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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95160_evm0 >transcript:BL95160_evm0-protein ID=transcript:BL95160_evm0-protein|Name=transcript:BL95160_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=272bp
MDNIFDFPEFKRAVVREIPNTINNGLRDESSKQKINVEKCRKEWENYVQV
LKDLGLEVTVIPADDSCPDCPFVEDCCVVIGDTALITRPAYESRRKERPA
IEETMRNLGLKVRVVESETATLEGGDVMFTGKEIFCGHSVRSNSEGFQVL
QETFPDFPCHQIKITPPEPHLLGTCGYAAPGVIAVFDGDDGMFTWDYISE
VAHQKYKPLWLPDHFANNCMYVNGTILHCTKQTKPESYEVFHEEMSNYDL
IAVSTKEVGKADAALTCQSLLF Run BLAST on NCBI mRNA from alignment at Sc0000008:3279788..3282985+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95160_evm0 ID=transcript:BL95160_evm0|Name=transcript:BL95160_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3198bp|location=Sequence derived from alignment at Sc0000008:3279788..3282985+ (Branchiostoma lanceolatum)
ATGGACAACATTTTCGACTTTCCCGAGTTCAAACGCGCCGTGGTTCGGGA
GATTCCGAACACCATCAACAACGGTCTGAGGGACGAGAGCTCAAAGCAGA
AAATCAACGTGGAGAAATGTCGGAAGGAGTGGGAGAATTACGTACAGGTA
CGGCTGTAAAATCACACCGAATTACAACGTAATGAGGATTAATCACCAAG
CAGATCCAACGGTTGCGAAGACCGTCTCCAACTGGCAGAATAAGTTTTTC
TTGCAACCAATTGCAAACAAAAATTCTTCTGCCAGTTGGATACGGTCTTT
GCAACCGTTGGATCTGCTTGGTGATTAATGAGGACGAAAACGTACGCTCG
TGATCTGGATTCATTTCATTAAATGTCAGTATTATGCGTTTTGCACCCGA
GCATATGTAAGGATCCGGTGAAGTCCCATTGTTTTACAACGTTTAGCTCG
TCTCTATTGCAGTGAACCTTCTTCACTCTTCTCCTAGCGGGATGGTAGCA
CTAAGAGAGAAAGCCGAAGGAACTGCTTGCGAACATTTCATTCGAACAGA
CAAATGTGGTGAGGTAGATCTAGTGACTGATATACAAGATACTGTGTTGT
AGAATTGAAACGTAAACATCGTAGGTTCTCAACAGTAAAGTACACAGTGT
GTGTTTGTGTGTGAGTGTGTGTGTGTTAGCGTATGTGTGTGTGTGTCTGT
CTGTCTGCTTGCTTGCTTGTTTTGCCGTTTGTTAACACAATCTATTTTAC
ATGTGTGATATCACTTATACAAACGAGTGTCCTGTTACTGCAGGTTCTGA
AGGACTTGGGTCTGGAGGTGACAGTCATCCCGGCAGACGACTCGTGTCCG
GACTGTCCCTTCGTGGAGGACTGCTGCGTGGTGATCGGCGACACCGCCCT
CATCACCAGGCCTGCCTACGAGTCTAGGAGAAAAGAGGTATTAATTTTTG
CTTGATAATTTATGAATGAGTGGATTGATTGATTGATTGATTGATTTATT
GGCATGAATGAATCGATTAATGAATGAATCAATGATGCGCTGTGATCAGC
