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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95290_evm3 >transcript:BL95290_evm3-protein ID=transcript:BL95290_evm3-protein|Name=transcript:BL95290_evm3|organism=Branchiostoma lanceolatum|type=polypeptide|length=330bp
MEVFTLLEVIAVLWVTYLVVTWWLERGRLSQLTDKTVLITGCDTGFGNLL
ARRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIQMDVTSSDSIQDAFR
VVNEAVGSKGLWGLVNNAGILGVAGGTMEWATLEDYQAVLNVNLLGMIDV
TKTFLPLLKRSRGRVVNVASGAGRVAMPHGGPYTVSKYGVEAFADSLRRA
MRCFGVKVHIIEPGFFRTEINNQEFALRRIDHIWERQSPETKAEYGEDFL
QAGKDAIVASDRFMQDPVAVVDAMEHALCATHPRSRYVVGWDARFMFIPI
SWLTTDLGDLAVRLVAPEMTPTPACCENGQ Run BLAST on NCBI mRNA from alignment at Sc0000017:3116539..3119673- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95290_evm3 ID=transcript:BL95290_evm3|Name=transcript:BL95290_evm3|organism=Branchiostoma lanceolatum|type=mRNA|length=3135bp|location=Sequence derived from alignment at Sc0000017:3116539..3119673- (Branchiostoma lanceolatum)
ATGGAGGTGTTCACGTTACTTGAGGTCATCGCTGTCCTGTGGGTGACGTA
TTTAGTGGTTACTTGGTGGTTGGAGAGAGGACGCCTATCACAGGTTAGTG
CAACAGAGCGACAGACTTCAATCTTATCTCTGATATGTATAGTCCATTGT
TTACCACAATTTGGCACCACCTGCCTCTTCGTGTGACCTTCAGTGTGACA
TATTTTTCCTGCCCTCGAGACATACACTTAGGCATATGTGCAAGGTTGAA
CAACTACATTGTAAGTCGTGGCCTACTTCTGGAAAACGATCTAGTATCTA
TGTTTGAATGGTAAATGTAGTTCATTATTGCCAAAACAAGTCCATTGTCA
TGCTAGACAACAGTTTTACTATTTTTGGAGATGTCTGTTGACATTGTTAT
ATATATATATATATATATATCAATGGGCTGAGTCTTTGTAAAAGATGTTG
TAAACATTCAAAAATACGTTTAAATGGGAAGCGGCAAATAAGTTTATGTT
TGGGAGTGGCGTCCGACAAAACTTCTTGAGCAAAAGATGTCTTTCGTCCC
TGTAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTGACACCGGCTTC
GGGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGCCTGCGGGTGTTCGC
GGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCTCCG
AACGGCTGCAGCCGATCCAGATGGACGTCACCAGCTCAGACAGCATACAG
GATGCCTTCAGGGTGGTGAATGAAGCTGTGGGGAGTAAAGGTAGGAGACT
TTTAGCAAGATATTTCTAGCTTTGTGCCACATATAATTGTTTAAGCTATA
TCCTAACAGTCATCATTAAATCAAAATATATGGAATTTATTCCGCATTTC
AAGATATTCTTCATGAGAAATGTAGATAACACTAAAATTGTACGTCAAAC
TGTTCTTTTCTGTTGCCCGCAAGTAAACACATGATACTGTTTCTGAAATG
GTTTTGTTCTGAAGTTATTATATCACAAGTTTTGTCTTCTTTCTAGGTCT
GTGGGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGCGGGAGGAACCA
TGGAGTGGGCGACCCTGGAAGACTATCAGGTATCTGTACGTCTAAAACTC
