|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95052_evm1 >transcript:BL95052_evm1-protein ID=transcript:BL95052_evm1-protein|Name=transcript:BL95052_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=177bp
MAAGERKEREKRTSGREARKTDDGAPPVDWSNVDLEINLFQAMRGHKPVG
VNRHFQMACIHEKLNQMVNRHISAQQIWVHLDDMYDMPALHDSEILPFPN
SQMEFILPDDIRHPDESFDTASLKDSEMGGAKSSRGGSTNTPDSSPKRKR
TRQLASSSPSSPANPPSSTKRRRLQNV Run BLAST on NCBI mRNA from alignment at Sc0000002:8154223..8156277+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95052_evm1 ID=transcript:BL95052_evm1|Name=transcript:BL95052_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2055bp|location=Sequence derived from alignment at Sc0000002:8154223..8156277+ (Branchiostoma lanceolatum)
ATGGCGGCGGGTGAGAGAAAAGAGCGCGAGAAGCGAACGTCCGGACGAGA
AGCACGGAAAACTGACGACGGTGCGCCTCCAGTCGACTGGTCGAACGTGG
ATCTAGAGATTAACTTGTTCCAGGCGATGAGAGGACACAAGCCTGTTGGT
CAGTTGTCAATATTTTGTAGTAAGAAATCAAGTTTAAACCTGGTGTGTGG
GGAGGGGGGCAGTTGCTTTGTTTCACCTGAAACCCAGGATTTTAAAATAA
TCATCGGAGACCACGCTGAACATATCCTGTGTTACACAACCTCTCGCTTT
CAGGGCTGATTGTGCCTCCTCCCGAGAAAGGGGTCCTAGAAGTTTGAATG
TAGACAGGCTAACTCTGAACACATAATTTCTAGCAAAAATTTATAATTTA
TAATCGTCAACTCAACGCACACTTGACCAGAGTGGATATTCATAAACCGA
GGGAATCCAGCAGATCGCCAGATAAGAAATGTAAAATAAGGCCGAAAACA
AAACTAACAACAACGATATTCGCTGAAAAGATACTGCGTGAACAGACTCA
AATCGCCTTAGTGGCCTTCTGATGAAAACATAGACAGAGATACATGAAGT
TGACATCTGTCTGTATGACTATTATTATTGATTCTGGGGTGATGTGGTAC
TGCTGCTCAACCGACTGTTTATGCTATACAGGTGTGAACCGACACTTCCA
GATGGCATGTATCCATGAAAAACTTAACCAGATGGTCAACCGACACATCA
GTGCACAGCAGATCTGGGTCCACTTGGATGACATGTATGACATGCCTGCA
CTGGTAAGGAATTAGTCATGGTGTCACACATTGATTTTTACAAAGTGATA
TGCAATGTACAAGAAGACCACTAATGGGGGTGATAAAATCTGGTCTATGT
GGACAAGTGGTCACTATAGACAGGTTTATGTAATTGGAAAAAGTCATTTA
AGGGACCACCAAAAAGTGGTTATATTGGCCTTATGTTCAGAGGATCAATT
GTATACACACATGTAGGTTTGACAATACATTTTGCATCTGTTTCACTTAA
AATAACTACCCCCTTCATGTCAGCAATAGGGCTCTTGAATTATCCATTGT
ACTTGAGTGGATGCAAATTTGGAAAGTTTGCTAATTTCCCTGTGACCTTG
TTTTTTTCAGCATGACTCAGAAATCCTGCCTTTCCCAAACAGCCAGATGG
AGTTTATTCTTCCAGATGACATCAGACATCCTGATGAGTCATTTGACACA
GCTTCTCTAAAGGACTCAGAAATGGGTAAGCATATTGGGTATTATGGTAT
CTACCTGTCTTAAGCTTTTAGGAGGTCATGGCTATATGGAGCTTCTAAAA
TGATGATTTTTCAACATCGCACTCCCTGAAACTGGCAATCTACTAAAAAA
AATAACATAAGAACATGTCTGTGACACAGAAGTGGACAGACTTCAAAATG
GACAATGAAAATGCACATCCGCTGTAGAACACTGTAACGTCAAGCAGATA
CAACCTGTTTTGGTTTAACAAAAACTTAATAAGGCAATGTCGTAAAATGC
TATGCCTTAATCTAATTTAAAACAAAGCTAAGAAAATGATGAAGAAGAAG
ACCTACACAAATGCAAGAGTGTTGAAAAGCATGTTGTCTTTGTTATGTTA
TGTTTTGTCTCTTTCTTACCTCCACCCTCATGACTTCAATGAAAAGTGGC
CAATTTGAACTTGTCATGAATATGAAACTTAAAGGTTCAAACAAAGAACC
GGCTGCACATTCAAAATATGTGGTAGACATACTCAGGGAAGCTATTGCTG
AAAAAAAAAACATTCTGGTCATACAAAAGTGGCTTGAGGAGGGCTGGGGT
GAACATAGAAAACATATGGAGAACCCATGTAACCAATCATTGCTCTTGTC
TCCCAGGTGGTGCCAAGTCCAGTCGGGGAGGAAGCACCAACACACCTGAC
