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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95055_evm0 >transcript:BL95055_evm0-protein ID=transcript:BL95055_evm0-protein|Name=transcript:BL95055_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=217bp
MSRPQLAVPRGPAPPYDFQLQVVMVGESSVGKTCIINRFTEDKYEDPIST
VGIDFKIRIFEMFGKRIRLQIWDTAGHEKFNTITTQYYHRADGVLLVYDI
TREHTFVSIPKWLNQVDVYASHDVERYLLGNKCDQEVLREVPRERAEKFA
VEYNINFVEVSAKTNTGIEHAFRDLVESILRKRPDAPAMMDERIQLNRGD
YERSPQSATKSCSGRCV Run BLAST on NCBI mRNA from alignment at Sc0000002:1567802..1572252- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95055_evm0 ID=transcript:BL95055_evm0|Name=transcript:BL95055_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4451bp|location=Sequence derived from alignment at Sc0000002:1567802..1572252- (Branchiostoma lanceolatum)
ATGTCGCGGCCACAACTAGCAGTTCCGAGGGGCCCGGCCCCGCCGTATGA
CTTCCAGCTCCAGGTTGTGATGGTGGGTGAGTCCAGTGTGGGGAAGACCT
GTATCATCAACAGGTTTACTGAGGACAAATATGAAGACCCCATCTCTACT
GTAGGTAAGGATGAACTGATAGGCACATTCAAGCAATTCACTGACAATCT
CTGACATATGAGTCAAGTTGTTTACTGCATGCACTGGATAAAGGAAACTA
AAAGGTATGGTCGGGAATCCTACTACTAATATACTGCTAAATATACCCAA
AAGTCAAGTCTCCATCAACATGACATTAGTCCGTCATAATTTACCACAGA
CTATATCATTAATTTGAAAATCACGCCGTAAACCGCCGCCCTTTGACCCA
AACTGCCTCATGACGTCAGATCGAGGTCCTACCATTTTGGAGAGGGCGGG
TATCGCACATGTTTGTGTGGCACGCGGGCAGGCTAGCTAGAAGGGTGCTC
TGACCTCTGACGTCACAAGGCAGTTGGGGTCAAAAGGCGGCGGTTTACGG
CATGATTTTCAACTTGATAATATAGTGGTAAATTATGACGGACTAATGTA
ATGTCGATGGAGACTTGACTTTTGGGTATATTTAGCAGTATAGTATCCCA
ACCATACCTTTTAGCTAAATGAAAACGAACTGCAGGAAAATGTAGTACCA
TGTTTTATTCCATGTAATGCCCTTGAATTTAGTTAGTACATTGTGAATTT
TGATATTGTAGTGGATCATTTGTTATGCTGTTCATCATGTTGCACTTGGT
GTGTTTCAGGCATTGACTTCAAAATTAGAATATTTGAGATGTTTGGCAAG
AGAATACGACTTCAAATATGGTAAGTGAAGCATGCAGTCTCTAATGTTCC
AGGTACTTAAGTTGTGTGATATTGTGTGGATTATAATCTTTGGCAGTCCA
GTTATAATAATGTTTCATATATTGTGCATGTAACATTATATATCACATTT
AATGTGATTCTTGCTATATTCTAAGCCTTTAGTTTAAAGTTAACTTTTGG
ATCATGCCCTACTAGTAAATCATCCCTCACTCGGATGATCACAAAGGATT
GTTTCACATTACATTACACCTAGTATCTAGAATGGTAATCACTTGCTAAA
