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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95153_evm2 >transcript:BL95153_evm2-protein ID=transcript:BL95153_evm2-protein|Name=transcript:BL95153_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=381bp
MRPLFESGKGILVEAAPSFGRDVNGGPVRGGATSTLQQPHYSDAYLLAGD
GGLTVREAKHDDYEAVMKMARPDTFRDGFDYLPARFHQYVDDPDVFIIIA
ESGDSLVEIFLFMFHDDGEALLGKTGRQNPKYDDGGSLRRANQSIPMAFK
DFLLQRCKPTTLFQTVSEGRRTNLRKYLQFVGLWGKDKCKFDAMYFQSDL
SAVQSSLASSNTTYLPPLTPYQPPRDLHRLLPPAFSAAVLSEGRVFVDWE
PYKLSQSNMKKFVEAGCYILVDPTEPAAKSLSFGGSYMTPRGRVYHIDIH
CKDEALCKAHIINHVKNACSQYRGMITFCIMVIDQALKEAVVKYCVENLT
LSHLPHDHTYTLYETDLTTVAKAALGNKAKY Run BLAST on NCBI mRNA from alignment at Sc0000007:7041223..7044863- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95153_evm2 ID=transcript:BL95153_evm2|Name=transcript:BL95153_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=3641bp|location=Sequence derived from alignment at Sc0000007:7041223..7044863- (Branchiostoma lanceolatum)
ATGAGACCCCTGTTCGAATCTGGGAAGGGTATCCTTGTTGAAGCCGCACC
GTCTTTCGGAAGAGACGTAAATGGGGGTCCCGTTCGAGGAGGTGCCACCA
GCACGTTACAACAGCCTCATTACTCAGATGCGTACCTACTGGCTGTGATA
ATGCAACAAGGAGAACATTAACATTGCTACGATCGTATGGTTCATGGGTC
GGGCACTAGGCTGCGTAGATAAGCTTGTTCCGAGACAAAAGTGCTGAAAT
TTCCCACGATCTGTTGTTGTTGTTGTTTTTTCGCGACGCTCTCAGGACGC
GAGTACATTTACTAGTATACTATTGTGTTCTCTCTACAAGAAGTCCAACT
ATTGGATAGGAATTCTTCCCGCACTCCGCAGGAATGCATACTGTGGAATA
CCCGGTCGAGAAAGTGTGTCACCCCCCTCCCCCTTTGCGTGATAGAAATC
CCCGGGACAGTAAACTAGGTCACATACGTCAAAAATAGTTACTCAAGCAA
CTGTATAAAATTTTCAGTCAGACGTTTCAGACAGCATATCCGCCATCTTT
CGTCAGTGACTAAGGAACGATCTGGCAGAACCAGGTTTTATACTAAAACT
CTGAAGGTCACATACTTTCAGTTACGTAATCTTATGCTTAGGTCCCAACT
AGAAAAGGGGCCCGCCGGGTAGTTTACGGGCTGTTGTTTTTCATATTCCG
GCGTGACCCCTACATGGCCCCGTCGGACACCCTGCGGTCGACGGGCTATT
TTGGGGCCCGCCGGGACCCCGAATCATTTTAACTCGGACTGTAAATGCTT
ACCTATAGGCATCCCTAACTCCGTCATCAGCCTAAAGTAGTGTTGGGAAC
ATGACCGCTTCTAAACTGCCCTGTTGTCTAGTCGAAAAAGGAACACGATC
TACATAGAAGTAGTGTTCAAGAATAAACATTAAATGCAAAAAACAACAGC
