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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95216_evm0 >transcript:BL95216_evm0-protein ID=transcript:BL95216_evm0-protein|Name=transcript:BL95216_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=500bp
MAGVGLFPFVTMDLQTPLVLLLLFLVAVLLVYRRGRRPNLPPGPRGLPIV
GNLFSMRPSKLLSNMAAWRQQYGDVYSVRALNRVIVVLYGHKAIHDALVK
QPEIFSDRPPLRLHKRDPGLIMAPYGEGWAERRRFALSALRQFGMGRRSA
EGRIQEEATALCTAIRSLDGAPTDISHLLGNAVSNIICSMSFGNRFEYDD
EEFKRLSHAFSCLVGPQNRTLLALIRQIVMPYLRKLPMMANWRVGGVKMS
DYIIDFIMKSAEEHKTTFDKSDIRDIIDVFLSEGSEKGNGVNEEALGTII
RDLFIAGSETTATTLKWGLLYTALNPDVQTKVQEEINREFGTDTPPWSER
GRLTYTEATIMEIQRVRPIVPLNLFHGTTGATTLHGYDIPAGTYIIPSLW
SAMMDPEVTPEPEKFRPERFLDDEGRVVKPEWFLPFSTGRRRCLGEQLAK
MELFLFYTSLLQHFTFNLPDGAPAPPMDGSLGFVLAPTPYDVCAVPRHNP Run BLAST on NCBI mRNA from alignment at Sc0000012:340634..343431- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95216_evm0 ID=transcript:BL95216_evm0|Name=transcript:BL95216_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2798bp|location=Sequence derived from alignment at Sc0000012:340634..343431- (Branchiostoma lanceolatum)
ATGGCGGGTGTAGGTTTGTTTCCCTTCGTGACAATGGATCTGCAGACACC
CTTGGTACTCCTCCTGTTGTTCCTGGTGGCCGTCTTGCTCGTGTATCGGA
GGGGACGTCGGCCGAACCTTCCTCCCGGACCCCGGGGCCTTCCTATTGTG
GGGAATCTGTTCAGCATGCGTCCCAGCAAACTGCTGTCCAACATGGCGGC
CTGGCGTCAGCAGTACGGAGATGTGTACAGTGTGAGGGCCTTGAATCGGG
TCATTGTTGTGCTGTACGGGTGAGTAAAAAGGTCATGTGTTCTTGAACTA
CGTATACACTAGCCTAGTTTAACGCAGTGCCATTGCGGTATCTCTCTATC
TCTCTCATAGTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCAGGCTCTCTCTCTCTGTGAACGTG
TGTGTGAACTTGTGTGAACGTGTACGGTGTGCATTTCATAAGTAAGAATT
GATACCTTAGTATCCGCATAAAGCTCATGTCGACGGAAGACTAATATTGT
ATGTTTGATTCCCATACCAGGTGTGTTCCTGGCGCATTGCTATGCTGCTC
CCGCATTTTGATATACTCTGTGATCCCCGTGAGACATGTGAAGCACGCAG
CCTCACATGACTGTTGACTTAGGGTCATATGTTAGTTGTCACAAAGATCA
AAGTAATGGCAATATAGTATGGTGGCTTTCCAATCATGCATGATTCCAGA
GCGATCTAGAATAACACGCCGCTGTGTGTGTCTGAGTTGTGTGTGTGCGT
GCGTGCGTGTGTATGTATGTGTGTGTGCGTGCGCGTGTGTGTGTGTGTGC
GCGTGCGTGTGTATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGCAGTGACTGACTGGCGATGTATACTATTTTCTT
TGATCGGTTCCATCAGTAGTAGGTGATAAATCCGCATCTCCTGCTTGGTG
