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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95282_evm2 >transcript:BL95282_evm2-protein ID=transcript:BL95282_evm2-protein|Name=transcript:BL95282_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=341bp
MVLSTSITCTCILKYGIFHIFSFTDITPDNGQHVLVTGGAGYVGSTLVPI
LLQEGYLVTIYDIFNFGVFPLLPVAGHPRLRLKEGSITDVVKLAEAMADV
DAIVHLAAIVGFPACAANPEKAIKINKEGTENIVRLMKKGQRIVYSSTGS
CYGAVTGICTEETPISPLTLYGETKADGEKAVMAAGGVALRLATVFGASP
RLRLDLLVNDLTYKALSGHHFALYQASFRRTFLHIKDAAMAFAFSLRNYE
RMSGQAYNVGSETMNLTKAELAKKIQEFIPECVITLSDEGEDKDKRDYEV
SYAKLRSLGYNTTLTVDDGIRELVKVMPFLSDRELRTCSNV Run BLAST on NCBI mRNA from alignment at Sc0000017:1462366..1468075+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95282_evm2 ID=transcript:BL95282_evm2|Name=transcript:BL95282_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=5710bp|location=Sequence derived from alignment at Sc0000017:1462366..1468075+ (Branchiostoma lanceolatum)
ATTCCGGTCAATGACCTGGTAATGATAGGTGTTGACAAATTTTTGCAAGT
TTTAGTCTTCCCTGTTACATTTGCATGGTGAGGACTCTGTTCTTCAATGT
GAATCGTACCCAAAGGACCGATCATTGAAAAAGAACGATTAAACATACAA
GTTTTGCAATGCCATGAGGAACGATACTTGAAATTAAAAAATTTGACCCT
ACGTTAAGACGCCCAAGGTAACATAGTTCTGGCATGTGTCATAAGTTGGG
CAAGGCATGCGTCATTCGCACGTCACCTATGTATTTCATTCGTCATTCAT
ATACTTTGTGTATCATGACGCGCGAAAGATACACGTTATGACGTCTGCCG
TAGTTTTACAGGTGATTACAGCAATAACCTTTTCCTTGAGGCGATGGAGC
GAGCAATGCTATACTAGACCTGTAATAAGTAGCTCAAACGAATCTTTATG
AATAAAGAACTTCATGTTATAAGTTTTCTGTGCTTTCTTTTAAAGCATAA
TGTTACATCATAGATTATGGTGCGTTCATGAATTCACATGTTATACAAAT
CCAATTTTGTAAACGGTTTAAATTTTGAGGAAATGGGGCCTAAAATGGGG
GGATACATTAGGTTCAACATTCTGCTAATACAAAGGGAGATCTGTATGGT
AGTCCGAAAAAGACTGTCAGACGATAACAGATGACGTGATTCGATCAAAT
CGAGGTCAATCTTTTGTTCCCGTTCCGACGCAACCTAGTTGCTCGACTGG
TTGAACAAGTATTAAACCACTCCCATTTGTCAAAAGGTCAATCTGCAGAT
TAAATTAAAAATGACATCTAAGTATCCAATAGGGGAAGATGTACCACACC
ACACCCGTGGTAGGAGCCACCTCATTGGATGGTTGTCTGGTAATTACTTT
AATTGTGTCCTGGCGCTTTAAAGGCTGTCACTGGGTAATACCATTTGTGA
CAGGAAAAGTGACGCACTCCGAGTGTTCGACAGCACGACTTCAGACCACA
AACTTCAACCTCCGATTATCAGTTTTTCAACCATGGATAGGTAAGATACT
TTTCTTAGCGTAGGTTTAAATCTTTAAATGGTATATGTGGATTATTTGCA
TGATGTAACAAAGATATTGTTACTGTTAACAAGTCGCGATTACAAATACT
GCTATCTATCAATTCAGGTCTTAGAAAATTCCTTATTTTCTGGAACTCTC
GTTGATTAGAACTCATTTTCGCCAACTTCAGAAGAAGCATTTCTCACTAG
ATAGCTCTAAAATAACGCCTAAAGTTTTAGATTATGCAAAAGTTTCTTGT
GACGTAGTACTAGTACTAGTGACGCCAGGGTGTTTTACGCCGGATGGCAG