AAAAACAATCTGAAGATGCAAGACATAAAAAAGATGGCCCGGAACCGAGC
TGATTGGAGACGTACGCAACTGAGACGCAGAGACCCAGACGCAGGCCACT
CAACCCAACGTTGAGGAGAATCAAGTTCTAGTATCTAGAAAGAATTTGAT
AAAGTATGACAAAATTCAATGATTTTTTCTCTTTATTGAAAGGGTGACGG
CGGGTTGACAGTAAGGGAAGCGAAGCATGACGACTACGAGGCCGTGATGA
AGATGGCTCGACCGGACACCTTCCGTGACGGTTTCGACTACCTACCAGCC
AGGTTTCACCAGTATGTGGATGATCCGGACGTTTTCATCATCATAGCAGA
AAGTGGCGACAGCCTGGTAAGTACGTGGGCATGATTTTATCTCGTGATAC
ACAATTTTGCACTTTTGAGGGCTGGCCGGCGAGTTTAGATTAACAGGTCC
AAAGGCAGTGGATTGCTTGCTTACGTCCCACAATGGAATTGACCTCCTTC
CGTGAAGGTTCTTTTCGGTGTTGTTGCAAATAAATGAAAAGTGGAGCATG
GTCATAATGATTCGATTGTAGCGTTCTAGATTGAGAGAAAAGGGGGCGTT
ATCACAGATAAGGGTAAATGTTTAACCGAACAACGGACAATTAGGACACT
ACATTGAGATAATGTATATGATTAGTAATTATACATTGGTCCAGAACACT
TCAATGTGGCAAGAGTACACTACTAAAGATGACATGAAGTTTGTAAATCT
CCCCAGAATTACGACCAGTTGGTTTAGTGAGCCAGGACTAGCTTCATATG
AGGCCATATATACCTATTCTCCAAGCAGAGGTTTCGGTCGTGTGGGAGGC
AGACGTAAAAAAACCCCGGCCACTACTACCCCACAAGACCGAAACCTCTG
CTTGGAGAATAATATATACCGGTACATTTGATTTGATTTGAATCTTAAAA
ATGGGGAGTTGTCAGCAAACAATGAAGGGATCTGGTTCAATGGACAGGGA
ACACAGTGGTAATTGGTGCATATGAATCATATGTTGTTTAGGTATATGAT
TTATATTTTCCAAACTTTTCACATTTCCACCACAGTACACAAGTTAACCA
CCCAAAGCGGTTGATTCCACGACCGTGGAAGTCAACAATCCACGATATTT
GGATATGACGTCACAGTCACCCCAAAAGTTCAACGTGGAGATTCTAAAAA
CGACAGAAAACAACAGATAAAAGACATTTGCAAACCATTTACTTAAAATG
TTTAATCTGTTTTCTTGTCTCAAAACGTTCATCAGTCAAAATCTCTTATG
GTGTTTATCTCTTACGAAATAATTTTTAATGCAGGTAGAGATCTTCCTTT
TCATGTTTCACGACGATGGCGAGGCTCTACTGGGGAAAACCGGTCGTCAA
AACCCAAAATATGACGACGGGGGTTCGTTGCGTCGGGCGAATCAGTCCAT
TCCGATGGCATTCAAAGATTTCCTCCTCCAGCGATGTAAGCCAACGACCT
TGTTTCAAACTGTCAGTGAAGGTCGCCGGACGAATCTTCGCAAATACCTG
CAGTTCGTGGGGCTTTGGGGCAAGGACAAGTGCAAGTTTGTAAGTACATC
GTGCATTCACCCGTCTTTAATATGCATTCATTTTGTTCCGCTTTAGAGGA
TTTTGAGGACAATGATTCTGACCAATGTTAATTGTTATGAGATACGCAAT
TCAGCTCCAAAGGCTGCGATGTATTTTGATCGAATAAACTTCAGAACCAG
ACTGTATGGTCCACCAACAGCCCCGGCGTACGGGACTACAGTTAGCCTTT
CTCGCTGCGTATTTGCTGGCCAGCCGTCAGTAGCCAATCACGTCGCTGCC
TACGGCCAAGATGCAACATGATTGGCTGAAAACTTTCCCTTTAACAGCAG
GAGGAGAAGTATCCGTTTGGCTGATGGATGGCCAGTGTTAACTCAGCGAA