GGCATTTAGCAAGAGTTGCAGATCTTGAAAACCATTTTCTATCAATACGT
CAATGCGAAGATAAGGAAAGTGGAATAAAAGAATAATAAGTCATGTGCAT
TGTGTACATGTACCTAAATGAAGATCAGAGCTTTCCTATTAATTGTCGAA
TTGAACTGCAACCACGCAGTATCTATATCAGTGTACAAGTCATGTAACTC
TATGACCAGTGCAAGTATCTATGAACCTACACAAGTGATTTGATGCGATT
GTGTCATATAAATGTACATGTGTCACTAAAAACATAGTACATAGCTACTG
TTAATGATTGAATTTAACTGCAACATCCCTGTTTCTACATACTTTAATGT
ATCAGTATTAGTGTAAGTCCTGAGAGAAATTGAACCCCTCGGGCCTCAAC
AAATTGTTTGATAAGATTCTGGATATGCATTGTACACATTTCAGGGACAC
GGCAGGTCATGAGAAGTTCAACACCATCACCACACAGTACTACCACCGTG
CAGACGGGGTCCTGCTGGTGTATGACATCACCAGGGAACACACCTTTGTC
AGCATTCCCAAGTGGCTCAACCAAGTAGATGTGGTGAGCAATTATCATTT
CAGTGTCATGCAATGAACACGCACAAATGATGTACATTGTACAGTGCAAA
ACCAGCTTACTACTGCCTGTTTTGTGTGCCACAATTTATTGTACTTTTGC
AATTCAAATAAAGAAAGAAAATAATGATAAGTGATTTTCCCATATAACTA
GCAAATTTAATCTTAATTGCATGTTCATTCCCCAGGGGGATAAATGCACT
GGAGGCCACAGGGGGTGTTATTTTCAGTCAATATCTTTGTGCCTGAGTTT
TGGATGCAATTAACATTACTCAAAACGACCATAGTGTATACAAAGAGAAA
GTGTTATAATCATGCCCAAAGCCAAGACCAAGATGGCGGACTAACTGCTT
TTCGACCATGTGACCTGTTCTAAATATAACCCGAATCGTAGGTGCCACTC
TGAAAATACATTGTACCATTTTGATAGTGTTTTTTAATAGATTATACTAT
AGAGCAGGGGATGAGACTTTGGGGTGTTTGATCTCTTGAGTTTTACCAGT
AACAATTTTTTTGCCTTAGTACGCCTCCCATGATGTGGAAAGATACCTGC
TGGGAAACAAGTGTGATCAGGAGGTGCTTAGAGAAGTTCCAAGGGAAAGA
GCAGAAAAGGTGTGTGAAAATCTGAAGGCTCTGGGTTCGAATCCCAGTGT
TGTGCCCTTGGGAAAGGTATTCTACACCTAGTTCCTCACTCGACTCAATG
AAATGAGTGCCTATACTTTCAGTTAGGTGTGGCCTCTTGGATGTCCCGAA
CCAGTATTTGAGGAGAGTCACACCTCGAGCACATTAAAGAGCCAGTACAC
TTATTGTCAGTCAGAAGATTAGAGGTCCATCCTGGTGTTGTTGAAACCTA
CAGTCATTGTTGACATCTTGAAAGGGTGATGATGACCTGTTACATGTATG
TCAATCCTTCCACAAGACAGTGTGCTAAATCTCAGTCTACTAGATAAAAA
GAATTGGATTCATGATTGGATCAATTTTCTATCTTTCTAATTATATATTA
GTAATTGTGCTTTTTGTCCAATACTAGTACTTGCAAAATTGTATAATTAT
GTGAATAGAAAAATGAAACAAAAACTTTCTATCGTGTTGCATGATTTTTT
GTGTTGTACTCACAGCTGGAGTAAAATGACTTTGTCAGAAGTTGGAACAA
TGTTTTTTATTCTCCCGACAGTTTGCTGTTGAGTACAACATCAACTTTGT
GGAGGTCAGTGCAAAGACCAACACAGGCATCGAGCATGCCTTCAGGGACC
TAGTGGAAAGCATCCTCCGTAAGGTAAGGTATAATGATAATGGTTTATTG
