|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95198_evm0 >transcript:BL95198_evm0-protein ID=transcript:BL95198_evm0-protein|Name=transcript:BL95198_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=225bp
MITCGVIIVKPIHETNSLAFKGTTCTTIAANLTGEDIDCKCGKDCHSEYP
CLRMTVSYADHDEDGTTYSGVLFESDKRLMHDGHRDEDVQCVTAPCDRSR
RDNKDQVLEFQDTYNVGESYSCLYNPDNTKQVLLKRLFTWNDMFHSMLWS
TLGFVFFSALLVFSLIKCNSERAKMCTMPVASPGAQTAQPGHFLPPPYPG
GQTAYPQPPPYSVIDSKDEKGLTFN Run BLAST on NCBI mRNA from alignment at Sc0000010:852100..858807- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95198_evm0 ID=transcript:BL95198_evm0|Name=transcript:BL95198_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=6708bp|location=Sequence derived from alignment at Sc0000010:852100..858807- (Branchiostoma lanceolatum)
ATGATCACCTGTGGCGTCATCATCGTCAAGCCGATCCACGAGACAAACTC
TCTGGCGTTCAAGGGAACAACCTGCACCACAATCGCCGCTAACCTTACTG
GTAAGTGTCCTTCTACACATTTCCTACAATTGCTTAAGCTTCTCCATGAA
CTTGTACGTCGGCTTATGTGCTAGTAAAACTAGTAGGGCCTAGGGAAACA
CGGTAGGTTTGCGGGTACCTGACTGACCATAGCAAAAACCTTAGCCTTTG
GGGGAGGGGGGGGTTGGGAAGGGGGGGTGCTGTTTTATTCAATCGGTTCT
CTGAGTGATGACTCCTTGTATTTCACGATGTACGTTTGTTGTGTCATGTT
CTATTTGCTTTGTTGTTCATCTATGTTTTTTTTCATATGAGCCATGGGGC
TGAAATAATCTTTAAAATGGAAACAAAGAGCTGCATGATTCATAAACGTG
AAGGGAGCTTCTCTAAAATCTCTTTTAACTTCTTAAAACACACTCATAAG
CATCTTTATTTTTCCTCAGGTGAGGACATTGACTGTAAGTGCGGTAAGGA
CTGCCACTCGGAATACCCCTGTCTGCGCATGACTGTGTCGTATGCTGATC
ATGATGAGGACGGCACCACATACAGCGGTGTGCTGTTCGAAAGTGATAAA
AGGCTGATGCATGATGGACACAGAGACGAGGTAAGTATCTACTAACGTAA
TTCCACCAGGGTACTTGGTTCCGCCACCCTGCAAAGATATGTCCAAACAG
CTCTCCAACCGAACGGCCCCAAGGATAATGCACTCATGTACAAAACAAAA
TGTATATCAAAACCGTGAATGCCTGGGGTTGCAGCACTACTCAAACCCAC
TATTTTTCAAAGTGGCGGATTTATGTATACGTTACCCGGCGGATTAATGA
TAATCTTTATTGCATGTTCGTTCCCCAGAAGGATAAATGCACAGGAAGCC
ACAGGGGGCCATACATGGGGTAATTGAGAGAATAGAATAATAAGAATAAC
GTTAACATTAACGTCTTATACAATACTAAGCACTATACTAGATATCCTAC
TGTATATCTAGGCTCTAGTGTTCTGTGAAAACGAAGAATTCAAGCCTACA
CCGACTTGTTTCGTCTTGTGTGTGGCTTTCTCAAGGATCACAGATCGAAT
GAGCGCAAGCACAGTGTGTTCTGACCTTTATAGGCCAGGTGCATAGTGCG
