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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95049_evm1 >transcript:BL95049_evm1-protein ID=transcript:BL95049_evm1-protein|Name=transcript:BL95049_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=183bp
MWMNDAPVKGYESDVGSRTDFRFFYPESSTLNQADLDPGAYYVVVMYKSN
DLKWLQAILTKVKPSGQFWKEVAQKLGIDPAQFLILNPQVLRVAAREHVR
LQGRWPTMGLIATTFALHYCDVVDLAGFGYGSNIFNHYYERYKTGGLKTS
THNTTAEKDYLIRLLDEGIISHDLTGVYRDNVT Run BLAST on NCBI mRNA from alignment at Sc0000002:6624072..6626263+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95049_evm1 ID=transcript:BL95049_evm1|Name=transcript:BL95049_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2192bp|location=Sequence derived from alignment at Sc0000002:6624072..6626263+ (Branchiostoma lanceolatum)
ATGTGGTAAATCGAAATAAATACATAAAAATCTATATCAAATTCATGATA
TTTCCAGTGACAGAGGGTGCAGACGATGTCTGGTTCTGGGCAGCTCCGGG
GTACTCCTGGGCAAACGACTTGGGCAGGTGATAGACAGTTATGACGTAAT
AATAAGGTTAGTTTTCACAAAATCTTCTCTTCGTAGTATAATGTATAAGA
AAAATTCTTATAAGTATTGTATATTGTAGTCTTTAAAGCAGACCACAGCA
TCACTTGCATGATTCGTGAACAATTGCTTAAATGTCCTTTTGTAAAGCCA
TGCAATTTGGGTAGAAAAGATCATCAGTACATGTAAACGGAAACTTGATA
TGCAGATGAGCAGTATAATTCAACTTCCTGAATACTTGAGTGGTAAATGA
TGAGGATGACACTAATATGCAAGCAATATATGTCTGTCGTTAGCCACGAA
TCATACAAAGTTGGCATTCTTTGTATAGTCGGGAAAACAATCGTTAGCAA
AGTTACGAGGTGGTGGAACTCTTAGCTGGTCTAACATGGTGTCATTTTCC
CCGGCAGGATGAATGATGCTCCAGTCAAAGGTTACGAAAGTGATGTGGGG
TCTCGGACCGACTTTCGATTCTTTTACCCGGAGAGTTCCACTCTGAACCA
GGCCGACCTTGACCCTGGTGCCTACTACGTTGTAGTCATGTACAAGAGTA
ACGACTTGAAATGGCTGCAAGCTATCCTCACTAAGGTACGGCAAGGACTG
GGATACTAGAGATACAAAACGTTTAATTTTTGCAAAATCTATATCTACAA
ACTTATTTTGTTATAGTGAAGCTTTGAATCAAACGTATTGAGAAATATGA
TTTCTGAAGTGCGCATCTAAGTCTGTTGTAGAGTCTAATTCTAGTAGGCG
GATACGTAGAGATCAGTACGACAACGTTTTCTCAAGGCATACCAGATTAG
AAACGTCATTCACTTAGTATGTCGAAGGAGGTTTTAACCTCCTTAGTATG
TTTTAATAGTTATAAGGATCACAATAATGCATTGAATCGATTTCGTTTTG
GGAAACTGTTGTCATCTAGGTAAAACCTTCCGGTCAGTTTTGGAAGGAGG
TTGCACAGAAGCTGGGCATCGATCCTGCACAGTTCCTGATTCTCAACCCC
CAGGTTCTACGTGTGGCGGCACGGGAGCATGTCAGACTACAGGTAACGTA
GCGCTACCTTATGTTCGATTTGTCAAAACGTCATTTTTCTTAAAAACACG
CGGACAGAGCCAAATGTTTAATCTATGGGAAGAAAAATCAGCTCTCATAA
AAATATGGTCTATAGCTTTTTCTCCGCCTGCTTATCGCCGTTTGAGCATG
CATTTATTCTGAGGTCTACGTTGAAGAGTTATGCTAGAGGGACCTATTGT
CGTTCACTTGTGTCTTTCTCCTTCTGCTACTTAATTGTGAGTTCTACGTT
AAAGACATAGACTCGACAAATTGTCCCCAAACGTATCCAAAGTAGTCCGC
AAATCAAACACGTTAAAGAACGGGTCCCCTGTACGAGGAGGGGCCTCCAG
CACGTTAAAGGGGAAGGGTTGACAAACCCTTCCTGTAAAGATATACCCTG
CTACTGAAATAGCAAGGACGAAATTCGGGTTGTGTTGCCCGCGAGGTCCT
TACCGAATAAAATCATCATCATCAATAGCAAAGTTTTTATTCACAACCAC
GTATTCAATAAGAGCCGATGTTTGAATGATGTCATCTTCATCATCAGTGC
GATTCTGAATGGTTCACAGTACACTCAAAGCCAGGTGTAACTGCCAACAA
AGGCATTTTTGATGCTATTCAATCATTCACCAACCTGATGAAATTATTCA
CGGAATTCGAAGCAAGGAAACTTGCTGTCCTGTGTACCACTAGGGTCTGA
ACGAACATGTATCCTCATACTTCTTTCCTTTCTTCTCCATACACAGGGTA
GGTGGCCCACCATGGGTCTGATAGCCACCACCTTCGCCCTTCACTACTGT
GACGTGGTGGACCTAGCCGGGTTTGGGTACGGTTCCAACATCTTCAACCA