ACGACACGCCAGGGTCGTTGATTGAAAGTGTGCATCAATGAGACATCGTC
CCCTATCCGTGTATTTTTGTTTTTGTTTCTCTCAACGTGAGGACGATAGA
CCTGTATCACGTTATAACTTGTGTACTGTGAAAATGTGTTACTATATTTA
GTGTCCTTTCCTTTTCAGGATGCCATGTACTTTCAGTCTGACTTGTCTGC
CGTCCAGAGTAGTCTGGCATCAAGCAACACGACCTACCTTCCACCGCTCA
CCCCCTACCAGCCTCCCAGGGACCTCCACCGCCTGCTGCCGCCCGCCTTC
TCGGCCGCCGTCCTGTCTGAAGGCCGTGTGTTTGTTGACTGGGAACCGTA
CAAACTTTCTCAGTCCAACATGAAGAAGTTTGTAGAAGCGGGCTGCTACA
TCCTTGTCGACCCGACCGAACCGGCCGCTAAGAGTCTTAGTTTCGGCGGG
AGTTACATGACTCCCCGAGGCAGGGTGTATCACATAGACATACACTGTAA
GGACGAGGCTTTATGCAAGGCCCACATTATAAACCACGTGAAGAACGCCT
GTAGTCAGTATAGAGGCATGATAACCTTCTGTATCATGGTGATAGACCAG
GCTTTGAAGGAAGCAGTCGTGAAATATTGTGTAGAAAATCTGACACTGAG
TCACCTGCCCCACGATCACACCTATACTCTGTATGAAACAGATCTCACCA
CCGTGGCTAAAGCTGCTCTTGGAAACAAAGCTAAGTACTAG Coding sequence (CDS) from alignment at Sc0000007:7041223..7044863- >transcript:BL95153_evm2 ID=transcript:BL95153_evm2|Name=transcript:BL95153_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=4584bp|location=Sequence derived from alignment at Sc0000007:7041223..7044863- (Branchiostoma lanceolatum)
ATGAGACCCCTGTTCGAATCTGGGAAGGGTATCCTTGTTGAAGCCGCACC
GTCTTTCGGAAGAGACGTAAATGGGGGTCCCGTTCGAGGAGGTGCCACCA
GCACGTTACAACAGCCTCATTACTCAGATGCGTACCTACTGGCTGGTGAC
GGCGGGTTGACAGTAAGGGAAGCGAAGCATGACGACTACGAGGCCGTGAT
GAAGATGGCTCGACCGGACACCTTCCGTGACGGTTTCGACTACCTACCAG
CCAGGTTTCACCAGTATGTGGATGATCCGGACGTTTTCATCATCATAGCA
GAAAGTGGCGACAGCCTGGTAGAGATCTTCCTTTTCATGTTTCACGACGA
TGGCGAGGCTCTACTGGGGAAAACCGGTCGTCAAAACCCAAAATATGACG
ACGGGGGTTCGTTGCGTCGGGCGAATCAGTCCATTCCGATGGCATTCAAA
GATTTCCTCCTCCAGCGATGTAAGCCAACGACCTTGTTTCAAACTGTCAG
TGAAGGTCGCCGGACGAATCTTCGCAAATACCTGCAGTTCGTGGGGCTTT
GGGGCAAGGACAAGTGCAAGTTTGATGCCATGTACTTTCAGTCTGACTTG
TCTGCCGTCCAGAGTAGTCTGGCATCAAGCAACACGACCTACCTTCCACC
GCTCACCCCCTACCAGCCTCCCAGGGACCTCCACCGCCTGCTGCCGCCCG
CCTTCTCGGCCGCCGTCCTGTCTGAAGGCCGTGTGTTTGTTGACTGGGAA
CCGTACAAACTTTCTCAGTCCAACATGAAGAAGTTTGTAGAAGCGGGCTG
CTACATCCTTGTCGACCCGACCGAACCGGCCGCTAAGAGTCTTAGTTTCG
GCGGGAGTTACATGACTCCCCGAGGCAGGGTGTATCACATAGACATACAC