GCCATAAATTACCCGTGCAATGGCAGCCAGTGCTGAATTGATGCAGGGTT
TACAATCCAGAATACACAACAGATACATACATTTGTAATTGCTCCACACT
TGCACTTTGTGGAACTGTCGCAAGGGTCTGGGCGGCCGCCATTCGACGCC
AGCAGGTGACCTCAATACAACCTTCCCCAACCGAATTCAGGTACCCATTC
ACACCTGGGTGGAGTGAGGAAAGTCATGTAAAGTGCCTTTCCCAAGGGCA
CAACATCGGGGCATTTCGGGGTTTCGACATGGGACCTCTCGGTTCTGGGC
GAAACAGCCTACCGATTGCGCCACACAATGCCACTTTAAAGTTACTCATT
GATACAATTGCCAAAAATACTGGGGAAGGTTGTATTGATATTTTCCAGCT
CTAAGTACATGAATATACTTGAAATTGAGTTCTTTTCAACATTAAAATAA
AAGGTCATTTGTGACGGTACTTGACATTCTGATAATAGATTTTACACGCT
ATTTCTGTGTTACACAAAGTAACAAACAAACAAAGCTTTCGATCACTTCT
CTGACCCTTCTCAAGTTGATTTGACCAGAGGATTCGTAATGTCACATGAC
CTGAACGGAAGTGTGACGTCAGCAACAGGTCAAAGGTGACTGGTAGTTGG
TAATGGCCCCCGTCTCGGTTAAGGGTCTTATGAAATACATGTAAGCTTTG
CTTCATTAAAACTTGAAAAGGGTCAGTCAGAGGACTGACCGAAAGCTCGT
TGGTAAGAGCTTTACTTTCACAGTGTACTGAAATGGCATAATAAAATAAT
GTGAACAAGGTTAACAACTACAAAATATACAGAAATGTACACATGTACAC
GTAGTCACAAACAAGTGTTGTAACCAGATTTATGTCATACCTGGGCCGCG
AAAACGTTCGATACGGGTGTTCTGGACTCTGTGATAATTTTCCGTATCAC
ACAGGGTTCTAAGTTGTATCACACGGGCTTCCAATGAATATTTAGAATGC
ATTTCGAGTGCGCCGGTTGCGGCGCTGTCGAAAATTCGAATGCCAGAGTC
GGAGGTTGGAATCAATGTTGTTACGAATTCTTTGTTCGAGGACACAAAAC
TCTCTCAACTTCAGAGGCATTTCGCATTGAAATGTGTGTTTTTCCAGGTT
GGTATGACATAAATGAAATACAACACGTGTTCCGCATCACCCTCGGTCCC
GGCCCTCCCGCGGGTTGCATCGCCCTCCGGCTTTTGGCCACCGGGTTGTA
TTCTATATTTATCTTCATATTTATGTGTGATGATTCTTTCCAGAGGCCGG
ACGCACCCGCCATGATGGACGAGAGAATCCAGCTGAACAGAGGCGACTAC
GAACGGTCCCCACAATCCGCCACCAAGTCATGCAGCGGGAGGTGTGTGTA
G Coding sequence (CDS) from alignment at Sc0000002:1567802..1572252- >transcript:BL95055_evm0 ID=transcript:BL95055_evm0|Name=transcript:BL95055_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3924bp|location=Sequence derived from alignment at Sc0000002:1567802..1572252- (Branchiostoma lanceolatum)
ATGTCGCGGCCACAACTAGCAGTTCCGAGGGGCCCGGCCCCGCCGTATGA
CTTCCAGCTCCAGGTTGTGATGGTGGGTGAGTCCAGTGTGGGGAAGACCT
GTATCATCAACAGGTTTACTGAGGACAAATATGAAGACCCCATCTCTACT
GTAGGCATTGACTTCAAAATTAGAATATTTGAGATGTTTGGCAAGAGAAT
ACGACTTCAAATATGGGACACGGCAGGTCATGAGAAGTTCAACACCATCA