GACAAGACCCTTACCACCAGACCTGCTTATGTTATGAGTCTAAGGCAGGG
TTTACACAAGCATTTCCAAGAGCAATGCCAAGTACACTCGGATTGAAAAT
GCGTGTGTAAAAAGCTGGTAACGTGTGTGTAAACTGGGCCTACTTTTGCA
GCTTGATGAAATTTCTGTTTGTTGCAGAGGCCAGCCATCGAGGAGACGAT
GCGGAACCTGGGGCTGAAGGTTCGCGTGGTGGAGAGTGAGACGGCCACTC
TGGAGGGCGGTGACGTCATGTTCACGGGTACGTAAAGAGGGGGAGATAGC
CATTTTTTGAGGGTGCAAATCGCGCTGGTTTGCGCCGCTTTTAAAATTCC
GGGCACTACATAATATATTTATTATGCATTCCAGTAAGATTTCCCTGTTT
TGACTTGACCGAGTGGATCGAATATCTGATGAAGGTTGGAGGTCCAACCG
AAAATTCATGGAGAGTCAATTTTTGTGTTGGATTAAAGCTTCAAATTATC
CCAATAGGAAAGGAGATTTTCTGCGGCCACTCCGTCAGGTCCAACAGCGA
GGGGTTCCAGGTCCTGCAGGAGACGTTCCCGGACTTCCCGTGCCACCAGA
TCAAGATCACCCCGCCCGAGCCGCACCTGCTGGGCACCTGCGGGTACGCC
GCGCCCGGGGTCATAGCCGTGTTCGATGGGGACGACGGCATGTTCACTTG
GGATGTATGTATGGACAAATATATTTAACCTCCTTGTTATTGCATTATTT
GCGTTTGGGATCGGATTCTTCACGTTTGGGATCGCATTCTTCACACTGCA
GCTAGGTGTCGCTGCTGCAGTGTGAAGAATGCGATCCCAAACGTGAAGAA
TCCGATCCCAAACGTGAAGAATCCGATCCCAAACGCAAATAATGCGATCC
AAAACGTGAAGAATGCGATCCCAAACGTGAAGAATGCGATCCCAAACGTG
AAGAATGCGATCCCAAACGTGAAGAATGCGATCCCAAACGTGGCTGCTCC
AGTCATGAAACTCAGTCATGTTTGAGACCGCATTCTTCAGCGACACTTGG
TTTGGCAAATAAATTTCTTATTCAGCGACTTATCAACCTGATGAAACTAT
TTACGAACAGTAGAAGAGTAGTCCCTTTCCCAGTACGCTAACAATGAGAT
ATACATGACTTGTATTCAGTTTCCTTTCCGCTTATATATTATGTTTATGT
ATTGACGGGATCCGTGTTACTGATGTTCCTTATAGTATGTTTTTTTGTTA
TTCTGATATTGTTTTTGTTTATGTGAAATTCAATAAAAATTTATAAGAAG
GAAAAAACAATGAGATATGTTTCACTTCATGTTCAATAATTACGGTCTGG
CATCTTTTCTCCAGTACATTAGTGAGGTTGCTCATCAGAAATACAAACCG
CTATGGCTGCCGGACCATTTTGCCAACAACTGTATGTACGTCAACGGCAC
CATCTTACACTGCACAAAACAGACCAAGCCGGAGAGCTACGAGGTAAGTT
GTTGTTTTTACCAAGAATAACATACTTTATTCAACTTCATACAAAAGATT
AATCGTTTTTTTTATGTGGCGGTCTTAGGGTACAAGGCAATATCATGAAA
GTCGACATTAAACTATATTTCAACACAAAAAATGAAACATTGAATTTTAC
GTAATAACATTTTGGCAGAATAAAGTAACGTTAGAGTGGATGCATTCCTC
AGCTAACCGGAATCTTGCGTACCGCAGTAATCCGTTAGTAAGCGTATCGT
TTAGAACCTTAATTCTGCCTGTCATATCATGGCTCAGGATGTCTTCCTGA
GGGATGACTACGGTGCGAAAGAACTGAGTAATGAAACCACTCTGAAAACA
