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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95081_evm1 >transcript:BL95081_evm1-protein ID=transcript:BL95081_evm1-protein|Name=transcript:BL95081_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=208bp
MACSLNMTCCIPTRYSLAVLLMGMMIHFFTLRSNFSIIVVAMVKHSSKDL
GNSSRENMCHINTSHDVYTDVHKKTEVLGSKLYNESNKAWLENSTEYTIQ
DKFSWGPITQGRILGAYSYGHVLSQVLGGFLEARFGGKKVLGLNMLLASV
LTLLTPAAAFAGEWWLFVVRVLVGFVQGVVFPCTFGMLSRWAPPAERGRL
LTIATLGK Run BLAST on NCBI mRNA from alignment at Sc0000003:7251473..7255067- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95081_evm1 ID=transcript:BL95081_evm1|Name=transcript:BL95081_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3595bp|location=Sequence derived from alignment at Sc0000003:7251473..7255067- (Branchiostoma lanceolatum)
ATGGCGTGTTCCCTGAACGTAAGTGTGCTATTCTTCGTACAATTTTACCT
ATAGCTAGGGAGTTACATTTTTCTTTCCAGTTAACGTTTGCAGATATGAT
ACGGTGTCCTTGAAGCAATTTTTTTCAAGCAATTTGTACTAGTGCAATGC
GGCTTCGCTGCGGCTTGCGTTTTTAGCTAAGCACACCCGATAAGTGTGGA
CCTCCGTCTATTATTCAGTAAACAAGGTTAACCTTAACAGTATGGTGTAC
ATTTGCCACCCTACATGCGACAAACTACCAACAAACTGCCACCCTACATG
CGCCAGATGTTTGTGCACTGCAGGGACCAAAGTACACGGTCAACCAGACA
AAGCACAGCCTGCCGCCAGACACATGTACGGCTCCGAATCTGACTTCCTT
TAAGAGACTCTTGAAGTAACGGAAATGAACTAAACAAATGGACACGGGCC
ATGAACCAGCTTTCGCCCTACTATATGTTGTATGTTGTAGCAATTGTATA
TTGTTGTACCATGAATATGTAATGATATACGTTGATAGAGTTATTAGGAC
TCAAATGACTGTTATATTGTATCTGACCCTTACCTCTTACCTCTTTCCTC
ATGAACTCAATGAAAAGCGGCCTGCGTGCCGATTTGAGCTTATCATGAAT
AAACAATGGTTGAAACAAACAAACAAAAACAAAAACAAATTTAACCCCAT
TGTGTACACTTTGAGGATGTTTACTTTGAACGATTACAATGGTTAACCAA
CATGACCTGTGTCCTTAGATGACCTGCTGTATTCCAACCAGGTACTCTTT
GGCCGTCCTCCTTATGGGGATGATGATTCACTTCTTCACTCTGCGGTCAA
ACTTCAGTATCATCGTTGTAGCCATGGTGAAACATTCCTCTAAAGATTTA
GGCAACAGCTCCAGGGAAAATATGTGTCACATCAACACCTCACATGACGT
ATACACAGACGTACACAAAAAGACGGAGGTGTTAGGCTCCAAACTGTACA
ATGAGTCGAACAAAGCTTGGCTGGAAAATTCTACAGAATATACTATTCAG
GTAAGTTATTATTGCTAATGTCATTTCAATATACTAATACATATGAATTA
ATGCTTATCACTACATGTATCTACTGCAATAGTTCTTTATGTTATTTTTT
AATATTGTATAATCAAAAGAAAATCTGCTATACCGATCGTACATGAATGT
TTACTGCCATAGTAATCTAAGGTATGACAGTCCTTAACCTAGAGCTCTTA
AGAAAAGTACTTTTATTCATTTAAACTATGTACTATTGTTTTCCTTATCA
TCACCTTTATGATCGTAGGAGATAAAAACCTACCATCATCATCATCATTT
TCATTGTATTCATAACATAAGATAACTGATTATATTCAATTAGAAAGTTA
CGTTATGTGTTCGGTGCCGTTTGTGTTTACGTGTTTATGTGTAGACAGCA
TAAGTCGAAAAGGTTTTATAGGTCTAAATGATATTGACCGAGTGAGTAAG
GGTCGGAAAAAAACGATCCTGTTGGATAATGGGCCTCCTATCGTTTTTTC
AACGGTACTGCAGCGACTAAATATCATAGCCTTAAGCTCAACACTGTCAT
TTATAAACATCAGCCGCCGATATTGCTTCAAACTTTAAAAGATGATAATT