ATAAAAGACAGAATGAAAAGTGACAAGAGTTCGGCGACCTCATACCTCCA
TGAAATGTTTAGAGCTTTTGAAAATTTGATGCAAATGACTTACACATTTA
CATAATTTATTCATGATGTTCACCTAGAGCTTACTTGCGCATGTCACATG
TATAAAATACCCATCATCTATAGATAAGCAGTTTTGCAATTTTTGTATCA
ATTATGCAAATCAGTTCTTCATGTAGATATTTGGTATCTGTTTATGTTCC
ACCTGCAATGAATTACATGTGTCACATTTATTGAAGTCCAGTTATGGAAA
ACAAAGGAATACCTGCATGCCTAATATGATGGAAATCCGTATTTTCTTTC
TTCAGTTATCTCTTAAGCTTTTGAACATTTTGACAAAAACGCTCCTGCAG
TTCCAACATTGAATGTTGGAGGGCTCAAACCTACTCCATTCTTGCCTGAT
GTCAAAAGCCACCTGTCGCCCAAATGTCGAGGCCGTAGCATGTCCGGGAC
AAGAGATGTATTGAAAATACTGCTTTGAAAGAATTTCCTAATTGCTACTG
AAAATATAACCTCCATAACATTTCATGGAGGTAAAAATTGAGCCGTTCCT
TAATTTCATCTTTCCCTGTGCCTTTTGCATCATCAGGCCGTTCTGAACGT
GAACTTGCTGGGGATGATTGACGTCACCAAGACATTTCTCCCCCTCCTCA
AGAGGTCACGTGGTCGTGTCGTCAATGTCGCAAGTGGTGCTGGGAGAGTG
GCCATGCCGCATGGCGGACCTTACACCGTGTCCAAATATGGCGTGGAGGC
ATTTGCTGACTCTCTGAGGTGAAAAGTAACTGAAAAGTCCTAGCTATCAG
CTTCTGTTTTAAACTGGTCTTAGACTTGTCTCGACAAAACGTGAGATGAT
ACGCTTCTTAAAATTGAGTAAATTGTTCACCAGTCCTCAAATTCTGTTGA
AGAAATAGATGGTTCGATTCTTTTGGTTCCCGCTAATGAATTAAACAGTT
CCTCAAATGGTTAACACTATATTTAACTTTCTATATACCTAGACGGGCTA
TGAGATGCTTTGGGGTCAAAGTTCACATCATCGAGCCTGGCTTCTTCCGG
ACCGAAATCAACAACCAGGAGTTCGCCCTGCGTCGTATAGACCATATCTG
GGAGCGTCAGAGTCCGGAGACGAAGGCTGAGTACGGAGAAGATTTCCTAC
AAGCCGGTCAGTTAATGTCTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTTGTATTTACTGTTATTCAATCAGACA
CATGATTCACCACATCTTCGTCAGGATTTGGCCCACTTTTCTGACGCGCA
CCGATCTTCGGGTTCTGTGACGTCAGGAGGATGTAGTAAATCAAAGGTGT
CCAGAAGTCGATACCTACCACCGTTCTGGTTCGACATGTGTTGATAGGCA
AAAAAGGAAACATTAAAATGTGCTGACGGTATGATATCTCCTGTATGTAG
ACGAGTACGGAAAACACTTCAACTCAACTTTGTTTCGACGCTGTTACAAA
TCAAATCATTTGTTAATCAAACATTTCTGAATTCAACTTACCGTGTGCCC
TTCATTTAGAGCTGAGATGTTCAAAAGGACTTGGTAAAGATACCTTTGCC
GGAGGTACAAGTCAATAGATAAGCTTATGTTGCAGTTGAAATTATGGAAA
AATGGACTCTATACAAGGAAATAACCAGAATGTTTTTTTTTCTTGACAGG
AAAGGACGCTATAGTCGCTTCAGATCGTTTCATGCAAGACCCAGTTGCCG
TTGTGGATGCGATGGAGCATGCGCTGTGCGCTACCCACCCCCGGAGCCGT
TACGTGGTTGGTTGGGACGCCCGTTTCATGTTTATACCGATTTCATGGCT
AACCACCGACCTGGGTGATCTGGCCGTCCGCCTGGTGGCACCGGAAATGA
CGCCTACACCAGCCTGCTGTGAGAATGGACAATAG Coding sequence (CDS) from alignment at Sc0000017:3116539..3119673- >transcript:BL95290_evm3 ID=transcript:BL95290_evm3|Name=transcript:BL95290_evm3|organism=Branchiostoma lanceolatum|type=CDS|length=5958bp|location=Sequence derived from alignment at Sc0000017:3116539..3119673- (Branchiostoma lanceolatum)