CCACACAGTACTACCACCGTGCAGACGGGGTCCTGCTGGTGTATGACATC
ACCAGGGAACACACCTTTGTCAGCATTCCCAAGTGGCTCAACCAAGTAGA
TGTGTACGCCTCCCATGATGTGGAAAGATACCTGCTGGGAAACAAGTGTG
ATCAGGAGGTGCTTAGAGAAGTTCCAAGGGAAAGAGCAGAAAAGTTTGCT
GTTGAGTACAACATCAACTTTGTGGAGGTCAGTGCAAAGACCAACACAGG
CATCGAGCATGCCTTCAGGGACCTAGTGGAAAGCATCCTCCGTAAGAGGC
CGGACGCACCCGCCATGATGGACGAGAGAATCCAGCTGAACAGAGGCGAC
TACGAACGGTCCCCACAATCCGCCACCAAGTCATGCAGCGGGAGGTGTGT
GTAGATGTCGCGGCCACAACTAGCAGTTCCGAGGGGCCCGGCCCCGCCGT
ATGACTTCCAGCTCCAGGTTGTGATGGTGGGTGAGTCCAGTGTGGGGAAG
ACCTGTATCATCAACAGGTTTACTGAGGACAAATATGAAGACCCCATCTC
TACTGTAGGCATTGACTTCAAAATTAGAATATTTGAGATGTTTGGCAAGA
GAATACGACTTCAAATATGGGACACGGCAGGTCATGAGAAGTTCAACACC
ATCACCACACAGTACTACCACCGTGCAGACGGGGTCCTGCTGGTGTATGA
CATCACCAGGGAACACACCTTTGTCAGCATTCCCAAGTGGCTCAACCAAG
TAGATGTGTACGCCTCCCATGATGTGGAAAGATACCTGCTGGGAAACAAG
TGTGATCAGGAGGTGCTTAGAGAAGTTCCAAGGGAAAGAGCAGAAAAGTT
TGCTGTTGAGTACAACATCAACTTTGTGGAGGTCAGTGCAAAGACCAACA
CAGGCATCGAGCATGCCTTCAGGGACCTAGTGGAAAGCATCCTCCGTAAG
AGGCCGGACGCACCCGCCATGATGGACGAGAGAATCCAGCTGAACAGAGG
CGACTACGAACGGTCCCCACAATCCGCCACCAAGTCATGCAGCGGGAGGT
GTGTGTAGATGTCGCGGCCACAACTAGCAGTTCCGAGGGGCCCGGCCCCG
CCGTATGACTTCCAGCTCCAGGTTGTGATGGTGGGTGAGTCCAGTGTGGG
GAAGACCTGTATCATCAACAGGTTTACTGAGGACAAATATGAAGACCCCA
TCTCTACTGTAGGCATTGACTTCAAAATTAGAATATTTGAGATGTTTGGC
AAGAGAATACGACTTCAAATATGGGACACGGCAGGTCATGAGAAGTTCAA
CACCATCACCACACAGTACTACCACCGTGCAGACGGGGTCCTGCTGGTGT
ATGACATCACCAGGGAACACACCTTTGTCAGCATTCCCAAGTGGCTCAAC
CAAGTAGATGTGTACGCCTCCCATGATGTGGAAAGATACCTGCTGGGAAA
CAAGTGTGATCAGGAGGTGCTTAGAGAAGTTCCAAGGGAAAGAGCAGAAA
AGTTTGCTGTTGAGTACAACATCAACTTTGTGGAGGTCAGTGCAAAGACC
AACACAGGCATCGAGCATGCCTTCAGGGACCTAGTGGAAAGCATCCTCCG
TAAGAGGCCGGACGCACCCGCCATGATGGACGAGAGAATCCAGCTGAACA
GAGGCGACTACGAACGGTCCCCACAATCCGCCACCAAGTCATGCAGCGGG
AGGTGTGTGTAGATGTCGCGGCCACAACTAGCAGTTCCGAGGGGCCCGGC
CCCGCCGTATGACTTCCAGCTCCAGGTTGTGATGGTGGGTGAGTCCAGTG
TGGGGAAGACCTGTATCATCAACAGGTTTACTGAGGACAAATATGAAGAC
CCCATCTCTACTGTAGGCATTGACTTCAAAATTAGAATATTTGAGATGTT
TGGCAAGAGAATACGACTTCAAATATGGGACACGGCAGGTCATGAGAAGT