CAAGGTGGTTTAACCAATCAAAGTTCAGTTATAGTGCACTCTGCTCTTCT
ATTTCTAAGTGCGCTCGACTACATGACCTCACTTGGCATTACCTGACATT
ACCTGATCTTGGTCTGCAGGATGTCCAGTGTGTGACGGCGCCATGTGACC
GCAGCAGGAGAGACAACAAGGACCAAGTCTTGGAATTTCAAGACACCTAC
AATGTTGGGGAGTCCTACTCGTGTCTGTACAATCCTGACAACACCAAGGT
TAGTGTTTACGTTGTAGATGTATTAATATATCTATAAAAATCAACATAGC
AGCACACGGTAGACGATGTAGACAATACTGAATTGTGTTGACCCAATAAC
GTTTTATCGAATCCCTTTTTTATGTGCGAAAAGTGTTTTTTTATTATATT
GTTACGTCTGATAGCTTTATATACATGTAATTTATTCTATGTGGCTCCCC
AAGAAATAAAGGATGGAAAGAACGAATAAATAGATACATACTTCCCCTTT
TTAATACAATGCTAAACTTTCTTCCAACGCTAAGGCATTCATGGAAGAAA
GTTTAGCATTGTATTATGATTACTGCCAACACAGATGAGCTTCCATGATC
CTTTTTTTGTTCGTTTCAGGAGTTCCATTTGAGTGTATGAGACCGTATAC
GGATGGCAAGCCGAAAACTAAGTTGCGCTGTTTCTTTTTTTCTTCTTCTT
GCAGCAAGTCCTGCTGAAGAGGCTGTTCACGTGGAACGACATGTTCCACT
CCATGCTGTGGAGCACACTCGGGTTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGTGCTG
TTATATTCGATCTGTTCTCTGAGTGATGACTTCTTGTATTTCACGATGTA
CGTTTGTTGTGTCATGTTCTATTTGCTTTGTTGTTCATCTATGTTTTTTC
ATATGAGCCATGGGGCTGAAATAATCTTTAAAATGGAAACAAAGAGCTGC
ATGATTCATAAACGTGAAGGGAGCTTCTCTAAAATCTCTTTTAACTTCTT
AAAACACACTCATAAGCATCTTTATTTTTCCTCAGGTGAGGACATTGACT
GTAAGTGCGGTAAGGACTGCCACTCGGAATACCCCTGTCTGCGCATGACT
GTGTCGTATGCTGATCATGATGAGGACGGCACCACATACAGCGGTGTGCT
GTTCGAAAGTGATAAAAGGCTGATGCATGATGGACACAGAGACGAGGTAA
GTATCTACTAACGTAATTCCACCAGGGTACTTGGTTCCGCCACCCTGCAA
AGATATGTCCAAACAGCTCTCCAACCGAACGGCCCCAAGGATAATGCACT
CATGTACAAAACAAAATGTATATCAAAACCGTGAATGCCTGGGGTTGCAG
CACTACTCAAACCCACTATTTTTCAAAGTGGCGGATTTATGTATACGTTA
CCCGGCGGATTAATGATAATCTTTATTGCATGTTCGTTCCCCAGAAGGAT
AAATGCACAGGAAGCCACAGGGGGCCATACATGGGGTAATTGAGAGAATA
GAATAATAAGAATAACGTTAACATTAACGTCTTATACAATACTAAGCACT
ATACTAGATATCCTACTGTATATCTAGGCTCTAGTGTTCTGTGAAAACGA
AGAATTCAAGCCTACACCGACTTGTTTCGTCTTGTGTGTGGCTTTCTCAA
GGATCACAGATCGAATGAGCGCAAGCACAGTGTGTTCTGACCTTTATAGG
CCAGGTGCATAGTGCGCAAGGTGGTTTAACCAATCAAAGTTCAGTTATAG
TGCACTCTGCTCTTCTATTTCTAAGTGCGCTCGACTACATGACCTCACTT
GGCATTACCTGACATTACCTGATCTTGGTCTGCAGGATGTCCAGTGTGTG
ACGGCGCCATGTGACCGCAGCAGGAGAGACAACAAGGACCAAGTCTTGGA
ATTTCAAGACACCTACAATGTTGGGGAGTCCTACTCGTGTCTGTACAATC