CTAGCTTATACGACATCTTGGAACAACGTTTCTCTTTGCATCATTTCTAA
TATAACCAGCTGCTTCCGAGCCGCGTGCCTGCGAAGCTGGTGTCTTACGA
CGAAGGGCGGTTATACCGGTTATGCAGATCATACAGATTCAGAACTTTCC
ATCTTTGTAACAGTTTAGGATCACAATGTCCTTTTGCTGTTTCCAGGTGT
TTCACGAGGAAATGTCGAACTACGATCTGATCGCCGTGTCCACAAAGGAG
GTCGGGAAGGCGGACGCCGCGCTGACGTGCCAGTCTCTACTCTTCTGA Coding sequence (CDS) from alignment at Sc0000008:3279788..3282985+ >transcript:BL95160_evm0 ID=transcript:BL95160_evm0|Name=transcript:BL95160_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4914bp|location=Sequence derived from alignment at Sc0000008:3279788..3282985+ (Branchiostoma lanceolatum)
ATGGACAACATTTTCGACTTTCCCGAGTTCAAACGCGCCGTGGTTCGGGA
GATTCCGAACACCATCAACAACGGTCTGAGGGACGAGAGCTCAAAGCAGA
AAATCAACGTGGAGAAATGTCGGAAGGAGTGGGAGAATTACGTACAGGTT
CTGAAGGACTTGGGTCTGGAGGTGACAGTCATCCCGGCAGACGACTCGTG
TCCGGACTGTCCCTTCGTGGAGGACTGCTGCGTGGTGATCGGCGACACCG
CCCTCATCACCAGGCCTGCCTACGAGTCTAGGAGAAAAGAGAGGCCAGCC
ATCGAGGAGACGATGCGGAACCTGGGGCTGAAGGTTCGCGTGGTGGAGAG
TGAGACGGCCACTCTGGAGGGCGGTGACGTCATGTTCACGGGAAAGGAGA
TTTTCTGCGGCCACTCCGTCAGGTCCAACAGCGAGGGGTTCCAGGTCCTG
CAGGAGACGTTCCCGGACTTCCCGTGCCACCAGATCAAGATCACCCCGCC
CGAGCCGCACCTGCTGGGCACCTGCGGGTACGCCGCGCCCGGGGTCATAG
CCGTGTTCGATGGGGACGACGGCATGTTCACTTGGGATTACATTAGTGAG
GTTGCTCATCAGAAATACAAACCGCTATGGCTGCCGGACCATTTTGCCAA
CAACTGTATGTACGTCAACGGCACCATCTTACACTGCACAAAACAGACCA
AGCCGGAGAGCTACGAGGTGTTTCACGAGGAAATGTCGAACTACGATCTG
ATCGCCGTGTCCACAAAGGAGGTCGGGAAGGCGGACGCCGCGCTGACGTG
CCAGTCTCTACTCTTCTGAATGGACAACATTTTCGACTTTCCCGAGTTCA
AACGCGCCGTGGTTCGGGAGATTCCGAACACCATCAACAACGGTCTGAGG
GACGAGAGCTCAAAGCAGAAAATCAACGTGGAGAAATGTCGGAAGGAGTG
GGAGAATTACGTACAGGTTCTGAAGGACTTGGGTCTGGAGGTGACAGTCA
TCCCGGCAGACGACTCGTGTCCGGACTGTCCCTTCGTGGAGGACTGCTGC
GTGGTGATCGGCGACACCGCCCTCATCACCAGGCCTGCCTACGAGTCTAG
GAGAAAAGAGAGGCCAGCCATCGAGGAGACGATGCGGAACCTGGGGCTGA
AGGTTCGCGTGGTGGAGAGTGAGACGGCCACTCTGGAGGGCGGTGACGTC
ATGTTCACGGGAAAGGAGATTTTCTGCGGCCACTCCGTCAGGTCCAACAG
CGAGGGGTTCCAGGTCCTGCAGGAGACGTTCCCGGACTTCCCGTGCCACC
AGATCAAGATCACCCCGCCCGAGCCGCACCTGCTGGGCACCTGCGGGTAC