TCAACACCATCACCACACAGTACTACCACCGTGCAGACGGGGTCCTGCTG
GTGTATGACATCACCAGGGAACACACCTTTGTCAGCATTCCCAAGTGGCT
CAACCAAGTAGATGTGTACGCCTCCCATGATGTGGAAAGATACCTGCTGG
GAAACAAGTGTGATCAGGAGGTGCTTAGAGAAGTTCCAAGGGAAAGAGCA
GAAAAGTTTGCTGTTGAGTACAACATCAACTTTGTGGAGGTCAGTGCAAA
GACCAACACAGGCATCGAGCATGCCTTCAGGGACCTAGTGGAAAGCATCC
TCCGTAAGAGGCCGGACGCACCCGCCATGATGGACGAGAGAATCCAGCTG
AACAGAGGCGACTACGAACGGTCCCCACAATCCGCCACCAAGTCATGCAG
CGGGAGGTGTGTGTAGATGTCGCGGCCACAACTAGCAGTTCCGAGGGGCC
CGGCCCCGCCGTATGACTTCCAGCTCCAGGTTGTGATGGTGGGTGAGTCC
AGTGTGGGGAAGACCTGTATCATCAACAGGTTTACTGAGGACAAATATGA
AGACCCCATCTCTACTGTAGGCATTGACTTCAAAATTAGAATATTTGAGA
TGTTTGGCAAGAGAATACGACTTCAAATATGGGACACGGCAGGTCATGAG
AAGTTCAACACCATCACCACACAGTACTACCACCGTGCAGACGGGGTCCT
GCTGGTGTATGACATCACCAGGGAACACACCTTTGTCAGCATTCCCAAGT
GGCTCAACCAAGTAGATGTGTACGCCTCCCATGATGTGGAAAGATACCTG
CTGGGAAACAAGTGTGATCAGGAGGTGCTTAGAGAAGTTCCAAGGGAAAG
AGCAGAAAAGTTTGCTGTTGAGTACAACATCAACTTTGTGGAGGTCAGTG
CAAAGACCAACACAGGCATCGAGCATGCCTTCAGGGACCTAGTGGAAAGC
ATCCTCCGTAAGAGGCCGGACGCACCCGCCATGATGGACGAGAGAATCCA
GCTGAACAGAGGCGACTACGAACGGTCCCCACAATCCGCCACCAAGTCAT
GCAGCGGGAGGTGTGTGTAGATGTCGCGGCCACAACTAGCAGTTCCGAGG
GGCCCGGCCCCGCCGTATGACTTCCAGCTCCAGGTTGTGATGGTGGGTGA
GTCCAGTGTGGGGAAGACCTGTATCATCAACAGGTTTACTGAGGACAAAT
ATGAAGACCCCATCTCTACTGTAGGCATTGACTTCAAAATTAGAATATTT
GAGATGTTTGGCAAGAGAATACGACTTCAAATATGGGACACGGCAGGTCA
TGAGAAGTTCAACACCATCACCACACAGTACTACCACCGTGCAGACGGGG
TCCTGCTGGTGTATGACATCACCAGGGAACACACCTTTGTCAGCATTCCC
AAGTGGCTCAACCAAGTAGATGTGTACGCCTCCCATGATGTGGAAAGATA
CCTGCTGGGAAACAAGTGTGATCAGGAGGTGCTTAGAGAAGTTCCAAGGG
AAAGAGCAGAAAAGTTTGCTGTTGAGTACAACATCAACTTTGTGGAGGTC
AGTGCAAAGACCAACACAGGCATCGAGCATGCCTTCAGGGACCTAGTGGA
AAGCATCCTCCGTAAGAGGCCGGACGCACCCGCCATGATGGACGAGAGAA
TCCAGCTGAACAGAGGCGACTACGAACGGTCCCCACAATCCGCCACCAAG
TCATGCAGCGGGAGGTGTGTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000002 | genome | Sc0000002:1567802..1572252 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95055_evm0 |
| Biotype | protein_coding |
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