GACCAACAAAAAACATCTGTTGCCTTGTCCTTTTATGCAGACACAAGGCG
ATCCACGATGCTCTTGTGAAACAACCGGAGATATTCTCAGACCGACCGCC
ATTGAGGCTCCACAAACGCGACCCTGGTACGACTATACGCTATATGTTTT
GCAATCCATACACGACTGTGACATGAACATATCAGGAAGGTCTTGGCATA
GTTAGATCAATTTTCTCAAGGACAAAAGCCCAACCATGTTGTTTGATTAC
CTGGACGAGATTAGCATAGACAATAGAAATCATTTCCTTTATATTCTAAA
AGTGCTACCAGACTTCATTTGTCCTACCCAGTTGCTGTCATGTCATACAA
TACAGGTACAACGTTGTGCTCCTTTTTTTAACAGCATAAGACATCTGTCA
ACTACTGCGGTGCGCATTGATTATAGCACCGAGATATTGGCAAACATTCT
TCATAAGCTATATATGTGTAAAAAAGAGGGTGAGATTGGAAAAAAGTTTA
TCTGTTTTTTAAACACAGGGTTGATCATGGCTCCTTACGGGGAAGGTTGG
GCCGAGAGGCGCCGTTTCGCTCTGTCAGCCCTCCGACAGTTCGGCATGGG
AAGGCGCAGTGCGGAGGGAAGGATACAGGAAGAGGCGACGGCTCTGTGCA
CTGCCATAAGGTCTCTCGATGGAGCACCGACGGACATATCCCACCTTCTA
GGAAACGCGGTCTCAAACATCATCTGCTCCATGTCGTTCGGCAACCGCTT
CGAGTACGACGACGAAGAGTTTAAGCGCCTTTCTCACGCGTTTTCTTGCC
TTGTCGGGCCGCAAAACAGAACCTTACTTGCCCTGATTCGACAAATTGTC
ATGCCATACCTGAGGAAGCTGCCCATGATGGCCAACTGGCGTGTTGGCGG
TGTGAAAATGAGCGATTACATCATAGACTTTATCATGAAGAGTGCAGAAG
AACACAAGACAACTTTCGACAAGTCTGACATCAGAGACATCATCGATGTC
TTCTTAAGCGAAGGGAGTGAGAAGGGCAATGGCGTCAATGAAGAGGCGCT
TGGTACTATCATCAGAGATCTCTTCATTGCCGGTTCCGAAACAACGGCGA
CGACTTTAAAGTGGGGTCTGCTCTACACGGCCCTAAACCCAGACGTTCAG
ACCAAGGTACAAGAAGAAATCAACCGCGAGTTTGGGACTGATACCCCGCC
GTGGTCGGAGCGCGGAAGACTGACATACACCGAGGCGACCATCATGGAAA
TCCAGCGGGTACGCCCGATTGTGCCTCTTAATCTGTTCCACGGAACCACC
GGCGCCACCACGCTGCACGGGTACGACATCCCAGCTGGCACGTACATCAT
ACCGAGCCTGTGGTCCGCCATGATGGACCCGGAAGTGACGCCGGAACCCG
AGAAGTTCCGACCAGAAAGGTTCTTGGACGACGAAGGAAGGGTGGTCAAG
CCGGAATGGTTTTTACCTTTTTCCACAGGTACATGTTTAAGTTATTATGT
TTATTTTCTTCAGATTTCCCTAACTTATCAACGTTAGGGCCGATTGGGGA
AATAGATTTCTTCACTATTAAATGTGTTCTCGTTCCCTATCTATTCCCGT
ATCGGTGTAGGTCGGCGACGGTGTTTGGGAGAACAGCTTGCCAAAATGGA
ACTGTTCCTTTTCTACACCAGCCTACTGCAGCACTTCACCTTCAATCTAC
CAGATGGCGCCCCTGCACCGCCTATGGACGGCAGTCTTGGCTTTGTCTTG
GCTCCAACACCGTATGACGTATGCGCCGTTCCCAGGCACAACCCATAA Coding sequence (CDS) from alignment at Sc0000012:340634..343431- >transcript:BL95216_evm0 ID=transcript:BL95216_evm0|Name=transcript:BL95216_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=6012bp|location=Sequence derived from alignment at Sc0000012:340634..343431- (Branchiostoma lanceolatum)