CTGACAACACCAAGGTTAGTGTTTACGTTGTAGATGTATTAATATATCTA
TAAAAATCAACATAGCAGCACACGGTAGACGATGTAGACAATACTGAATT
GTGTTGACCCAATAACGTTTTATCGAATCCCTTTTTTATGTGCGAAAAGT
GTTTTTTTATTATATTGTTACGTCTGATAGCTTTATATACATGTAATTTA
TTCTATGTGGCTCCCCAAGAAATAAAGGATGGAAAGAACGAATAAATAGA
TACATACTTCCCCTTTTTAATACAATGCTAAACTTTCTTCCAACGCTAAG
GCATTCATGGAAGAAAGTTTAGCATTGTATTATGATTACTGCCAACACAG
ATGAGCTTCCATGATCCTTTTTTTGTTCGTTTCAGGAGTTCCATTTGAGT
GTATGAGACCGTATACGGATGGCAAGCCGAAAACTAAGTTGCGCTGTTTC
TTTTTTTCTTCTTCTTGCAGCAAGTCCTGCTGAAGAGGCTGTTCACGTGG
AACGACATGTTCCACTCCATGCTGTGGAGCACACTCGGGTTTGTCTTCTT
TTCCGCCCTCCTCGTCTTTTCCCTCATTAAGTGTAATAGTGAACGCGCGA
AGATGTGTACCATGCCGGTAGCAAGTCCAGGTGCACAGACGGCACAGCCC
GGGCACTTCCTCCCTCCTCCATACCCGGGTGGACAGACCGCATACCCTCA
GCCTCCGCCCTACAGCGTCATCGACTCAAAAGACGAGAAGGGGTTGACCT
TCAACTGA Coding sequence (CDS) from alignment at Sc0000010:852100..858807- >transcript:BL95198_evm0 ID=transcript:BL95198_evm0|Name=transcript:BL95198_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2712bp|location=Sequence derived from alignment at Sc0000010:852100..858807- (Branchiostoma lanceolatum)
ATGATCACCTGTGGCGTCATCATCGTCAAGCCGATCCACGAGACAAACTC
TCTGGCGTTCAAGGGAACAACCTGCACCACAATCGCCGCTAACCTTACTG
GTGAGGACATTGACTGTAAGTGCGGTAAGGACTGCCACTCGGAATACCCC
TGTCTGCGCATGACTGTGTCGTATGCTGATCATGATGAGGACGGCACCAC
ATACAGCGGTGTGCTGTTCGAAAGTGATAAAAGGCTGATGCATGATGGAC
ACAGAGACGAGGATGTCCAGTGTGTGACGGCGCCATGTGACCGCAGCAGG
AGAGACAACAAGGACCAAGTCTTGGAATTTCAAGACACCTACAATGTTGG
GGAGTCCTACTCGTGTCTGTACAATCCTGACAACACCAAGCAAGTCCTGC
TGAAGAGGCTGTTCACGTGGAACGACATGTTCCACTCCATGCTGTGGAGC
ACACTCGGGTTTGTCTTCTTTTCCGCCCTCCTCGTCTTTTCCCTCATTAA
GTGTAATAGTGAACGCGCGAAGATGTGTACCATGCCGGTAGCAAGTCCAG
GTGCACAGACGGCACAGCCCGGGCACTTCCTCCCTCCTCCATACCCGGGT
GGACAGACCGCATACCCTCAGCCTCCGCCCTACAGCGTCATCGACTCAAA
AGACGAGAAGGGGTTGACCTTCAACTGAATGATCACCTGTGGCGTCATCA
TCGTCAAGCCGATCCACGAGACAAACTCTCTGGCGTTCAAGGGAACAACC
TGCACCACAATCGCCGCTAACCTTACTGGTGAGGACATTGACTGTAAGTG
CGGTAAGGACTGCCACTCGGAATACCCCTGTCTGCGCATGACTGTGTCGT
ATGCTGATCATGATGAGGACGGCACCACATACAGCGGTGTGCTGTTCGAA