CCATATTGTATAACCATTGAACTATGTGGATACCGATTTGACTAGAAGTT
TTAAAAGCAGTTACAAATACTCCAAGGAGAGTGAAAAATTTGCAGTCACT
CGAGAATAAGCGCATAGTCTTGGTGCGTTGTTGCCAGTAGTCTGTTTAAG
TCTAGTTATATCCACCGAGCAAAAATTTTAGAAACTTGCCTTGTAATGAT
CCCTAATTTTGTATTGCGTGTTCATGCTACAATATAAGATTGATATGTCA
AAGAAAATTGACCCAAAACGGGGAAATTTATACGTTAAAACTTGGCTAAT
TTGGAAGAATAAATGGTTCTGTCTACTAGTATTACGTGTACATGTATACT
AAAATATGGTATATTTCATATCTTCAGCTTTACAGATATCACCCCAGACA
ATGGCCAGCACGTGTTGGTGACAGGCGGGGCAGGGTACGTCGGTTCAACC
CTCGTTCCAATCCTGCTACAGGAGGGCTATCTTGTCACCATCTACGACAT
CTTCAACTTCGGGGTGTTCCCACTTCTACCAGTGGCCGGACACCCCAGGT
TGAGGCTCAAGGAGGGCAGCATCACGGATGTCGTGAAACTGGCGGAGGCC
ATGGCTGATGTGGACGCCATAGTCCACTTGGCCGCCATCGTGGGGTTCCC
TGCCTGCGCAGCTAATCCAGAAAAGGCCATCAAAATCAACAAGGTAAGCA
AGCAAACATTCTATCGTGTGTTAAAAAACGATGAAATCGAAGTCGATCCT
ACTTGTCTTAAAGGCACCCAGAGCATTTTATGAGGCTTGAAAACTGGAAA
TATTCTAGTCGCTGTAATCTTGGTGAAATTGACATCTAATGCCACTGTTT
ACCACATTTGCGTGCGGATTTCTTATCAAAGATGCTCAAAAGCGGCACAA
AAATAAGCTACATGGTGATCTTTTAGTTTCACGCGCCTAGTGTAAATAGA
CCGATACCCCACCCACCTCCGTCAAAACGTAGAAATGCAAAATTAAACAT
AAAAATGCAAATATTAGACGGACCTGCAGTCGATCTCTCATTGGTCAAAC
CGCTAATTGTGATAGACAGTCAGTATCAGTCTTTTAGGGCTCGGATTTTC
TATCAATTCTCCCAACACAACGACGGTATATTTGCTCCTTTAATCTCGAT
GTGAAATGGTATAGTGTTACTGAAATTTACTATGTGTAGAAATGAGTAGA
AATTTGAGTTTTTCTAATTCGAGTTTCAAGCCTCATAAAATGCTCTGGAT
TCCTTTAACATATTCATGACGTTTTGCTCGACCTGTTGAACAAGGAACAG
CGACGTCAAAGGTCAACCAACACACACTTGTAAACATTACAGACAGTCAG
CGACTAGATTACAGATCGTGTAACTCGATGAAATTGAAGTCGATCCTTGT
CTGAACAGAGTTTATGTAAAAGCTCACTTGATAGGGAAGATAGACAAGCA
ACATACATATCATGTCATAACTAAGCGTTACATTTACGTTATTTTTGTGT
TTTAAACCGCTTGAATGTCTGTAAACAGTTGCAGTCAAAGAACAACTTAG
TTGAGCGAAATTTGATAGGGATAAAATGATATTTGTTAGACTCGAAAGTT
GAGAAGGAATTTAAACAAACAACACACATATTATTTTGTTACCTTTGCGT
GAACGTTGTGTTCTAACTTTTTGCATGTCTGTGTCAAACAACGTAGTTTA
GCAAACAGTGAACATTGATAAAGATAGAATGATAGTTGTTAGACTCAAAA
GTTGAGAAGGAATTTAAACAAACAACACACATTCTTTTATTATGTTACAT
TTGCGTTAAATTTGTGTGTCAACTTTTTGTGTGTCTGTAAACGGTTGCAG
CATATGTCAAACATATGTTAAGCATAACAAGTATGTTGAGCAAACTTTGA
TAGGGATAAAATGATAGTTGTCAAACTTGGCAGATGAGAAGGAAGTTATA
CAAATAACACACATGTTATTTAATTTTTGGTTAACCATAACTTTTTGTGC
GCTACCTTTTTTTTTAATAACCTGTCTAAAACATCAAGGTAAATTACCAA
AAATTGAACGTTGACATTGATAAAAGTTGTATTTGTTAGAATCAAAAATT
GAGAAGGAAGTTAGACAACACAAAAACTTTCTCCCGTGTTTTACCATATA
AAAGTACCGAGATAATTTTTGCTTGTCTGTGAACAATTATAGACAACATA
GTCAGACAACAAAGTCAATTAGCAAACATTGAACGTTGACAGGAATAAAA
GCTATATTTGTTATAATCGGAAATTAGGAGGAAAGCTAGACAACACAAAA
CCTTTCCCCTTTGTGTTACCACATAACAGCACCAAGACAATTTTTGCGTG
