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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95279_evm0 >transcript:BL95279_evm0-protein ID=transcript:BL95279_evm0-protein|Name=transcript:BL95279_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=150bp
MFTRPGIISAQGKWVATKKGCYKGTFKSVISGADITNPGCSEYCWEEYKK
PYSATTGQDCGCRSEDEFKNLDPADESKCTTSCGGDATQKCGGDGFMSVW
VKGGGKKRGMAEKLEEVNGRLRELIAKREMAEEMEEMEEQLRELEAKLSR Run BLAST on NCBI mRNA from alignment at Sc0000017:274573..278878+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95279_evm0 ID=transcript:BL95279_evm0|Name=transcript:BL95279_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4306bp|location=Sequence derived from alignment at Sc0000017:274573..278878+ (Branchiostoma lanceolatum)
ATGTTTACTCGACCAGGTTTGGCTGTACACATTGAAGAGGCAAAGTTTCA
CATGGAGCCTAGACTGTTGCCAGGGCCTACACAGGCTAGCTCCTCGGCTG
TAGGGCCAACATGCTCCCGAGGAAACTCTCACCCAGCCACCCGAGGAAAA
CCCTTAGCTTCTTGAGCTGTAATCAGACAAAAACCTGTCGGATGGGTCCA
GTTGGGAGAGCCGAGTGGCTTGCATGTATAGGGTAAGCACATTTACAGTT
TTGGTAGAGACTGGTGACCAGGTGAAGTAAATTTGTGCAGGGGCCGAGTC
GCAGACACCAATGGCTAATATCTTAAGCTTGGTCACCAGCCGCCACCGGG
GTTTCAGGCGAGCGTCCTCGGCCCATCCTGGGAACTACAGCCGCCCGGGC
AACCAGTCCGCTCCGGTGATTNGCCCGGGCAATCAGTCCGCTCCGGTGAT
TTTGCCGGGTTTGCAAACAGTTACGTCTCTGGTTAGCCCGGTAATGTTTG
GGACACATTTCCAGTCCGGGGTCTGACCGGGCAGTCTTTGGGAACGAAAA
GAATTATGTAAAAGACAACAAGAACACAAAACTTACCAAAAAATATATAA
GAGCATATCTTGTATCTGTTGACAAACACTTTTTTATTTTTCGTTTCCGC
AAACAGCCCGACCGAGCCCCAGATGTTCATACATATAAGGCAACAGTTTA
GGACCTTTTTGTGTTAACCGACAAACATGTTTCTGTGCACCGGACAGAGA
GTGCTGCGTACTACATTGCGGAATGTAGTGCCGATCGGTGTAGGCGTTTC
CTTAAGACAACGCAAAACAACTATATCAATATTCATGAGTTTGTAATCTT
TCGGATCAGCAATTTTACGTTAACCATTTCTGCTACTATCGGTGGTTGTC
TGTAGCTCCCTTCAGGGCATTTAACTCTTAACCAATCACGTGGCGAGAAC
GGCGTCAGTTGCACCTTACGGAGGACACGCCCACATTTGAATGTGCGGCT
GCATTGTGGGAATGCTACAGTAGCAGTTGGGGCTCCTCTCTGTTCGGGTT
TGTCTTTCTTGCCGAGTTCGTTTAACTTTCATTGTCCGAACTGACAGGCA
AGATTGATGGAAATACCTTTATGGGTCTACCTCCAGGTCGAGTTGAGCAA
AGCTTAGAAAGACGACCGAATTCATTGATTATTGGAATAGGTTCTTGCTG
AGGTTAATCTTAGGAACGTTTTTGATATGCAGTCAAACCTGTCCTCAGCA
ATCACTCAAGGGACCGAAGAAAAAATGAGCTGAGGACAGGTGTTTGCACA
CGGCAGGGCAGGTTTAACTATGTACATGTTGTAAAGATGGACGGGGCTGG
TTTAATGTGGTTGCCTGCGCCAGGTGTTTGCTCGACCAGGTTTGACTGTA
CACAGTATAGAGGCAAAGTTTCACATGAAATTAGGCCGTTTCCAGGGCCA
GCATAGGCCAGCTCCTCGGCTATAATGCGAGCATGCCCCCAAGGAAACTC
TTACCCAGCCACCCGAGGAAGACCCTTAGCCTCTAGGGCTCTAATTATCT
CAATCATACAAAAACCAGTTGGGTGGGTTCAGTTGGCAAGGCAATATAAT
AAGCTGTTGCCATCTGTCCCAACTCACCCTCATCTGAGATGACTCAGTTT
TTTTCCCTTTTAAAATTTTACTATAAGATAAACCCCCATGCACAGCCTTG
AGGCCCAGAAAGGATAGTCTGACAGGGTAGCCTGGCCTGGTAGGCTAGCC
TGCCTTTTCCGGGGACCACGGTAGCATCGGGGAAGCCCAGGGAAACACGC