ATGGCGGGTGTAGGTTTGTTTCCCTTCGTGACAATGGATCTGCAGACACC
CTTGGTACTCCTCCTGTTGTTCCTGGTGGCCGTCTTGCTCGTGTATCGGA
GGGGACGTCGGCCGAACCTTCCTCCCGGACCCCGGGGCCTTCCTATTGTG
GGGAATCTGTTCAGCATGCGTCCCAGCAAACTGCTGTCCAACATGGCGGC
CTGGCGTCAGCAGTACGGAGATGTGTACAGTGTGAGGGCCTTGAATCGGG
TCATTGTTGTGCTGTACGGACACAAGGCGATCCACGATGCTCTTGTGAAA
CAACCGGAGATATTCTCAGACCGACCGCCATTGAGGCTCCACAAACGCGA
CCCTGGGTTGATCATGGCTCCTTACGGGGAAGGTTGGGCCGAGAGGCGCC
GTTTCGCTCTGTCAGCCCTCCGACAGTTCGGCATGGGAAGGCGCAGTGCG
GAGGGAAGGATACAGGAAGAGGCGACGGCTCTGTGCACTGCCATAAGGTC
TCTCGATGGAGCACCGACGGACATATCCCACCTTCTAGGAAACGCGGTCT
CAAACATCATCTGCTCCATGTCGTTCGGCAACCGCTTCGAGTACGACGAC
GAAGAGTTTAAGCGCCTTTCTCACGCGTTTTCTTGCCTTGTCGGGCCGCA
AAACAGAACCTTACTTGCCCTGATTCGACAAATTGTCATGCCATACCTGA
GGAAGCTGCCCATGATGGCCAACTGGCGTGTTGGCGGTGTGAAAATGAGC
GATTACATCATAGACTTTATCATGAAGAGTGCAGAAGAACACAAGACAAC
TTTCGACAAGTCTGACATCAGAGACATCATCGATGTCTTCTTAAGCGAAG
GGAGTGAGAAGGGCAATGGCGTCAATGAAGAGGCGCTTGGTACTATCATC
AGAGATCTCTTCATTGCCGGTTCCGAAACAACGGCGACGACTTTAAAGTG
GGGTCTGCTCTACACGGCCCTAAACCCAGACGTTCAGACCAAGGTACAAG
AAGAAATCAACCGCGAGTTTGGGACTGATACCCCGCCGTGGTCGGAGCGC
GGAAGACTGACATACACCGAGGCGACCATCATGGAAATCCAGCGGGTACG
CCCGATTGTGCCTCTTAATCTGTTCCACGGAACCACCGGCGCCACCACGC
TGCACGGGTACGACATCCCAGCTGGCACGTACATCATACCGAGCCTGTGG
TCCGCCATGATGGACCCGGAAGTGACGCCGGAACCCGAGAAGTTCCGACC
AGAAAGGTTCTTGGACGACGAAGGAAGGGTGGTCAAGCCGGAATGGTTTT
TACCTTTTTCCACAGGTCGGCGACGGTGTTTGGGAGAACAGCTTGCCAAA
ATGGAACTGTTCCTTTTCTACACCAGCCTACTGCAGCACTTCACCTTCAA
TCTACCAGATGGCGCCCCTGCACCGCCTATGGACGGCAGTCTTGGCTTTG
TCTTGGCTCCAACACCGTATGACGTATGCGCCGTTCCCAGGCACAACCCA
TAAATGGCGGGTGTAGGTTTGTTTCCCTTCGTGACAATGGATCTGCAGAC
ACCCTTGGTACTCCTCCTGTTGTTCCTGGTGGCCGTCTTGCTCGTGTATC
GGAGGGGACGTCGGCCGAACCTTCCTCCCGGACCCCGGGGCCTTCCTATT
GTGGGGAATCTGTTCAGCATGCGTCCCAGCAAACTGCTGTCCAACATGGC
GGCCTGGCGTCAGCAGTACGGAGATGTGTACAGTGTGAGGGCCTTGAATC
GGGTCATTGTTGTGCTGTACGGACACAAGGCGATCCACGATGCTCTTGTG
AAACAACCGGAGATATTCTCAGACCGACCGCCATTGAGGCTCCACAAACG
CGACCCTGGGTTGATCATGGCTCCTTACGGGGAAGGTTGGGCCGAGAGGC
GCCGTTTCGCTCTGTCAGCCCTCCGACAGTTCGGCATGGGAAGGCGCAGT
GCGGAGGGAAGGATACAGGAAGAGGCGACGGCTCTGTGCACTGCCATAAG
GTCTCTCGATGGAGCACCGACGGACATATCCCACCTTCTAGGAAACGCGG