CAATAAGAGGTCAATGTGTCGTCCTTATCTTAAGTAATTATGCAGATAGC
TTTGGTGATGGTTTATACGATTATAGTATAATTATGCAAATTATAATTGT
ATTTACATAACTAGTAAGCCTTTTAAATGCCCCACGAGACATCTATTGTA
CGTAACTTGGAATGATTAACATGACTAGGCGAAGGTAAACTATCCTGGAA
TCCTTGTTTTAAAGGCACCCAGAGCATTTTATAAGGCTTGAAAACTGGAA
ATATTCTAGTTGCTGTAATATTCATAACATCAGACATTTAATGTCAGTGT
TTACCACATTTGCGTGCGGATTTCTTATCAAAAGTGCTCAAAAGCGGCAC
AAAAAAAAGCTATATGGTAATCTTTTAGTTTCACGCGCCTAGTGTAAATA
GACCATTACCATAGCCCCGCCCACCCCCGTCAAAACGTAGAAATACAAAA
TTAAAACATAAAAATGCAAATATTTTACGGTTATGCAGTCACTCTGTCAT
TGGTCGAACCGCTAATTGTGATAAACAGTCAGGAACAGTCTATTAGGGCT
TGGATTTTGTATCAGTTCTCACCACGCAACGACATCGTATCTTTGCTCCT
TTAATGTCGATATGTAATGGTTTAGTGTTATTAAAACTTAGTATGTGTAG
GAATGACTAGAAATTTGAGTTTTTTATTCAAGTTTCAAGCCTCATAAAAT
GCTCTGGATGCCTTTAAGATATATATACACTTTCGTTATTTTCACAATTT
CAGGACAAGTTTTCCTGGGGCCCCATTACACAGGGCCGTATCCTCGGCGC
CTACTCCTACGGCCATGTCCTCAGCCAGGTACTGGGAGGATTCCTGGAGG
CCAGGTTTGGTGGGAAGAAAGTTCTCGGCCTAAACATGCTGTTGGCCTCG
GTTCTGACTCTGCTGACGCCCGCGGCTGCTTTCGCTGGAGAATGGTGGCT
GTTTGTTGTTCGTGTCCTTGTTGGCTTTGTGCAGGTACAAGATGCATCCT
GCCTTTGTTCCATCATCGTAGTCTTCAAGCAGACTTACGGGTTGCAAAGA
CCGTATCCAACTGGCAGAAGGAGTTTTTATAGCAACCCAATGCTTTATAG
CAAAAACTCAAAACTCCTTCTGCCAGTTGGATACGGTCTTTGCATGCAAC
CCGTAGGTCTGCTTGGAGACTACCATCATCGCACACAGAAAGAAGTATAC
ATGGGGGCGATTATAGCACCACCTTAAATTCTTTAAAATCCTTCTTTTCC
CTGAAAATGTTGTACCCATCTGGATACTTTTAGAGTTAGAAGGAACAGGT
AGGGTGTAAGCTGTCCCGTTTTGGGCAAAATTTGTTCAGCTCCCAAGTTC
AGTTGGCGTAATGACATATGAAAGTTGTTGGTTTATACGGATGGATACAT
CAGAAATCTGGGGTCAGAGGTAAAGTTTATTTACTACTGGCAGCTTTTTT
TCAGAGTTTGAGCTGAAGAACTTTCTGTTCCTTTTGCAAAGTTACAAAAT
AAACCTTTGTGACTTTTTGTGGTAAATGATTTTAAAGATTAAAACTCGGT
TAATACTTTTATGAAGCCTTGCTTCAGTGTACCCTAATGTACTTTCCTAT
GGATAACTATGTGAATCAGCCCCGTAACGTATGTATGACACCGTCATGAA
AGAAAATGAGTATTCGGTGAATCATTTCTTGCAATGTTTTGCACTTTCGT
CTTGAATTATCAGGACGTTTATTTCCTCTTTACTGCAAAATGATACCGCA
TTTGCAATGTCCATATAGAAATGGAACTAGCACCATAGCTTATTAAGGGA
ATCGGAACTGTAAAAAGAATAGAAAGACATATCATTTCTTTGCTTTCAGG
GCGTGGTGTTCCCATGTACGTTTGGCATGTTGTCAAGATGGGCTCCGCCA
GCGGAGAGAGGCCGTCTTCTCACCATCGCCACTCTTGGTAAATAA Coding sequence (CDS) from alignment at Sc0000003:7251473..7255067- >transcript:BL95081_evm1 ID=transcript:BL95081_evm1|Name=transcript:BL95081_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2508bp|location=Sequence derived from alignment at Sc0000003:7251473..7255067- (Branchiostoma lanceolatum)
ATGGCGTGTTCCCTGAACATGACCTGCTGTATTCCAACCAGGTACTCTTT
GGCCGTCCTCCTTATGGGGATGATGATTCACTTCTTCACTCTGCGGTCAA
ACTTCAGTATCATCGTTGTAGCCATGGTGAAACATTCCTCTAAAGATTTA
GGCAACAGCTCCAGGGAAAATATGTGTCACATCAACACCTCACATGACGT
ATACACAGACGTACACAAAAAGACGGAGGTGTTAGGCTCCAAACTGTACA