AGATGCTGTATCAAGACATAAAAATGACATTTTTTGTCTTTGTTACAGGG
ATCATCTCGGCTGATTGGGCGGCGACAAATATGGGCTGTTTTAAGACATA
AAAATGACCGTTTTTTGTCTTTGTTACAGGGATCATCTCGGCTGATTGGG
CGGCGACAAATATGGGCTGTTTTAAGACATAAAAATGACCGTTTTTTGTC
TTTGTTACAGGGATCATCTCGGCGCAGGGTAAATGGGTCGCCACCAAGAA
AGGCTGCTACAAGGGGACTTTCAAGTCTGTGATAAGCGGCGCGGACATAA
CCAACCCCGGATGCTCGGAATACTGCTGGGAGGAGTACAAAAAGCCGTAT
TCAGGTAGGATTTTATTAAGTGCCATCAAAAGGACCACTTTCGTTACATA
CTTAGTGAAAGAAGAGCAACAAGTGTTTGTTTCGTACCAATTGTTTGTTT
TAGAATTTTCTACCTAAGTTTAAAGCAAACATCGTCGGGATGGGTTAAAT
CAACAGTTTCAGGGGATCATGAATGATTTTGAAACAAATTCTGGAAGTGG
ACCCTGCTTTTTAAGTCCTTATCGTGCAGACGTGATTGAAGCTATTTGCT
TCTGTTATGCCTGTGTCCACCGGGAGTCTTTGCGAAAAATCTCTTGTTGT
CCCATTTGTCACAATTGGTCAAAGGTTGCTGTTGGAGGTCGATGTCGCCC
TCCGTCCCTCGAAAGACATTTCTTGTTGCCCTGTATGTCACAAGGCACGA
CAATCGGGATCTTCCCCTAACTTTCCCACAATAGCAACATACGAGACTAA
TACTGTAAATGCAGAAATGTTCGCGGTGGTTTTATTTTTGCGGTTTTGGC
GGGACCGGTTCACCGCGACCTTCAAACCACCGCGAACATTTTCGTCCAAT
ACAGCAGCAGTATGGGACTATAGCACTGCCACGGACTTTAAACCACCGCG
AACACTCTGCTTTCGCCTTAGCGCGAAGTAAAAACCACACGAACTTAAAT
GCATTTATTCTTAAACGAGTTTAAACTGTAATTTCCAACACAAAAAATTG
GACTTACCCGAATTTTCGACCGTACGACATCGGTCTTTGTCAAGGAATGA
TCCATCCACCGCTGGGGTGACGTCACGTTATGCAGATAGCACACGTGACT
CCGTGAGTAGTGGATCGTAAGTATTGGAAAGTCTGTAGCGCCCGCCGTCT
CTGTTGAGGGATGGTCGTAGGGCCCTGATGTAAATGGCTTCCTTGATGCC
TCTTGCAACGAAGTCCGACTCAGTGTCCAGAATTTTAACTTTATCCAGTG
AAACTGAATGTCCAGGGGATTCTATGTGTAAGTGCTGTGAGACTTCTGAG
GAGATGGTGCTTGGGCGTTTGTGCTCGTTTAAGAATGACTTCTACCAACA
CAGATGAACTTTCAAGCTTAAATGCATTTACATATCTTAATGTACCTTTT
CTTGTTCCCAAACAGCAACCACAGGGCAAGACTGCGGCTGCAGGAGTGAA
GACGAATTTAAGAATCTGGATCCGGCTGACGAGTCCAAGTGTACCACCAG
CTGCGGGGGTGACGCCACACAGAAGTGTGGGGGCGACGGGTTTATGAGCG
TCTGGGTCAAAGGAGGTGAGGCAAATCAAAAATGCTGTTGAAAGCTTATG
TTGACTTAACCTTTTAACTTTTAACTGATATATCATCATCATCATCTACT
GGTCTCTGCATCCGCAGTCGTTGAAACGTCCTGCAGCTGCATTCAGTCTT
TCTTCATCTTCTTCCACGTTTCCTTGCATCCTGCGAGCTCCCTTAGCTCT
CGGAGTTTCTTTCCTGTTGTGGGAGGGCCTCGCCCTCTGTGCTGCAGGTC
TCCCTTCAGCATGCTGAGTAGATTGACACAGTGTCTTCCTCTGCGTGCCT
TGTATCTGCTGGACCTCAATGTTGCGAATTGATATATGCCACCCGTTAAT
ATGCCATAATGACTGTTACATCGTGTTATCACGATGATCTGCTCATCATC
ATAGCTTGTCGCAATGTATCTCAATCCAGTTCAGTGCATGCGACGCGACT
AGGATGAAATACATAATTACAGAAGTCTCCATTTGTTATAACGTAAAGAT
AGAGAGACAGACACAAAAGCTACACAGACAGACAGACAGACAGACAGACA
GACAGACAGACCGGACAAGGGTTCTTACTTTGAAATAACTGACCCACCCT
TTCGTTCCGAATGATTGGTCGCCTTCTTGGACTCATGGTCCAAACAAAAT
GGCCGAACACTTATATATGACGTCATGAATCGGTTCGTATTGCAGAGCTG
TGACGTCATGTACGATCCCTTACGTATGACGTCATGAATCTCATTCCTAT
CCTATCCGTACAGGTGGGAAAAAGCGCGGGATGGCCGAGAAGCTGGAGGA
GGTCAACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGGCGGAGG
AGATGGAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAGTTATCT
CGTTAA Coding sequence (CDS) from alignment at Sc0000017:274573..278878+ >transcript:BL95279_evm0 ID=transcript:BL95279_evm0|Name=transcript:BL95279_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1812bp|location=Sequence derived from alignment at Sc0000017:274573..278878+ (Branchiostoma lanceolatum)
ATGTTTACTCGACCAGGGATCATCTCGGCGCAGGGTAAATGGGTCGCCAC
CAAGAAAGGCTGCTACAAGGGGACTTTCAAGTCTGTGATAAGCGGCGCGG
ACATAACCAACCCCGGATGCTCGGAATACTGCTGGGAGGAGTACAAAAAG
CCGTATTCAGCAACCACAGGGCAAGACTGCGGCTGCAGGAGTGAAGACGA
ATTTAAGAATCTGGATCCGGCTGACGAGTCCAAGTGTACCACCAGCTGCG
GGGGTGACGCCACACAGAAGTGTGGGGGCGACGGGTTTATGAGCGTCTGG
GTCAAAGGAGGTGGGAAAAAGCGCGGGATGGCCGAGAAGCTGGAGGAGGT
CAACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGGCGGAGGAGA
TGGAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAGTTATCTCGT
TAAATGTTTACTCGACCAGGGATCATCTCGGCGCAGGGTAAATGGGTCGC
CACCAAGAAAGGCTGCTACAAGGGGACTTTCAAGTCTGTGATAAGCGGCG
CGGACATAACCAACCCCGGATGCTCGGAATACTGCTGGGAGGAGTACAAA
AAGCCGTATTCAGCAACCACAGGGCAAGACTGCGGCTGCAGGAGTGAAGA
CGAATTTAAGAATCTGGATCCGGCTGACGAGTCCAAGTGTACCACCAGCT
GCGGGGGTGACGCCACACAGAAGTGTGGGGGCGACGGGTTTATGAGCGTC
TGGGTCAAAGGAGGTGGGAAAAAGCGCGGGATGGCCGAGAAGCTGGAGGA
GGTCAACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGGCGGAGG
AGATGGAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAGTTATCT
CGTTAAATGTTTACTCGACCAGGGATCATCTCGGCGCAGGGTAAATGGGT
CGCCACCAAGAAAGGCTGCTACAAGGGGACTTTCAAGTCTGTGATAAGCG
GCGCGGACATAACCAACCCCGGATGCTCGGAATACTGCTGGGAGGAGTAC
AAAAAGCCGTATTCAGCAACCACAGGGCAAGACTGCGGCTGCAGGAGTGA
AGACGAATTTAAGAATCTGGATCCGGCTGACGAGTCCAAGTGTACCACCA
GCTGCGGGGGTGACGCCACACAGAAGTGTGGGGGCGACGGGTTTATGAGC
GTCTGGGTCAAAGGAGGTGGGAAAAAGCGCGGGATGGCCGAGAAGCTGGA
GGAGGTCAACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGGCGG
AGGAGATGGAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAGTTA
TCTCGTTAAATGTTTACTCGACCAGGGATCATCTCGGCGCAGGGTAAATG
GGTCGCCACCAAGAAAGGCTGCTACAAGGGGACTTTCAAGTCTGTGATAA
GCGGCGCGGACATAACCAACCCCGGATGCTCGGAATACTGCTGGGAGGAG
TACAAAAAGCCGTATTCAGCAACCACAGGGCAAGACTGCGGCTGCAGGAG
TGAAGACGAATTTAAGAATCTGGATCCGGCTGACGAGTCCAAGTGTACCA
CCAGCTGCGGGGGTGACGCCACACAGAAGTGTGGGGGCGACGGGTTTATG
AGCGTCTGGGTCAAAGGAGGTGGGAAAAAGCGCGGGATGGCCGAGAAGCT
GGAGGAGGTCAACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGG
CGGAGGAGATGGAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAG
TTATCTCGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000017 | genome | Sc0000017:274573..278878 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95279_evm0 |
| Biotype | protein_coding |
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