AGTGATAAAAGGCTGATGCATGATGGACACAGAGACGAGGATGTCCAGTG
TGTGACGGCGCCATGTGACCGCAGCAGGAGAGACAACAAGGACCAAGTCT
TGGAATTTCAAGACACCTACAATGTTGGGGAGTCCTACTCGTGTCTGTAC
AATCCTGACAACACCAAGCAAGTCCTGCTGAAGAGGCTGTTCACGTGGAA
CGACATGTTCCACTCCATGCTGTGGAGCACACTCGGGTTTGTCTTCTTTT
CCGCCCTCCTCGTCTTTTCCCTCATTAAGTGTAATAGTGAACGCGCGAAG
ATGTGTACCATGCCGGTAGCAAGTCCAGGTGCACAGACGGCACAGCCCGG
GCACTTCCTCCCTCCTCCATACCCGGGTGGACAGACCGCATACCCTCAGC
CTCCGCCCTACAGCGTCATCGACTCAAAAGACGAGAAGGGGTTGACCTTC
AACTGAATGATCACCTGTGGCGTCATCATCGTCAAGCCGATCCACGAGAC
AAACTCTCTGGCGTTCAAGGGAACAACCTGCACCACAATCGCCGCTAACC
TTACTGGTGAGGACATTGACTGTAAGTGCGGTAAGGACTGCCACTCGGAA
TACCCCTGTCTGCGCATGACTGTGTCGTATGCTGATCATGATGAGGACGG
CACCACATACAGCGGTGTGCTGTTCGAAAGTGATAAAAGGCTGATGCATG
ATGGACACAGAGACGAGGATGTCCAGTGTGTGACGGCGCCATGTGACCGC
AGCAGGAGAGACAACAAGGACCAAGTCTTGGAATTTCAAGACACCTACAA
TGTTGGGGAGTCCTACTCGTGTCTGTACAATCCTGACAACACCAAGCAAG
TCCTGCTGAAGAGGCTGTTCACGTGGAACGACATGTTCCACTCCATGCTG
TGGAGCACACTCGGGTTTGTCTTCTTTTCCGCCCTCCTCGTCTTTTCCCT
CATTAAGTGTAATAGTGAACGCGCGAAGATGTGTACCATGCCGGTAGCAA
GTCCAGGTGCACAGACGGCACAGCCCGGGCACTTCCTCCCTCCTCCATAC
CCGGGTGGACAGACCGCATACCCTCAGCCTCCGCCCTACAGCGTCATCGA
CTCAAAAGACGAGAAGGGGTTGACCTTCAACTGAATGATCACCTGTGGCG
TCATCATCGTCAAGCCGATCCACGAGACAAACTCTCTGGCGTTCAAGGGA
ACAACCTGCACCACAATCGCCGCTAACCTTACTGGTGAGGACATTGACTG
TAAGTGCGGTAAGGACTGCCACTCGGAATACCCCTGTCTGCGCATGACTG
TGTCGTATGCTGATCATGATGAGGACGGCACCACATACAGCGGTGTGCTG
TTCGAAAGTGATAAAAGGCTGATGCATGATGGACACAGAGACGAGGATGT
CCAGTGTGTGACGGCGCCATGTGACCGCAGCAGGAGAGACAACAAGGACC
AAGTCTTGGAATTTCAAGACACCTACAATGTTGGGGAGTCCTACTCGTGT
CTGTACAATCCTGACAACACCAAGCAAGTCCTGCTGAAGAGGCTGTTCAC
GTGGAACGACATGTTCCACTCCATGCTGTGGAGCACACTCGGGTTTGTCT
TCTTTTCCGCCCTCCTCGTCTTTTCCCTCATTAAGTGTAATAGTGAACGC
GCGAAGATGTGTACCATGCCGGTAGCAAGTCCAGGTGCACAGACGGCACA
GCCCGGGCACTTCCTCCCTCCTCCATACCCGGGTGGACAGACCGCATACC
CTCAGCCTCCGCCCTACAGCGTCATCGACTCAAAAGACGAGAAGGGGTTG
ACCTTCAACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:852100..858807 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95198_evm0 |
| Biotype | protein_coding |
|