TGTAAGGACGAGGCTTTATGCAAGGCCCACATTATAAACCACGTGAAGAA
CGCCTGTAGTCAGTATAGAGGCATGATAACCTTCTGTATCATGGTGATAG
ACCAGGCTTTGAAGGAAGCAGTCGTGAAATATTGTGTAGAAAATCTGACA
CTGAGTCACCTGCCCCACGATCACACCTATACTCTGTATGAAACAGATCT
CACCACCGTGGCTAAAGCTGCTCTTGGAAACAAAGCTAAGTACTAGATGA
GACCCCTGTTCGAATCTGGGAAGGGTATCCTTGTTGAAGCCGCACCGTCT
TTCGGAAGAGACGTAAATGGGGGTCCCGTTCGAGGAGGTGCCACCAGCAC
GTTACAACAGCCTCATTACTCAGATGCGTACCTACTGGCTGGTGACGGCG
GGTTGACAGTAAGGGAAGCGAAGCATGACGACTACGAGGCCGTGATGAAG
ATGGCTCGACCGGACACCTTCCGTGACGGTTTCGACTACCTACCAGCCAG
GTTTCACCAGTATGTGGATGATCCGGACGTTTTCATCATCATAGCAGAAA
GTGGCGACAGCCTGGTAGAGATCTTCCTTTTCATGTTTCACGACGATGGC
GAGGCTCTACTGGGGAAAACCGGTCGTCAAAACCCAAAATATGACGACGG
GGGTTCGTTGCGTCGGGCGAATCAGTCCATTCCGATGGCATTCAAAGATT
TCCTCCTCCAGCGATGTAAGCCAACGACCTTGTTTCAAACTGTCAGTGAA
GGTCGCCGGACGAATCTTCGCAAATACCTGCAGTTCGTGGGGCTTTGGGG
CAAGGACAAGTGCAAGTTTGATGCCATGTACTTTCAGTCTGACTTGTCTG
CCGTCCAGAGTAGTCTGGCATCAAGCAACACGACCTACCTTCCACCGCTC
ACCCCCTACCAGCCTCCCAGGGACCTCCACCGCCTGCTGCCGCCCGCCTT
CTCGGCCGCCGTCCTGTCTGAAGGCCGTGTGTTTGTTGACTGGGAACCGT
ACAAACTTTCTCAGTCCAACATGAAGAAGTTTGTAGAAGCGGGCTGCTAC
ATCCTTGTCGACCCGACCGAACCGGCCGCTAAGAGTCTTAGTTTCGGCGG
GAGTTACATGACTCCCCGAGGCAGGGTGTATCACATAGACATACACTGTA
AGGACGAGGCTTTATGCAAGGCCCACATTATAAACCACGTGAAGAACGCC
TGTAGTCAGTATAGAGGCATGATAACCTTCTGTATCATGGTGATAGACCA
GGCTTTGAAGGAAGCAGTCGTGAAATATTGTGTAGAAAATCTGACACTGA
GTCACCTGCCCCACGATCACACCTATACTCTGTATGAAACAGATCTCACC
ACCGTGGCTAAAGCTGCTCTTGGAAACAAAGCTAAGTACTAGATGAGACC
CCTGTTCGAATCTGGGAAGGGTATCCTTGTTGAAGCCGCACCGTCTTTCG
GAAGAGACGTAAATGGGGGTCCCGTTCGAGGAGGTGCCACCAGCACGTTA
CAACAGCCTCATTACTCAGATGCGTACCTACTGGCTGGTGACGGCGGGTT
GACAGTAAGGGAAGCGAAGCATGACGACTACGAGGCCGTGATGAAGATGG
CTCGACCGGACACCTTCCGTGACGGTTTCGACTACCTACCAGCCAGGTTT
CACCAGTATGTGGATGATCCGGACGTTTTCATCATCATAGCAGAAAGTGG
CGACAGCCTGGTAGAGATCTTCCTTTTCATGTTTCACGACGATGGCGAGG
CTCTACTGGGGAAAACCGGTCGTCAAAACCCAAAATATGACGACGGGGGT
TCGTTGCGTCGGGCGAATCAGTCCATTCCGATGGCATTCAAAGATTTCCT
CCTCCAGCGATGTAAGCCAACGACCTTGTTTCAAACTGTCAGTGAAGGTC
GCCGGACGAATCTTCGCAAATACCTGCAGTTCGTGGGGCTTTGGGGCAAG