TGTGTGAACAATTTTAGACGGCATAGTTAGACAACAAGGTCAATTGGCAA
ACATTAAACGCCGTCAGAGATTTATAAAAAGGCAGTTGTCTAAAGGTTTA
TATAAAAGTTGGATACATTTTTTCAACATATTGCTTTGTCGTATGAAAAC
AAAATATGAACTTTTTGTATGCCTGAAATAATTCAAACTACTAGTACACA
CGCCAGACAAGCAAATTAAATTTTCCTTTTCATAAAACTTTGTTGACTTA
CCAAAAGCGTTTGAAAAATATTGCCCCAGGGCAGGTACAGATCAATGACA
GTATTCTATTGTGTCTTAAACTTTAGGAGGGCACAGAAAACATTGTCCGT
CTGATGAAGAAAGGTCAGCGCATTGTCTACTCATCCACCGGGTCATGCTA
CGGAGCGGTTACCGGGATCTGCACCGAGGAGACGCCGATCAGCCCACTGA
CTCTCTACGGTGAGACCAAGGCCGATGGAGAGAAGGCTGTCATGGCTGCC
GGAGGCGTGGCGCTCCGCCTGGCGACTGTCTTCGGAGCTTCACCGAGGCT
CCGTCTCGACTTGCTCGTCAACGACCTCACCTACAAGGCACTCAGCGGCC
ACCACTTCGCCTTGTATCAAGCCTCCTTTCGCCGCACCTTCTTACACATC
AAAGACGCGGCCATGGCCTTTGCGTTCTCTCTTAGGAACTACGAGAGGAT
GTCAGGGCAAGCTTATAACGTAGGGTCTGAAACCATGAACTTGACAAAGG
CTGAGCTAGCCAAAAAGATCCAGGAATTCATTCCTGAATGTGTGATCACT
TTGTCAGATGAGGGTGAGGATAAGGATAAGAGGGATTATGAAGTGTCCTA
TGCCAAGCTCCGTTCGCTGGGGTACAACACAACCCTCACTGTAGATGATG
GAATCCGTGAGCTTGTGAAAGTCATGCCTTTTCTGTCAGATAGGGAACTC
CGCACATGTAGCAATGTTTAAGCTCAAGTACACAAAAATGTATCACAGAG
TTACCATTCGAAACACTCTGTACAGATAAAAAACACTAATTTCTATACTT
TTCGCCCTGTCAGTCTAAGAAATTTCCAAATACCGAAACAGTATTTAAAT
CATGTTCTATATGGTTTGTAAAGCACTGAAATTAGAATCAGAACTGCTAA
GTATATGGATTTTGATACACACATAATGAAATAAACAAATCAAGGTGATA
GATTGAAATATAGCTTAAGCTCAGAAGAAGAAGTCATGTAGACAATGGGA
AAATTAGCTTAGCTTTCAAGACTATATATCTTAAAGTTAATTTTGGCAAT
GGAAATTGAGACATATAGCTGGATACATAAATTTGTGCTATAAGTTAAAT
TGTATGTATCTTATTGTTATGATTTAATAAGTTAAATCACAGTTTTCAAA
TTGTACATTGATTTTGCTTCTGTACGTTGGCAAACATGATTGTATTTGGG
TACTTAGATATATGTGCATGTCAGTCATCTAGGTGAATGTATTTAATATA
TATTACTAGTACTGTGTATCAAGGGTTAGAAACATAAAACATCAGAATGA
AATTTTCAATACTTGTCTGTGAAAATATATGCCATTGTTAAAGAATTTAA
GATGTGGTCGATGACGTAGGTTGTACCCTGTACAACCCGTCCAATCAGAG
GGCACGTAATCTAGGTGACAATCTCCAAGCAGATGTATGTATCCGGCTCA
GCGTTCTTGCAACATATAGTACGTCTTTCTTGTAGGGAACATTTTGAATT
TTTAGAAAAAGATGAAAACTTAAAAAGTAAAAAGTATATTAAAGAAAGAT
GTAGAAAATAGGTCGATGAAAGTTAGACATTAAGCCAGGTAATACAATGC
AAAAATTACCCAAATAACTAGCCTGGATGTCAGACTTCCAATCTTTAAAA
TATCTATCGTGTTGTGGATATTTTAGAGATTGGGAGTCTGCCATCTAGGC
TACCAAATAACTGGATAAAAGGTAGTCCCATAGCCTTTTTGAGGCCATAG
GGGCAGTGGG Coding sequence (CDS) from alignment at Sc0000017:1462366..1468075+ >transcript:BL95282_evm2 ID=transcript:BL95282_evm2|Name=transcript:BL95282_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=2052bp|location=Sequence derived from alignment at Sc0000017:1462366..1468075+ (Branchiostoma lanceolatum)