TCTCAAACATCATCTGCTCCATGTCGTTCGGCAACCGCTTCGAGTACGAC
GACGAAGAGTTTAAGCGCCTTTCTCACGCGTTTTCTTGCCTTGTCGGGCC
GCAAAACAGAACCTTACTTGCCCTGATTCGACAAATTGTCATGCCATACC
TGAGGAAGCTGCCCATGATGGCCAACTGGCGTGTTGGCGGTGTGAAAATG
AGCGATTACATCATAGACTTTATCATGAAGAGTGCAGAAGAACACAAGAC
AACTTTCGACAAGTCTGACATCAGAGACATCATCGATGTCTTCTTAAGCG
AAGGGAGTGAGAAGGGCAATGGCGTCAATGAAGAGGCGCTTGGTACTATC
ATCAGAGATCTCTTCATTGCCGGTTCCGAAACAACGGCGACGACTTTAAA
GTGGGGTCTGCTCTACACGGCCCTAAACCCAGACGTTCAGACCAAGGTAC
AAGAAGAAATCAACCGCGAGTTTGGGACTGATACCCCGCCGTGGTCGGAG
CGCGGAAGACTGACATACACCGAGGCGACCATCATGGAAATCCAGCGGGT
ACGCCCGATTGTGCCTCTTAATCTGTTCCACGGAACCACCGGCGCCACCA
CGCTGCACGGGTACGACATCCCAGCTGGCACGTACATCATACCGAGCCTG
TGGTCCGCCATGATGGACCCGGAAGTGACGCCGGAACCCGAGAAGTTCCG
ACCAGAAAGGTTCTTGGACGACGAAGGAAGGGTGGTCAAGCCGGAATGGT
TTTTACCTTTTTCCACAGGTCGGCGACGGTGTTTGGGAGAACAGCTTGCC
AAAATGGAACTGTTCCTTTTCTACACCAGCCTACTGCAGCACTTCACCTT
CAATCTACCAGATGGCGCCCCTGCACCGCCTATGGACGGCAGTCTTGGCT
TTGTCTTGGCTCCAACACCGTATGACGTATGCGCCGTTCCCAGGCACAAC
CCATAAATGGCGGGTGTAGGTTTGTTTCCCTTCGTGACAATGGATCTGCA
GACACCCTTGGTACTCCTCCTGTTGTTCCTGGTGGCCGTCTTGCTCGTGT
ATCGGAGGGGACGTCGGCCGAACCTTCCTCCCGGACCCCGGGGCCTTCCT
ATTGTGGGGAATCTGTTCAGCATGCGTCCCAGCAAACTGCTGTCCAACAT
GGCGGCCTGGCGTCAGCAGTACGGAGATGTGTACAGTGTGAGGGCCTTGA
ATCGGGTCATTGTTGTGCTGTACGGACACAAGGCGATCCACGATGCTCTT
GTGAAACAACCGGAGATATTCTCAGACCGACCGCCATTGAGGCTCCACAA
ACGCGACCCTGGGTTGATCATGGCTCCTTACGGGGAAGGTTGGGCCGAGA
GGCGCCGTTTCGCTCTGTCAGCCCTCCGACAGTTCGGCATGGGAAGGCGC
AGTGCGGAGGGAAGGATACAGGAAGAGGCGACGGCTCTGTGCACTGCCAT
AAGGTCTCTCGATGGAGCACCGACGGACATATCCCACCTTCTAGGAAACG
CGGTCTCAAACATCATCTGCTCCATGTCGTTCGGCAACCGCTTCGAGTAC
GACGACGAAGAGTTTAAGCGCCTTTCTCACGCGTTTTCTTGCCTTGTCGG
GCCGCAAAACAGAACCTTACTTGCCCTGATTCGACAAATTGTCATGCCAT
ACCTGAGGAAGCTGCCCATGATGGCCAACTGGCGTGTTGGCGGTGTGAAA
ATGAGCGATTACATCATAGACTTTATCATGAAGAGTGCAGAAGAACACAA
GACAACTTTCGACAAGTCTGACATCAGAGACATCATCGATGTCTTCTTAA
GCGAAGGGAGTGAGAAGGGCAATGGCGTCAATGAAGAGGCGCTTGGTACT
ATCATCAGAGATCTCTTCATTGCCGGTTCCGAAACAACGGCGACGACTTT
AAAGTGGGGTCTGCTCTACACGGCCCTAAACCCAGACGTTCAGACCAAGG
TACAAGAAGAAATCAACCGCGAGTTTGGGACTGATACCCCGCCGTGGTCG
GAGCGCGGAAGACTGACATACACCGAGGCGACCATCATGGAAATCCAGCG
GGTACGCCCGATTGTGCCTCTTAATCTGTTCCACGGAACCACCGGCGCCA