GACAAGTGCAAGTTTGATGCCATGTACTTTCAGTCTGACTTGTCTGCCGT
CCAGAGTAGTCTGGCATCAAGCAACACGACCTACCTTCCACCGCTCACCC
CCTACCAGCCTCCCAGGGACCTCCACCGCCTGCTGCCGCCCGCCTTCTCG
GCCGCCGTCCTGTCTGAAGGCCGTGTGTTTGTTGACTGGGAACCGTACAA
ACTTTCTCAGTCCAACATGAAGAAGTTTGTAGAAGCGGGCTGCTACATCC
TTGTCGACCCGACCGAACCGGCCGCTAAGAGTCTTAGTTTCGGCGGGAGT
TACATGACTCCCCGAGGCAGGGTGTATCACATAGACATACACTGTAAGGA
CGAGGCTTTATGCAAGGCCCACATTATAAACCACGTGAAGAACGCCTGTA
GTCAGTATAGAGGCATGATAACCTTCTGTATCATGGTGATAGACCAGGCT
TTGAAGGAAGCAGTCGTGAAATATTGTGTAGAAAATCTGACACTGAGTCA
CCTGCCCCACGATCACACCTATACTCTGTATGAAACAGATCTCACCACCG
TGGCTAAAGCTGCTCTTGGAAACAAAGCTAAGTACTAGATGAGACCCCTG
TTCGAATCTGGGAAGGGTATCCTTGTTGAAGCCGCACCGTCTTTCGGAAG
AGACGTAAATGGGGGTCCCGTTCGAGGAGGTGCCACCAGCACGTTACAAC
AGCCTCATTACTCAGATGCGTACCTACTGGCTGGTGACGGCGGGTTGACA
GTAAGGGAAGCGAAGCATGACGACTACGAGGCCGTGATGAAGATGGCTCG
ACCGGACACCTTCCGTGACGGTTTCGACTACCTACCAGCCAGGTTTCACC
AGTATGTGGATGATCCGGACGTTTTCATCATCATAGCAGAAAGTGGCGAC
AGCCTGGTAGAGATCTTCCTTTTCATGTTTCACGACGATGGCGAGGCTCT
ACTGGGGAAAACCGGTCGTCAAAACCCAAAATATGACGACGGGGGTTCGT
TGCGTCGGGCGAATCAGTCCATTCCGATGGCATTCAAAGATTTCCTCCTC
CAGCGATGTAAGCCAACGACCTTGTTTCAAACTGTCAGTGAAGGTCGCCG
GACGAATCTTCGCAAATACCTGCAGTTCGTGGGGCTTTGGGGCAAGGACA
AGTGCAAGTTTGATGCCATGTACTTTCAGTCTGACTTGTCTGCCGTCCAG
AGTAGTCTGGCATCAAGCAACACGACCTACCTTCCACCGCTCACCCCCTA
CCAGCCTCCCAGGGACCTCCACCGCCTGCTGCCGCCCGCCTTCTCGGCCG
CCGTCCTGTCTGAAGGCCGTGTGTTTGTTGACTGGGAACCGTACAAACTT
TCTCAGTCCAACATGAAGAAGTTTGTAGAAGCGGGCTGCTACATCCTTGT
CGACCCGACCGAACCGGCCGCTAAGAGTCTTAGTTTCGGCGGGAGTTACA
TGACTCCCCGAGGCAGGGTGTATCACATAGACATACACTGTAAGGACGAG
GCTTTATGCAAGGCCCACATTATAAACCACGTGAAGAACGCCTGTAGTCA
GTATAGAGGCATGATAACCTTCTGTATCATGGTGATAGACCAGGCTTTGA
AGGAAGCAGTCGTGAAATATTGTGTAGAAAATCTGACACTGAGTCACCTG
CCCCACGATCACACCTATACTCTGTATGAAACAGATCTCACCACCGTGGC
TAAAGCTGCTCTTGGAAACAAAGCTAAGTACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:7041223..7044863 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95153_evm2 |
| Biotype | protein_coding |
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