTTTGTGGGGG
CTGGTGAACAATGCGGGTATTCTCGGTGTTGGGGGAGGAACCATGGAGTG
GGCGACAAAGGAAGATTATCAGGTTTGTTTAATAGTTTTTCTATACTTCA
ATACAATAAACGTCTGTCACTCATAAAAGAAAGAAACACATATTGTGTAG
TTGTCTAATTTCATCTTTCCCTGTCCCTTTTGCATCAACAGGCCGTTCTG
AAGGTGAACTTGCTGGGGATGATTGACGTCACCAAGACATTTCTCCCCCT
TCTCAAGACGTCACGTGGTCGGGTCGTCAACGTCGCAAGTTATGTGGGGA
GACTGGCCCTGCCATATAGTGGACCTTACTCTGTGTCTAAATATGGCGTT
GAGGCATTTTCCGATTCTCTGAGGTAAACACTTGCATTTTGCACATTTTC
CTTACCCTCAGCCCGGCCTCTTTTAAACTTATCTTATGATAGCAATGGAA
AGCTTCTTACAAATAAGAAACTTTGTTGCATTTTGCTGAAGAAATGGAAG
CTTTCTTTTCGTTCTCTTTAGCAAAAAGGTTTCCTTCAAAGGTTGATACT
TCCTTCAAATTCACATTTGCCTAGACGCGCTATGAGATGCTTTGGGGTCA
AAGTTCACATCATTGAGCCTGGGACCTTCAGGACCGAACTCTCCAATCTG
GAGGTCATCCTGCGTCGTCTGGACCACACCTGGCAACAGCAGAGTCCGGA
GACGAAGGCCGAGTATGGAGAGGAATTCCTGCAAGCTGGTCAGTTAATCA
TTAGTACTGACTTTCTTTTACTGTTAACCAACACAATGGTTGAGCCATCA
GTTCTTCATCAGGAATTTGGCCAAGTTTTCTGTCGCACACTGATCGTCCG
AATGTGTGACGTCATGAGTAGGTCAAAGGTTCCCGAAGTTGATACCTACC
GCCGTCCCGGCTCAACGTGGGTTGAGGCGTCCTAATAAGGCAAATTGCTG
TAAAAATATCACTATGCACTGAAATGTTCTCATGCGGGCGAGTACTGAAA
ATGTATTTCTTCTACTGACGTCATATTTGTTCGACGCTGTTACAAGTCAG
ACCATGTGTTGTTGTCCAAACATCCCTGTATTCAGAATTACGATGCCGTG
GATTTTAGTGCTACATACCAATTATAAAAGAAGACTTGGTAGAGACGTCA
TCCCAGGACTTGTACAAGTAAATAGATCATCTATCATAGAATTATGGAGA
ATCGGATCCTTTACAAGCAAATACATCATCAGAATGTTTTATTTCTTTCT
TGACAGCAAAAGACATGATAGCGTCTCTGGATAGTGTCCTGAAAGATCCG
GTTGCCGTTGTGGATGCGATGGAGCATGCGCTGTGCGCTACCCACCCCCG
GAGCCGTTACGTGGTTGGTTGGGACGCCCGTTTCACACTTGTTCCAATTT
CCTGGCTGCCCACTGACCTGGGTGATCTGGTCTTACGGCTGATGGCACCC
AACATAATGCCTACACCGGCCTGCTGTAAGAATGGGCATTAG Coding sequence (CDS) from alignment at Sc0000017:3125494..3128185- >transcript:BL95291_evm2 ID=transcript:BL95291_evm2|Name=transcript:BL95291_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=5958bp|location=Sequence derived from alignment at Sc0000017:3125494..3128185- (Branchiostoma lanceolatum)
ATGGAGGTGCTAACGTTACTTGAGATCATCGCTGTCCTGTGGGTGACGTA
TTTAGTGGTTACTTGGTGGTTGGAGAGAGGACGCATATCACAGCTAACAG
ACAAGACCGTCCTGATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTG
GCCAGGCGGCTGGACCAGCTCGGTCTGCGGGTGTTCGCGGGCTGTCTGAC
CGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAAAGACTGCAGC
CGATCCAGATGGACGTCACCAGCTCAGACAGCGTACAAGATGCCTTCAGG
GTGGTGAAGGAAGCTGTGGGGAGTAAAGGTTTGTGGGGGCTGGTGAACAA
TGCGGGTATTCTCGGTGTTGGGGGAGGAACCATGGAGTGGGCGACAAAGG
AAGATTATCAGGCCGTTCTGAAGGTGAACTTGCTGGGGATGATTGACGTC
ACCAAGACATTTCTCCCCCTTCTCAAGACGTCACGTGGTCGGGTCGTCAA
CGTCGCAAGTTATGTGGGGAGACTGGCCCTGCCATATAGTGGACCTTACT
CTGTGTCTAAATATGGCGTTGAGGCATTTTCCGATTCTCTGAGACGCGCT
ATGAGATGCTTTGGGGTCAAAGTTCACATCATTGAGCCTGGGACCTTCAG
GACCGAACTCTCCAATCTGGAGGTCATCCTGCGTCGTCTGGACCACACCT
GGCAACAGCAGAGTCCGGAGACGAAGGCCGAGTATGGAGAGGAATTCCTG
CAAGCTGCAAAAGACATGATAGCGTCTCTGGATAGTGTCCTGAAAGATCC
GGTTGCCGTTGTGGATGCGATGGAGCATGCGCTGTGCGCTACCCACCCCC
GGAGCCGTTACGTGGTTGGTTGGGACGCCCGTTTCACACTTGTTCCAATT
TCCTGGCTGCCCACTGACCTGGGTGATCTGGTCTTACGGCTGATGGCACC
CAACATAATGCCTACACCGGCCTGCTGTAAGAATGGGCATTAGATGGAGG
TGCTAACGTTACTTGAGATCATCGCTGTCCTGTGGGTGACGTATTTAGTG
GTTACTTGGTGGTTGGAGAGAGGACGCATATCACAGCTAACAGACAAGAC
CGTCCTGATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGC
GGCTGGACCAGCTCGGTCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCC
GGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAAAGACTGCAGCCGATCCA
GATGGACGTCACCAGCTCAGACAGCGTACAAGATGCCTTCAGGGTGGTGA
AGGAAGCTGTGGGGAGTAAAGGTTTGTGGGGGCTGGTGAACAATGCGGGT
ATTCTCGGTGTTGGGGGAGGAACCATGGAGTGGGCGACAAAGGAAGATTA
TCAGGCCGTTCTGAAGGTGAACTTGCTGGGGATGATTGACGTCACCAAGA
CATTTCTCCCCCTTCTCAAGACGTCACGTGGTCGGGTCGTCAACGTCGCA
AGTTATGTGGGGAGACTGGCCCTGCCATATAGTGGACCTTACTCTGTGTC
TAAATATGGCGTTGAGGCATTTTCCGATTCTCTGAGACGCGCTATGAGAT
GCTTTGGGGTCAAAGTTCACATCATTGAGCCTGGGACCTTCAGGACCGAA
CTCTCCAATCTGGAGGTCATCCTGCGTCGTCTGGACCACACCTGGCAACA
GCAGAGTCCGGAGACGAAGGCCGAGTATGGAGAGGAATTCCTGCAAGCTG
CAAAAGACATGATAGCGTCTCTGGATAGTGTCCTGAAAGATCCGGTTGCC
GTTGTGGATGCGATGGAGCATGCGCTGTGCGCTACCCACCCCCGGAGCCG
TTACGTGGTTGGTTGGGACGCCCGTTTCACACTTGTTCCAATTTCCTGGC
TGCCCACTGACCTGGGTGATCTGGTCTTACGGCTGATGGCACCCAACATA
ATGCCTACACCGGCCTGCTGTAAGAATGGGCATTAGATGGAGGTGCTAAC
GTTACTTGAGATCATCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTT
GGTGGTTGGAGAGAGGACGCATATCACAGCTAACAGACAAGACCGTCCTG
ATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGA
CCAGCTCGGTCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGTGG
CAGAGTTACGGCAGTCCTGCTCCGAAAGACTGCAGCCGATCCAGATGGAC