ATGGAGGTGTTCACGTTACTTGAGGTCATCGCTGTCCTGTGGGTGACGTA
TTTAGTGGTTACTTGGTGGTTGGAGAGAGGACGCCTATCACAGCTAACAG
ACAAGACCGTCCTGATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTG
GCCAGGCGGCTGGACCAGCTCGGCCTGCGGGTGTTCGCGGGCTGTCTGAC
CGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAACGGCTGCAGC
CGATCCAGATGGACGTCACCAGCTCAGACAGCATACAGGATGCCTTCAGG
GTGGTGAATGAAGCTGTGGGGAGTAAAGGTCTGTGGGGGCTGGTGAACAA
TGCGGGTATTCTCGGTGTTGCGGGAGGAACCATGGAGTGGGCGACCCTGG
AAGACTATCAGGCCGTTCTGAACGTGAACTTGCTGGGGATGATTGACGTC
ACCAAGACATTTCTCCCCCTCCTCAAGAGGTCACGTGGTCGTGTCGTCAA
TGTCGCAAGTGGTGCTGGGAGAGTGGCCATGCCGCATGGCGGACCTTACA
CCGTGTCCAAATATGGCGTGGAGGCATTTGCTGACTCTCTGAGACGGGCT
ATGAGATGCTTTGGGGTCAAAGTTCACATCATCGAGCCTGGCTTCTTCCG
GACCGAAATCAACAACCAGGAGTTCGCCCTGCGTCGTATAGACCATATCT
GGGAGCGTCAGAGTCCGGAGACGAAGGCTGAGTACGGAGAAGATTTCCTA
CAAGCCGGAAAGGACGCTATAGTCGCTTCAGATCGTTTCATGCAAGACCC
AGTTGCCGTTGTGGATGCGATGGAGCATGCGCTGTGCGCTACCCACCCCC
GGAGCCGTTACGTGGTTGGTTGGGACGCCCGTTTCATGTTTATACCGATT
TCATGGCTAACCACCGACCTGGGTGATCTGGCCGTCCGCCTGGTGGCACC
GGAAATGACGCCTACACCAGCCTGCTGTGAGAATGGACAATAGATGGAGG
TGTTCACGTTACTTGAGGTCATCGCTGTCCTGTGGGTGACGTATTTAGTG
GTTACTTGGTGGTTGGAGAGAGGACGCCTATCACAGCTAACAGACAAGAC
CGTCCTGATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGC
GGCTGGACCAGCTCGGCCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCC
GGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAACGGCTGCAGCCGATCCA
GATGGACGTCACCAGCTCAGACAGCATACAGGATGCCTTCAGGGTGGTGA
ATGAAGCTGTGGGGAGTAAAGGTCTGTGGGGGCTGGTGAACAATGCGGGT
ATTCTCGGTGTTGCGGGAGGAACCATGGAGTGGGCGACCCTGGAAGACTA
TCAGGCCGTTCTGAACGTGAACTTGCTGGGGATGATTGACGTCACCAAGA
CATTTCTCCCCCTCCTCAAGAGGTCACGTGGTCGTGTCGTCAATGTCGCA
AGTGGTGCTGGGAGAGTGGCCATGCCGCATGGCGGACCTTACACCGTGTC
CAAATATGGCGTGGAGGCATTTGCTGACTCTCTGAGACGGGCTATGAGAT
GCTTTGGGGTCAAAGTTCACATCATCGAGCCTGGCTTCTTCCGGACCGAA
ATCAACAACCAGGAGTTCGCCCTGCGTCGTATAGACCATATCTGGGAGCG
TCAGAGTCCGGAGACGAAGGCTGAGTACGGAGAAGATTTCCTACAAGCCG
GAAAGGACGCTATAGTCGCTTCAGATCGTTTCATGCAAGACCCAGTTGCC
GTTGTGGATGCGATGGAGCATGCGCTGTGCGCTACCCACCCCCGGAGCCG
TTACGTGGTTGGTTGGGACGCCCGTTTCATGTTTATACCGATTTCATGGC
TAACCACCGACCTGGGTGATCTGGCCGTCCGCCTGGTGGCACCGGAAATG
ACGCCTACACCAGCCTGCTGTGAGAATGGACAATAGATGGAGGTGTTCAC
GTTACTTGAGGTCATCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTT
GGTGGTTGGAGAGAGGACGCCTATCACAGCTAACAGACAAGACCGTCCTG
ATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGA
CCAGCTCGGCCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGTGG
CAGAGTTACGGCAGTCCTGCTCCGAACGGCTGCAGCCGATCCAGATGGAC
GTCACCAGCTCAGACAGCATACAGGATGCCTTCAGGGTGGTGAATGAAGC
TGTGGGGAGTAAAGGTCTGTGGGGGCTGGTGAACAATGCGGGTATTCTCG
GTGTTGCGGGAGGAACCATGGAGTGGGCGACCCTGGAAGACTATCAGGCC
GTTCTGAACGTGAACTTGCTGGGGATGATTGACGTCACCAAGACATTTCT
CCCCCTCCTCAAGAGGTCACGTGGTCGTGTCGTCAATGTCGCAAGTGGTG
CTGGGAGAGTGGCCATGCCGCATGGCGGACCTTACACCGTGTCCAAATAT
GGCGTGGAGGCATTTGCTGACTCTCTGAGACGGGCTATGAGATGCTTTGG
GGTCAAAGTTCACATCATCGAGCCTGGCTTCTTCCGGACCGAAATCAACA
ACCAGGAGTTCGCCCTGCGTCGTATAGACCATATCTGGGAGCGTCAGAGT
CCGGAGACGAAGGCTGAGTACGGAGAAGATTTCCTACAAGCCGGAAAGGA
CGCTATAGTCGCTTCAGATCGTTTCATGCAAGACCCAGTTGCCGTTGTGG
ATGCGATGGAGCATGCGCTGTGCGCTACCCACCCCCGGAGCCGTTACGTG
GTTGGTTGGGACGCCCGTTTCATGTTTATACCGATTTCATGGCTAACCAC
CGACCTGGGTGATCTGGCCGTCCGCCTGGTGGCACCGGAAATGACGCCTA
CACCAGCCTGCTGTGAGAATGGACAATAGATGGAGGTGTTCACGTTACTT
GAGGTCATCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTTGGTGGTT
GGAGAGAGGACGCCTATCACAGCTAACAGACAAGACCGTCCTGATCACGG
GGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTC
GGCCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTT
ACGGCAGTCCTGCTCCGAACGGCTGCAGCCGATCCAGATGGACGTCACCA
GCTCAGACAGCATACAGGATGCCTTCAGGGTGGTGAATGAAGCTGTGGGG
AGTAAAGGTCTGTGGGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGC
GGGAGGAACCATGGAGTGGGCGACCCTGGAAGACTATCAGGCCGTTCTGA
ACGTGAACTTGCTGGGGATGATTGACGTCACCAAGACATTTCTCCCCCTC
CTCAAGAGGTCACGTGGTCGTGTCGTCAATGTCGCAAGTGGTGCTGGGAG
AGTGGCCATGCCGCATGGCGGACCTTACACCGTGTCCAAATATGGCGTGG
AGGCATTTGCTGACTCTCTGAGACGGGCTATGAGATGCTTTGGGGTCAAA
GTTCACATCATCGAGCCTGGCTTCTTCCGGACCGAAATCAACAACCAGGA
GTTCGCCCTGCGTCGTATAGACCATATCTGGGAGCGTCAGAGTCCGGAGA
CGAAGGCTGAGTACGGAGAAGATTTCCTACAAGCCGGAAAGGACGCTATA
GTCGCTTCAGATCGTTTCATGCAAGACCCAGTTGCCGTTGTGGATGCGAT
GGAGCATGCGCTGTGCGCTACCCACCCCCGGAGCCGTTACGTGGTTGGTT
GGGACGCCCGTTTCATGTTTATACCGATTTCATGGCTAACCACCGACCTG
GGTGATCTGGCCGTCCGCCTGGTGGCACCGGAAATGACGCCTACACCAGC
CTGCTGTGAGAATGGACAATAGATGGAGGTGTTCACGTTACTTGAGGTCA
TCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTTGGTGGTTGGAGAGA
GGACGCCTATCACAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTGA
CACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGCCTGC
GGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCAG
TCCTGCTCCGAACGGCTGCAGCCGATCCAGATGGACGTCACCAGCTCAGA
CAGCATACAGGATGCCTTCAGGGTGGTGAATGAAGCTGTGGGGAGTAAAG
GTCTGTGGGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGCGGGAGGA
ACCATGGAGTGGGCGACCCTGGAAGACTATCAGGCCGTTCTGAACGTGAA
CTTGCTGGGGATGATTGACGTCACCAAGACATTTCTCCCCCTCCTCAAGA
GGTCACGTGGTCGTGTCGTCAATGTCGCAAGTGGTGCTGGGAGAGTGGCC
ATGCCGCATGGCGGACCTTACACCGTGTCCAAATATGGCGTGGAGGCATT
TGCTGACTCTCTGAGACGGGCTATGAGATGCTTTGGGGTCAAAGTTCACA
TCATCGAGCCTGGCTTCTTCCGGACCGAAATCAACAACCAGGAGTTCGCC
CTGCGTCGTATAGACCATATCTGGGAGCGTCAGAGTCCGGAGACGAAGGC
TGAGTACGGAGAAGATTTCCTACAAGCCGGAAAGGACGCTATAGTCGCTT
CAGATCGTTTCATGCAAGACCCAGTTGCCGTTGTGGATGCGATGGAGCAT
GCGCTGTGCGCTACCCACCCCCGGAGCCGTTACGTGGTTGGTTGGGACGC
CCGTTTCATGTTTATACCGATTTCATGGCTAACCACCGACCTGGGTGATC
TGGCCGTCCGCCTGGTGGCACCGGAAATGACGCCTACACCAGCCTGCTGT
GAGAATGGACAATAGATGGAGGTGTTCACGTTACTTGAGGTCATCGCTGT
CCTGTGGGTGACGTATTTAGTGGTTACTTGGTGGTTGGAGAGAGGACGCC
TATCACAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTGACACCGGC
TTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGCCTGCGGGTGTT
CGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCT
CCGAACGGCTGCAGCCGATCCAGATGGACGTCACCAGCTCAGACAGCATA
CAGGATGCCTTCAGGGTGGTGAATGAAGCTGTGGGGAGTAAAGGTCTGTG
GGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGCGGGAGGAACCATGG
AGTGGGCGACCCTGGAAGACTATCAGGCCGTTCTGAACGTGAACTTGCTG
GGGATGATTGACGTCACCAAGACATTTCTCCCCCTCCTCAAGAGGTCACG
TGGTCGTGTCGTCAATGTCGCAAGTGGTGCTGGGAGAGTGGCCATGCCGC
ATGGCGGACCTTACACCGTGTCCAAATATGGCGTGGAGGCATTTGCTGAC
TCTCTGAGACGGGCTATGAGATGCTTTGGGGTCAAAGTTCACATCATCGA
GCCTGGCTTCTTCCGGACCGAAATCAACAACCAGGAGTTCGCCCTGCGTC
GTATAGACCATATCTGGGAGCGTCAGAGTCCGGAGACGAAGGCTGAGTAC
GGAGAAGATTTCCTACAAGCCGGAAAGGACGCTATAGTCGCTTCAGATCG
TTTCATGCAAGACCCAGTTGCCGTTGTGGATGCGATGGAGCATGCGCTGT
GCGCTACCCACCCCCGGAGCCGTTACGTGGTTGGTTGGGACGCCCGTTTC
ATGTTTATACCGATTTCATGGCTAACCACCGACCTGGGTGATCTGGCCGT
CCGCCTGGTGGCACCGGAAATGACGCCTACACCAGCCTGCTGTGAGAATG
GACAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000017 | genome | Sc0000017:3116539..3119673 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95290_evm3 |
| Biotype | protein_coding |
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