GCCGCGCCCGGGGTCATAGCCGTGTTCGATGGGGACGACGGCATGTTCAC
TTGGGATTACATTAGTGAGGTTGCTCATCAGAAATACAAACCGCTATGGC
TGCCGGACCATTTTGCCAACAACTGTATGTACGTCAACGGCACCATCTTA
CACTGCACAAAACAGACCAAGCCGGAGAGCTACGAGGTGTTTCACGAGGA
AATGTCGAACTACGATCTGATCGCCGTGTCCACAAAGGAGGTCGGGAAGG
CGGACGCCGCGCTGACGTGCCAGTCTCTACTCTTCTGAATGGACAACATT
TTCGACTTTCCCGAGTTCAAACGCGCCGTGGTTCGGGAGATTCCGAACAC
CATCAACAACGGTCTGAGGGACGAGAGCTCAAAGCAGAAAATCAACGTGG
AGAAATGTCGGAAGGAGTGGGAGAATTACGTACAGGTTCTGAAGGACTTG
GGTCTGGAGGTGACAGTCATCCCGGCAGACGACTCGTGTCCGGACTGTCC
CTTCGTGGAGGACTGCTGCGTGGTGATCGGCGACACCGCCCTCATCACCA
GGCCTGCCTACGAGTCTAGGAGAAAAGAGAGGCCAGCCATCGAGGAGACG
ATGCGGAACCTGGGGCTGAAGGTTCGCGTGGTGGAGAGTGAGACGGCCAC
TCTGGAGGGCGGTGACGTCATGTTCACGGGAAAGGAGATTTTCTGCGGCC
ACTCCGTCAGGTCCAACAGCGAGGGGTTCCAGGTCCTGCAGGAGACGTTC
CCGGACTTCCCGTGCCACCAGATCAAGATCACCCCGCCCGAGCCGCACCT
GCTGGGCACCTGCGGGTACGCCGCGCCCGGGGTCATAGCCGTGTTCGATG
GGGACGACGGCATGTTCACTTGGGATTACATTAGTGAGGTTGCTCATCAG
AAATACAAACCGCTATGGCTGCCGGACCATTTTGCCAACAACTGTATGTA
CGTCAACGGCACCATCTTACACTGCACAAAACAGACCAAGCCGGAGAGCT
ACGAGGTGTTTCACGAGGAAATGTCGAACTACGATCTGATCGCCGTGTCC
ACAAAGGAGGTCGGGAAGGCGGACGCCGCGCTGACGTGCCAGTCTCTACT
CTTCTGAATGGACAACATTTTCGACTTTCCCGAGTTCAAACGCGCCGTGG
TTCGGGAGATTCCGAACACCATCAACAACGGTCTGAGGGACGAGAGCTCA
AAGCAGAAAATCAACGTGGAGAAATGTCGGAAGGAGTGGGAGAATTACGT
ACAGGTTCTGAAGGACTTGGGTCTGGAGGTGACAGTCATCCCGGCAGACG
ACTCGTGTCCGGACTGTCCCTTCGTGGAGGACTGCTGCGTGGTGATCGGC
GACACCGCCCTCATCACCAGGCCTGCCTACGAGTCTAGGAGAAAAGAGAG
GCCAGCCATCGAGGAGACGATGCGGAACCTGGGGCTGAAGGTTCGCGTGG
TGGAGAGTGAGACGGCCACTCTGGAGGGCGGTGACGTCATGTTCACGGGA
AAGGAGATTTTCTGCGGCCACTCCGTCAGGTCCAACAGCGAGGGGTTCCA
GGTCCTGCAGGAGACGTTCCCGGACTTCCCGTGCCACCAGATCAAGATCA
CCCCGCCCGAGCCGCACCTGCTGGGCACCTGCGGGTACGCCGCGCCCGGG
GTCATAGCCGTGTTCGATGGGGACGACGGCATGTTCACTTGGGATTACAT
TAGTGAGGTTGCTCATCAGAAATACAAACCGCTATGGCTGCCGGACCATT
TTGCCAACAACTGTATGTACGTCAACGGCACCATCTTACACTGCACAAAA
CAGACCAAGCCGGAGAGCTACGAGGTGTTTCACGAGGAAATGTCGAACTA
CGATCTGATCGCCGTGTCCACAAAGGAGGTCGGGAAGGCGGACGCCGCGC