GTCACCAGCTCAGACAGCGTACAAGATGCCTTCAGGGTGGTGAAGGAAGC
TGTGGGGAGTAAAGGTTTGTGGGGGCTGGTGAACAATGCGGGTATTCTCG
GTGTTGGGGGAGGAACCATGGAGTGGGCGACAAAGGAAGATTATCAGGCC
GTTCTGAAGGTGAACTTGCTGGGGATGATTGACGTCACCAAGACATTTCT
CCCCCTTCTCAAGACGTCACGTGGTCGGGTCGTCAACGTCGCAAGTTATG
TGGGGAGACTGGCCCTGCCATATAGTGGACCTTACTCTGTGTCTAAATAT
GGCGTTGAGGCATTTTCCGATTCTCTGAGACGCGCTATGAGATGCTTTGG
GGTCAAAGTTCACATCATTGAGCCTGGGACCTTCAGGACCGAACTCTCCA
ATCTGGAGGTCATCCTGCGTCGTCTGGACCACACCTGGCAACAGCAGAGT
CCGGAGACGAAGGCCGAGTATGGAGAGGAATTCCTGCAAGCTGCAAAAGA
CATGATAGCGTCTCTGGATAGTGTCCTGAAAGATCCGGTTGCCGTTGTGG
ATGCGATGGAGCATGCGCTGTGCGCTACCCACCCCCGGAGCCGTTACGTG
GTTGGTTGGGACGCCCGTTTCACACTTGTTCCAATTTCCTGGCTGCCCAC
TGACCTGGGTGATCTGGTCTTACGGCTGATGGCACCCAACATAATGCCTA
CACCGGCCTGCTGTAAGAATGGGCATTAGATGGAGGTGCTAACGTTACTT
GAGATCATCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTTGGTGGTT
GGAGAGAGGACGCATATCACAGCTAACAGACAAGACCGTCCTGATCACGG
GGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTC
GGTCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTT
ACGGCAGTCCTGCTCCGAAAGACTGCAGCCGATCCAGATGGACGTCACCA
GCTCAGACAGCGTACAAGATGCCTTCAGGGTGGTGAAGGAAGCTGTGGGG
AGTAAAGGTTTGTGGGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGG
GGGAGGAACCATGGAGTGGGCGACAAAGGAAGATTATCAGGCCGTTCTGA
AGGTGAACTTGCTGGGGATGATTGACGTCACCAAGACATTTCTCCCCCTT
CTCAAGACGTCACGTGGTCGGGTCGTCAACGTCGCAAGTTATGTGGGGAG
ACTGGCCCTGCCATATAGTGGACCTTACTCTGTGTCTAAATATGGCGTTG
AGGCATTTTCCGATTCTCTGAGACGCGCTATGAGATGCTTTGGGGTCAAA
GTTCACATCATTGAGCCTGGGACCTTCAGGACCGAACTCTCCAATCTGGA
GGTCATCCTGCGTCGTCTGGACCACACCTGGCAACAGCAGAGTCCGGAGA
CGAAGGCCGAGTATGGAGAGGAATTCCTGCAAGCTGCAAAAGACATGATA
GCGTCTCTGGATAGTGTCCTGAAAGATCCGGTTGCCGTTGTGGATGCGAT
GGAGCATGCGCTGTGCGCTACCCACCCCCGGAGCCGTTACGTGGTTGGTT
GGGACGCCCGTTTCACACTTGTTCCAATTTCCTGGCTGCCCACTGACCTG
GGTGATCTGGTCTTACGGCTGATGGCACCCAACATAATGCCTACACCGGC
CTGCTGTAAGAATGGGCATTAGATGGAGGTGCTAACGTTACTTGAGATCA
TCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTTGGTGGTTGGAGAGA
GGACGCATATCACAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTGA
CACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGTCTGC
GGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCAG
TCCTGCTCCGAAAGACTGCAGCCGATCCAGATGGACGTCACCAGCTCAGA
CAGCGTACAAGATGCCTTCAGGGTGGTGAAGGAAGCTGTGGGGAGTAAAG
GTTTGTGGGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGGGGGAGGA
ACCATGGAGTGGGCGACAAAGGAAGATTATCAGGCCGTTCTGAAGGTGAA
CTTGCTGGGGATGATTGACGTCACCAAGACATTTCTCCCCCTTCTCAAGA
CGTCACGTGGTCGGGTCGTCAACGTCGCAAGTTATGTGGGGAGACTGGCC
CTGCCATATAGTGGACCTTACTCTGTGTCTAAATATGGCGTTGAGGCATT
TTCCGATTCTCTGAGACGCGCTATGAGATGCTTTGGGGTCAAAGTTCACA
TCATTGAGCCTGGGACCTTCAGGACCGAACTCTCCAATCTGGAGGTCATC
CTGCGTCGTCTGGACCACACCTGGCAACAGCAGAGTCCGGAGACGAAGGC
CGAGTATGGAGAGGAATTCCTGCAAGCTGCAAAAGACATGATAGCGTCTC
TGGATAGTGTCCTGAAAGATCCGGTTGCCGTTGTGGATGCGATGGAGCAT
GCGCTGTGCGCTACCCACCCCCGGAGCCGTTACGTGGTTGGTTGGGACGC
CCGTTTCACACTTGTTCCAATTTCCTGGCTGCCCACTGACCTGGGTGATC
TGGTCTTACGGCTGATGGCACCCAACATAATGCCTACACCGGCCTGCTGT
AAGAATGGGCATTAGATGGAGGTGCTAACGTTACTTGAGATCATCGCTGT
CCTGTGGGTGACGTATTTAGTGGTTACTTGGTGGTTGGAGAGAGGACGCA
TATCACAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTGACACCGGC
TTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGTCTGCGGGTGTT
CGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCT
CCGAAAGACTGCAGCCGATCCAGATGGACGTCACCAGCTCAGACAGCGTA
CAAGATGCCTTCAGGGTGGTGAAGGAAGCTGTGGGGAGTAAAGGTTTGTG
GGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGGGGGAGGAACCATGG
AGTGGGCGACAAAGGAAGATTATCAGGCCGTTCTGAAGGTGAACTTGCTG
GGGATGATTGACGTCACCAAGACATTTCTCCCCCTTCTCAAGACGTCACG
TGGTCGGGTCGTCAACGTCGCAAGTTATGTGGGGAGACTGGCCCTGCCAT
ATAGTGGACCTTACTCTGTGTCTAAATATGGCGTTGAGGCATTTTCCGAT
TCTCTGAGACGCGCTATGAGATGCTTTGGGGTCAAAGTTCACATCATTGA
GCCTGGGACCTTCAGGACCGAACTCTCCAATCTGGAGGTCATCCTGCGTC
GTCTGGACCACACCTGGCAACAGCAGAGTCCGGAGACGAAGGCCGAGTAT
GGAGAGGAATTCCTGCAAGCTGCAAAAGACATGATAGCGTCTCTGGATAG
TGTCCTGAAAGATCCGGTTGCCGTTGTGGATGCGATGGAGCATGCGCTGT
GCGCTACCCACCCCCGGAGCCGTTACGTGGTTGGTTGGGACGCCCGTTTC
ACACTTGTTCCAATTTCCTGGCTGCCCACTGACCTGGGTGATCTGGTCTT
ACGGCTGATGGCACCCAACATAATGCCTACACCGGCCTGCTGTAAGAATG
GGCATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000017 | genome | Sc0000017:3125494..3128185 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95291_evm2 |
| Biotype | protein_coding |
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