ATGAGTCGAACAAAGCTTGGCTGGAAAATTCTACAGAATATACTATTCAG
GACAAGTTTTCCTGGGGCCCCATTACACAGGGCCGTATCCTCGGCGCCTA
CTCCTACGGCCATGTCCTCAGCCAGGTACTGGGAGGATTCCTGGAGGCCA
GGTTTGGTGGGAAGAAAGTTCTCGGCCTAAACATGCTGTTGGCCTCGGTT
CTGACTCTGCTGACGCCCGCGGCTGCTTTCGCTGGAGAATGGTGGCTGTT
TGTTGTTCGTGTCCTTGTTGGCTTTGTGCAGGGCGTGGTGTTCCCATGTA
CGTTTGGCATGTTGTCAAGATGGGCTCCGCCAGCGGAGAGAGGCCGTCTT
CTCACCATCGCCACTCTTGGTAAATAAATGGCGTGTTCCCTGAACATGAC
CTGCTGTATTCCAACCAGGTACTCTTTGGCCGTCCTCCTTATGGGGATGA
TGATTCACTTCTTCACTCTGCGGTCAAACTTCAGTATCATCGTTGTAGCC
ATGGTGAAACATTCCTCTAAAGATTTAGGCAACAGCTCCAGGGAAAATAT
GTGTCACATCAACACCTCACATGACGTATACACAGACGTACACAAAAAGA
CGGAGGTGTTAGGCTCCAAACTGTACAATGAGTCGAACAAAGCTTGGCTG
GAAAATTCTACAGAATATACTATTCAGGACAAGTTTTCCTGGGGCCCCAT
TACACAGGGCCGTATCCTCGGCGCCTACTCCTACGGCCATGTCCTCAGCC
AGGTACTGGGAGGATTCCTGGAGGCCAGGTTTGGTGGGAAGAAAGTTCTC
GGCCTAAACATGCTGTTGGCCTCGGTTCTGACTCTGCTGACGCCCGCGGC
TGCTTTCGCTGGAGAATGGTGGCTGTTTGTTGTTCGTGTCCTTGTTGGCT
TTGTGCAGGGCGTGGTGTTCCCATGTACGTTTGGCATGTTGTCAAGATGG
GCTCCGCCAGCGGAGAGAGGCCGTCTTCTCACCATCGCCACTCTTGGTAA
ATAAATGGCGTGTTCCCTGAACATGACCTGCTGTATTCCAACCAGGTACT
CTTTGGCCGTCCTCCTTATGGGGATGATGATTCACTTCTTCACTCTGCGG
TCAAACTTCAGTATCATCGTTGTAGCCATGGTGAAACATTCCTCTAAAGA
TTTAGGCAACAGCTCCAGGGAAAATATGTGTCACATCAACACCTCACATG
ACGTATACACAGACGTACACAAAAAGACGGAGGTGTTAGGCTCCAAACTG
TACAATGAGTCGAACAAAGCTTGGCTGGAAAATTCTACAGAATATACTAT
TCAGGACAAGTTTTCCTGGGGCCCCATTACACAGGGCCGTATCCTCGGCG
CCTACTCCTACGGCCATGTCCTCAGCCAGGTACTGGGAGGATTCCTGGAG
GCCAGGTTTGGTGGGAAGAAAGTTCTCGGCCTAAACATGCTGTTGGCCTC
GGTTCTGACTCTGCTGACGCCCGCGGCTGCTTTCGCTGGAGAATGGTGGC
TGTTTGTTGTTCGTGTCCTTGTTGGCTTTGTGCAGGGCGTGGTGTTCCCA
TGTACGTTTGGCATGTTGTCAAGATGGGCTCCGCCAGCGGAGAGAGGCCG
TCTTCTCACCATCGCCACTCTTGGTAAATAAATGGCGTGTTCCCTGAACA
TGACCTGCTGTATTCCAACCAGGTACTCTTTGGCCGTCCTCCTTATGGGG
ATGATGATTCACTTCTTCACTCTGCGGTCAAACTTCAGTATCATCGTTGT
AGCCATGGTGAAACATTCCTCTAAAGATTTAGGCAACAGCTCCAGGGAAA
ATATGTGTCACATCAACACCTCACATGACGTATACACAGACGTACACAAA
AAGACGGAGGTGTTAGGCTCCAAACTGTACAATGAGTCGAACAAAGCTTG
GCTGGAAAATTCTACAGAATATACTATTCAGGACAAGTTTTCCTGGGGCC
CCATTACACAGGGCCGTATCCTCGGCGCCTACTCCTACGGCCATGTCCTC
AGCCAGGTACTGGGAGGATTCCTGGAGGCCAGGTTTGGTGGGAAGAAAGT
TCTCGGCCTAAACATGCTGTTGGCCTCGGTTCTGACTCTGCTGACGCCCG
CGGCTGCTTTCGCTGGAGAATGGTGGCTGTTTGTTGTTCGTGTCCTTGTT
GGCTTTGTGCAGGGCGTGGTGTTCCCATGTACGTTTGGCATGTTGTCAAG
ATGGGCTCCGCCAGCGGAGAGAGGCCGTCTTCTCACCATCGCCACTCTTG
GTAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7251473..7255067 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95081_evm1 |
| Biotype | protein_coding |
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