TGACGTGCCAGTCTCTACTCTTCTGAATGGACAACATTTTCGACTTTCCC
GAGTTCAAACGCGCCGTGGTTCGGGAGATTCCGAACACCATCAACAACGG
TCTGAGGGACGAGAGCTCAAAGCAGAAAATCAACGTGGAGAAATGTCGGA
AGGAGTGGGAGAATTACGTACAGGTTCTGAAGGACTTGGGTCTGGAGGTG
ACAGTCATCCCGGCAGACGACTCGTGTCCGGACTGTCCCTTCGTGGAGGA
CTGCTGCGTGGTGATCGGCGACACCGCCCTCATCACCAGGCCTGCCTACG
AGTCTAGGAGAAAAGAGAGGCCAGCCATCGAGGAGACGATGCGGAACCTG
GGGCTGAAGGTTCGCGTGGTGGAGAGTGAGACGGCCACTCTGGAGGGCGG
TGACGTCATGTTCACGGGAAAGGAGATTTTCTGCGGCCACTCCGTCAGGT
CCAACAGCGAGGGGTTCCAGGTCCTGCAGGAGACGTTCCCGGACTTCCCG
TGCCACCAGATCAAGATCACCCCGCCCGAGCCGCACCTGCTGGGCACCTG
CGGGTACGCCGCGCCCGGGGTCATAGCCGTGTTCGATGGGGACGACGGCA
TGTTCACTTGGGATTACATTAGTGAGGTTGCTCATCAGAAATACAAACCG
CTATGGCTGCCGGACCATTTTGCCAACAACTGTATGTACGTCAACGGCAC
CATCTTACACTGCACAAAACAGACCAAGCCGGAGAGCTACGAGGTGTTTC
ACGAGGAAATGTCGAACTACGATCTGATCGCCGTGTCCACAAAGGAGGTC
GGGAAGGCGGACGCCGCGCTGACGTGCCAGTCTCTACTCTTCTGAATGGA
CAACATTTTCGACTTTCCCGAGTTCAAACGCGCCGTGGTTCGGGAGATTC
CGAACACCATCAACAACGGTCTGAGGGACGAGAGCTCAAAGCAGAAAATC
AACGTGGAGAAATGTCGGAAGGAGTGGGAGAATTACGTACAGGTTCTGAA
GGACTTGGGTCTGGAGGTGACAGTCATCCCGGCAGACGACTCGTGTCCGG
ACTGTCCCTTCGTGGAGGACTGCTGCGTGGTGATCGGCGACACCGCCCTC
ATCACCAGGCCTGCCTACGAGTCTAGGAGAAAAGAGAGGCCAGCCATCGA
GGAGACGATGCGGAACCTGGGGCTGAAGGTTCGCGTGGTGGAGAGTGAGA
CGGCCACTCTGGAGGGCGGTGACGTCATGTTCACGGGAAAGGAGATTTTC
TGCGGCCACTCCGTCAGGTCCAACAGCGAGGGGTTCCAGGTCCTGCAGGA
GACGTTCCCGGACTTCCCGTGCCACCAGATCAAGATCACCCCGCCCGAGC
CGCACCTGCTGGGCACCTGCGGGTACGCCGCGCCCGGGGTCATAGCCGTG
TTCGATGGGGACGACGGCATGTTCACTTGGGATTACATTAGTGAGGTTGC
TCATCAGAAATACAAACCGCTATGGCTGCCGGACCATTTTGCCAACAACT
GTATGTACGTCAACGGCACCATCTTACACTGCACAAAACAGACCAAGCCG
GAGAGCTACGAGGTGTTTCACGAGGAAATGTCGAACTACGATCTGATCGC
CGTGTCCACAAAGGAGGTCGGGAAGGCGGACGCCGCGCTGACGTGCCAGT
CTCTACTCTTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:3279788..3282985 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95160_evm0 |
| Biotype | protein_coding |
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