AGCTCACCCAAGAGGAAAAGGACGCGGCAGCTAGCTTCATCCAGCCCCTC
AAGTCCTGCTAACCCACCCAGTTCCACCAAGAGAAGGAGATTACAAAATG
TGTAG Coding sequence (CDS) from alignment at Sc0000002:8154223..8156277+ >transcript:BL95052_evm1 ID=transcript:BL95052_evm1|Name=transcript:BL95052_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2136bp|location=Sequence derived from alignment at Sc0000002:8154223..8156277+ (Branchiostoma lanceolatum)
ATGGCGGCGGGTGAGAGAAAAGAGCGCGAGAAGCGAACGTCCGGACGAGA
AGCACGGAAAACTGACGACGGTGCGCCTCCAGTCGACTGGTCGAACGTGG
ATCTAGAGATTAACTTGTTCCAGGCGATGAGAGGACACAAGCCTGTTGGT
GTGAACCGACACTTCCAGATGGCATGTATCCATGAAAAACTTAACCAGAT
GGTCAACCGACACATCAGTGCACAGCAGATCTGGGTCCACTTGGATGACA
TGTATGACATGCCTGCACTGCATGACTCAGAAATCCTGCCTTTCCCAAAC
AGCCAGATGGAGTTTATTCTTCCAGATGACATCAGACATCCTGATGAGTC
ATTTGACACAGCTTCTCTAAAGGACTCAGAAATGGGTGGTGCCAAGTCCA
GTCGGGGAGGAAGCACCAACACACCTGACAGCTCACCCAAGAGGAAAAGG
ACGCGGCAGCTAGCTTCATCCAGCCCCTCAAGTCCTGCTAACCCACCCAG
TTCCACCAAGAGAAGGAGATTACAAAATGTGTAGATGGCGGCGGGTGAGA
GAAAAGAGCGCGAGAAGCGAACGTCCGGACGAGAAGCACGGAAAACTGAC
GACGGTGCGCCTCCAGTCGACTGGTCGAACGTGGATCTAGAGATTAACTT
GTTCCAGGCGATGAGAGGACACAAGCCTGTTGGTGTGAACCGACACTTCC
AGATGGCATGTATCCATGAAAAACTTAACCAGATGGTCAACCGACACATC
AGTGCACAGCAGATCTGGGTCCACTTGGATGACATGTATGACATGCCTGC
ACTGCATGACTCAGAAATCCTGCCTTTCCCAAACAGCCAGATGGAGTTTA
TTCTTCCAGATGACATCAGACATCCTGATGAGTCATTTGACACAGCTTCT
CTAAAGGACTCAGAAATGGGTGGTGCCAAGTCCAGTCGGGGAGGAAGCAC
CAACACACCTGACAGCTCACCCAAGAGGAAAAGGACGCGGCAGCTAGCTT
CATCCAGCCCCTCAAGTCCTGCTAACCCACCCAGTTCCACCAAGAGAAGG
AGATTACAAAATGTGTAGATGGCGGCGGGTGAGAGAAAAGAGCGCGAGAA
GCGAACGTCCGGACGAGAAGCACGGAAAACTGACGACGGTGCGCCTCCAG
TCGACTGGTCGAACGTGGATCTAGAGATTAACTTGTTCCAGGCGATGAGA
GGACACAAGCCTGTTGGTGTGAACCGACACTTCCAGATGGCATGTATCCA
TGAAAAACTTAACCAGATGGTCAACCGACACATCAGTGCACAGCAGATCT
GGGTCCACTTGGATGACATGTATGACATGCCTGCACTGCATGACTCAGAA
ATCCTGCCTTTCCCAAACAGCCAGATGGAGTTTATTCTTCCAGATGACAT
CAGACATCCTGATGAGTCATTTGACACAGCTTCTCTAAAGGACTCAGAAA
TGGGTGGTGCCAAGTCCAGTCGGGGAGGAAGCACCAACACACCTGACAGC
TCACCCAAGAGGAAAAGGACGCGGCAGCTAGCTTCATCCAGCCCCTCAAG
TCCTGCTAACCCACCCAGTTCCACCAAGAGAAGGAGATTACAAAATGTGT
AGATGGCGGCGGGTGAGAGAAAAGAGCGCGAGAAGCGAACGTCCGGACGA
GAAGCACGGAAAACTGACGACGGTGCGCCTCCAGTCGACTGGTCGAACGT
GGATCTAGAGATTAACTTGTTCCAGGCGATGAGAGGACACAAGCCTGTTG
GTGTGAACCGACACTTCCAGATGGCATGTATCCATGAAAAACTTAACCAG
ATGGTCAACCGACACATCAGTGCACAGCAGATCTGGGTCCACTTGGATGA
CATGTATGACATGCCTGCACTGCATGACTCAGAAATCCTGCCTTTCCCAA
ACAGCCAGATGGAGTTTATTCTTCCAGATGACATCAGACATCCTGATGAG
TCATTTGACACAGCTTCTCTAAAGGACTCAGAAATGGGTGGTGCCAAGTC
CAGTCGGGGAGGAAGCACCAACACACCTGACAGCTCACCCAAGAGGAAAA
GGACGCGGCAGCTAGCTTCATCCAGCCCCTCAAGTCCTGCTAACCCACCC
AGTTCCACCAAGAGAAGGAGATTACAAAATGTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:8154223..8156277 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95052_evm1 |
| Biotype | protein_coding |
|