CTACTACGAGCGCTACAAAACTGGAGGTCTAAAGACGTCAACACATAATA
CAACCGCAGAAAAGGACTATCTTATACGGCTGCTGGATGAAGGAATTATA
AGTCACGATTTAACTGGAGTTTATAGGGATAATGTCACATAG Coding sequence (CDS) from alignment at Sc0000002:6624072..6626263+ >transcript:BL95049_evm1 ID=transcript:BL95049_evm1|Name=transcript:BL95049_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2208bp|location=Sequence derived from alignment at Sc0000002:6624072..6626263+ (Branchiostoma lanceolatum)
ATGTGGATGAATGATGCTCCAGTCAAAGGTTACGAAAGTGATGTGGGGTC
TCGGACCGACTTTCGATTCTTTTACCCGGAGAGTTCCACTCTGAACCAGG
CCGACCTTGACCCTGGTGCCTACTACGTTGTAGTCATGTACAAGAGTAAC
GACTTGAAATGGCTGCAAGCTATCCTCACTAAGGTAAAACCTTCCGGTCA
GTTTTGGAAGGAGGTTGCACAGAAGCTGGGCATCGATCCTGCACAGTTCC
TGATTCTCAACCCCCAGGTTCTACGTGTGGCGGCACGGGAGCATGTCAGA
CTACAGGGTAGGTGGCCCACCATGGGTCTGATAGCCACCACCTTCGCCCT
TCACTACTGTGACGTGGTGGACCTAGCCGGGTTTGGGTACGGTTCCAACA
TCTTCAACCACTACTACGAGCGCTACAAAACTGGAGGTCTAAAGACGTCA
ACACATAATACAACCGCAGAAAAGGACTATCTTATACGGCTGCTGGATGA
AGGAATTATAAGTCACGATTTAACTGGAGTTTATAGGGATAATGTCACAT
AGATGTGGATGAATGATGCTCCAGTCAAAGGTTACGAAAGTGATGTGGGG
TCTCGGACCGACTTTCGATTCTTTTACCCGGAGAGTTCCACTCTGAACCA
GGCCGACCTTGACCCTGGTGCCTACTACGTTGTAGTCATGTACAAGAGTA
ACGACTTGAAATGGCTGCAAGCTATCCTCACTAAGGTAAAACCTTCCGGT
CAGTTTTGGAAGGAGGTTGCACAGAAGCTGGGCATCGATCCTGCACAGTT
CCTGATTCTCAACCCCCAGGTTCTACGTGTGGCGGCACGGGAGCATGTCA
GACTACAGGGTAGGTGGCCCACCATGGGTCTGATAGCCACCACCTTCGCC
CTTCACTACTGTGACGTGGTGGACCTAGCCGGGTTTGGGTACGGTTCCAA
CATCTTCAACCACTACTACGAGCGCTACAAAACTGGAGGTCTAAAGACGT
CAACACATAATACAACCGCAGAAAAGGACTATCTTATACGGCTGCTGGAT
GAAGGAATTATAAGTCACGATTTAACTGGAGTTTATAGGGATAATGTCAC
ATAGATGTGGATGAATGATGCTCCAGTCAAAGGTTACGAAAGTGATGTGG
GGTCTCGGACCGACTTTCGATTCTTTTACCCGGAGAGTTCCACTCTGAAC
CAGGCCGACCTTGACCCTGGTGCCTACTACGTTGTAGTCATGTACAAGAG
TAACGACTTGAAATGGCTGCAAGCTATCCTCACTAAGGTAAAACCTTCCG
GTCAGTTTTGGAAGGAGGTTGCACAGAAGCTGGGCATCGATCCTGCACAG
TTCCTGATTCTCAACCCCCAGGTTCTACGTGTGGCGGCACGGGAGCATGT
CAGACTACAGGGTAGGTGGCCCACCATGGGTCTGATAGCCACCACCTTCG
CCCTTCACTACTGTGACGTGGTGGACCTAGCCGGGTTTGGGTACGGTTCC
AACATCTTCAACCACTACTACGAGCGCTACAAAACTGGAGGTCTAAAGAC
GTCAACACATAATACAACCGCAGAAAAGGACTATCTTATACGGCTGCTGG
ATGAAGGAATTATAAGTCACGATTTAACTGGAGTTTATAGGGATAATGTC
ACATAGATGTGGATGAATGATGCTCCAGTCAAAGGTTACGAAAGTGATGT
GGGGTCTCGGACCGACTTTCGATTCTTTTACCCGGAGAGTTCCACTCTGA
ACCAGGCCGACCTTGACCCTGGTGCCTACTACGTTGTAGTCATGTACAAG
AGTAACGACTTGAAATGGCTGCAAGCTATCCTCACTAAGGTAAAACCTTC
CGGTCAGTTTTGGAAGGAGGTTGCACAGAAGCTGGGCATCGATCCTGCAC
AGTTCCTGATTCTCAACCCCCAGGTTCTACGTGTGGCGGCACGGGAGCAT
GTCAGACTACAGGGTAGGTGGCCCACCATGGGTCTGATAGCCACCACCTT
CGCCCTTCACTACTGTGACGTGGTGGACCTAGCCGGGTTTGGGTACGGTT
CCAACATCTTCAACCACTACTACGAGCGCTACAAAACTGGAGGTCTAAAG
ACGTCAACACATAATACAACCGCAGAAAAGGACTATCTTATACGGCTGCT
GGATGAAGGAATTATAAGTCACGATTTAACTGGAGTTTATAGGGATAATG
TCACATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:6624072..6626263 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95049_evm1 |
| Biotype | protein_coding |
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