ATGGTTCTGTCTACTAGTATTACGTGTACATGTATACTAAAATATGGTAT
ATTTCATATCTTCAGCTTTACAGATATCACCCCAGACAATGGCCAGCACG
TGTTGGTGACAGGCGGGGCAGGGTACGTCGGTTCAACCCTCGTTCCAATC
CTGCTACAGGAGGGCTATCTTGTCACCATCTACGACATCTTCAACTTCGG
GGTGTTCCCACTTCTACCAGTGGCCGGACACCCCAGGTTGAGGCTCAAGG
AGGGCAGCATCACGGATGTCGTGAAACTGGCGGAGGCCATGGCTGATGTG
GACGCCATAGTCCACTTGGCCGCCATCGTGGGGTTCCCTGCCTGCGCAGC
TAATCCAGAAAAGGCCATCAAAATCAACAAGGAGGGCACAGAAAACATTG
TCCGTCTGATGAAGAAAGGTCAGCGCATTGTCTACTCATCCACCGGGTCA
TGCTACGGAGCGGTTACCGGGATCTGCACCGAGGAGACGCCGATCAGCCC
ACTGACTCTCTACGGTGAGACCAAGGCCGATGGAGAGAAGGCTGTCATGG
CTGCCGGAGGCGTGGCGCTCCGCCTGGCGACTGTCTTCGGAGCTTCACCG
AGGCTCCGTCTCGACTTGCTCGTCAACGACCTCACCTACAAGGCACTCAG
CGGCCACCACTTCGCCTTGTATCAAGCCTCCTTTCGCCGCACCTTCTTAC
ACATCAAAGACGCGGCCATGGCCTTTGCGTTCTCTCTTAGGAACTACGAG
AGGATGTCAGGGCAAGCTTATAACGTAGGGTCTGAAACCATGAACTTGAC
AAAGGCTGAGCTAGCCAAAAAGATCCAGGAATTCATTCCTGAATGTGTGA
TCACTTTGTCAGATGAGGGTGAGGATAAGGATAAGAGGGATTATGAAGTG
TCCTATGCCAAGCTCCGTTCGCTGGGGTACAACACAACCCTCACTGTAGA
TGATGGAATCCGTGAGCTTGTGAAAGTCATGCCTTTTCTGTCAGATAGGG
AACTCCGCACATGTAGCAATGTTTAAATGGTTCTGTCTACTAGTATTACG
TGTACATGTATACTAAAATATGGTATATTTCATATCTTCAGCTTTACAGA
TATCACCCCAGACAATGGCCAGCACGTGTTGGTGACAGGCGGGGCAGGGT
ACGTCGGTTCAACCCTCGTTCCAATCCTGCTACAGGAGGGCTATCTTGTC
ACCATCTACGACATCTTCAACTTCGGGGTGTTCCCACTTCTACCAGTGGC
CGGACACCCCAGGTTGAGGCTCAAGGAGGGCAGCATCACGGATGTCGTGA
AACTGGCGGAGGCCATGGCTGATGTGGACGCCATAGTCCACTTGGCCGCC
ATCGTGGGGTTCCCTGCCTGCGCAGCTAATCCAGAAAAGGCCATCAAAAT
CAACAAGGAGGGCACAGAAAACATTGTCCGTCTGATGAAGAAAGGTCAGC
GCATTGTCTACTCATCCACCGGGTCATGCTACGGAGCGGTTACCGGGATC
TGCACCGAGGAGACGCCGATCAGCCCACTGACTCTCTACGGTGAGACCAA
GGCCGATGGAGAGAAGGCTGTCATGGCTGCCGGAGGCGTGGCGCTCCGCC
TGGCGACTGTCTTCGGAGCTTCACCGAGGCTCCGTCTCGACTTGCTCGTC
AACGACCTCACCTACAAGGCACTCAGCGGCCACCACTTCGCCTTGTATCA
AGCCTCCTTTCGCCGCACCTTCTTACACATCAAAGACGCGGCCATGGCCT
TTGCGTTCTCTCTTAGGAACTACGAGAGGATGTCAGGGCAAGCTTATAAC
GTAGGGTCTGAAACCATGAACTTGACAAAGGCTGAGCTAGCCAAAAAGAT
CCAGGAATTCATTCCTGAATGTGTGATCACTTTGTCAGATGAGGGTGAGG
ATAAGGATAAGAGGGATTATGAAGTGTCCTATGCCAAGCTCCGTTCGCTG
GGGTACAACACAACCCTCACTGTAGATGATGGAATCCGTGAGCTTGTGAA
AGTCATGCCTTTTCTGTCAGATAGGGAACTCCGCACATGTAGCAATGTTT
AA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000017 | genome | Sc0000017:1462366..1468075 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95282_evm2 |
| Biotype | protein_coding |
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