CCACGCTGCACGGGTACGACATCCCAGCTGGCACGTACATCATACCGAGC
CTGTGGTCCGCCATGATGGACCCGGAAGTGACGCCGGAACCCGAGAAGTT
CCGACCAGAAAGGTTCTTGGACGACGAAGGAAGGGTGGTCAAGCCGGAAT
GGTTTTTACCTTTTTCCACAGGTCGGCGACGGTGTTTGGGAGAACAGCTT
GCCAAAATGGAACTGTTCCTTTTCTACACCAGCCTACTGCAGCACTTCAC
CTTCAATCTACCAGATGGCGCCCCTGCACCGCCTATGGACGGCAGTCTTG
GCTTTGTCTTGGCTCCAACACCGTATGACGTATGCGCCGTTCCCAGGCAC
AACCCATAAATGGCGGGTGTAGGTTTGTTTCCCTTCGTGACAATGGATCT
GCAGACACCCTTGGTACTCCTCCTGTTGTTCCTGGTGGCCGTCTTGCTCG
TGTATCGGAGGGGACGTCGGCCGAACCTTCCTCCCGGACCCCGGGGCCTT
CCTATTGTGGGGAATCTGTTCAGCATGCGTCCCAGCAAACTGCTGTCCAA
CATGGCGGCCTGGCGTCAGCAGTACGGAGATGTGTACAGTGTGAGGGCCT
TGAATCGGGTCATTGTTGTGCTGTACGGACACAAGGCGATCCACGATGCT
CTTGTGAAACAACCGGAGATATTCTCAGACCGACCGCCATTGAGGCTCCA
CAAACGCGACCCTGGGTTGATCATGGCTCCTTACGGGGAAGGTTGGGCCG
AGAGGCGCCGTTTCGCTCTGTCAGCCCTCCGACAGTTCGGCATGGGAAGG
CGCAGTGCGGAGGGAAGGATACAGGAAGAGGCGACGGCTCTGTGCACTGC
CATAAGGTCTCTCGATGGAGCACCGACGGACATATCCCACCTTCTAGGAA
ACGCGGTCTCAAACATCATCTGCTCCATGTCGTTCGGCAACCGCTTCGAG
TACGACGACGAAGAGTTTAAGCGCCTTTCTCACGCGTTTTCTTGCCTTGT
CGGGCCGCAAAACAGAACCTTACTTGCCCTGATTCGACAAATTGTCATGC
CATACCTGAGGAAGCTGCCCATGATGGCCAACTGGCGTGTTGGCGGTGTG
AAAATGAGCGATTACATCATAGACTTTATCATGAAGAGTGCAGAAGAACA
CAAGACAACTTTCGACAAGTCTGACATCAGAGACATCATCGATGTCTTCT
TAAGCGAAGGGAGTGAGAAGGGCAATGGCGTCAATGAAGAGGCGCTTGGT
ACTATCATCAGAGATCTCTTCATTGCCGGTTCCGAAACAACGGCGACGAC
TTTAAAGTGGGGTCTGCTCTACACGGCCCTAAACCCAGACGTTCAGACCA
AGGTACAAGAAGAAATCAACCGCGAGTTTGGGACTGATACCCCGCCGTGG
TCGGAGCGCGGAAGACTGACATACACCGAGGCGACCATCATGGAAATCCA
GCGGGTACGCCCGATTGTGCCTCTTAATCTGTTCCACGGAACCACCGGCG
CCACCACGCTGCACGGGTACGACATCCCAGCTGGCACGTACATCATACCG
AGCCTGTGGTCCGCCATGATGGACCCGGAAGTGACGCCGGAACCCGAGAA
GTTCCGACCAGAAAGGTTCTTGGACGACGAAGGAAGGGTGGTCAAGCCGG
AATGGTTTTTACCTTTTTCCACAGGTCGGCGACGGTGTTTGGGAGAACAG
CTTGCCAAAATGGAACTGTTCCTTTTCTACACCAGCCTACTGCAGCACTT
CACCTTCAATCTACCAGATGGCGCCCCTGCACCGCCTATGGACGGCAGTC
TTGGCTTTGTCTTGGCTCCAACACCGTATGACGTATGCGCCGTTCCCAGG
CACAACCCATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:340634..343431 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95216_evm0 |
| Biotype | protein_coding |
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