transcript:BL95048_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95048_evm0
Unique Nametranscript:BL95048_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95048_evm0

>transcript:BL95048_evm0-protein ID=transcript:BL95048_evm0-protein|Name=transcript:BL95048_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=154bp
MKRLEALEEFDQELKEDVKKVEKEAAWELAMEELDNLAEILKGKSEVNAA
VFILGSFQKKEESGLQLDTEAAEMEENGGGLEEETGGGLEMEEETGGGLE
MGEENDGGLEEENDGSLVMEELKELEEELEVLEEDLQKGKRTDVLDDFTS
QGSP
Run BLAST on NCBI

mRNA from alignment at Sc0000002:5666778..5667545+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95048_evm0 ID=transcript:BL95048_evm0|Name=transcript:BL95048_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=768bp|location=Sequence derived from alignment at Sc0000002:5666778..5667545+ (Branchiostoma lanceolatum)
ATGAAGAGGCTAGAGGCCTTGGAGGAATTCGACCAGGAATTAAAGGAGGA CGTTAAGAAGGTCGAGAAAGAAGCAGCATGGGAACTGGCGATGGAGGAGT TGGACAATCTGGCCGAGATATTGAAGGGAAAATCTGAAGGTCAACTTCAA GATGATGCAGGTACATCATTAACTATTGATAAATGAATGTCATACTGAAT GGAAATTTTTTACACTTCCCAATTGTAATTTGAGTCATAATTCAATGCTT CGCCAATTTAAAGTTAACGCAGCTGTCTTTATCTTAGGCTCATTCCAGAA GAAGGAGGAATCTGGGCTGCAACTTGACACCGAAGCTGCAGAAATGGAGG AGAACGGGGGAGGTCTGGAGGAGGAGACCGGGGGAGGACTAGAGATGGAG GAGGAGACCGGTGGAGGTCTGGAGATGGGGGAGGAGAACGATGGGGGCCT GGAGGAAGAGAACGATGGAAGCCTTGTGATGGAGGAGTTAAAGGAGCTGG AGGAAGAGCTGGAAGTTCTGGAGGAAGATCTTCAGAAGGGGAAGTAGGTA AGACTACTGTACATGAAGGATATCACGTCAGAAAAGGTCAACATAGTTCT AATGCATTGTTTTTGACAATTCACTCGTGGAAAACTATGTGAAAAAGGAA TAGTTTGGTGTTTTCTGTGGGTTTGCTATGATTACTAAATTAANTAAAAC TAACCTGTTCATTTTCTTTCAGACGGACAGATGTGCTGGATGACTTCACA TCCCAAGGCTCCCCTTGA

Coding sequence (CDS) from alignment at Sc0000002:5666778..5667545+

>transcript:BL95048_evm0 ID=transcript:BL95048_evm0|Name=transcript:BL95048_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1395bp|location=Sequence derived from alignment at Sc0000002:5666778..5667545+ (Branchiostoma lanceolatum)
ATGAAGAGGCTAGAGGCCTTGGAGGAATTCGACCAGGAATTAAAGGAGGA
CGTTAAGAAGGTCGAGAAAGAAGCAGCATGGGAACTGGCGATGGAGGAGT
TGGACAATCTGGCCGAGATATTGAAGGGAAAATCTGAAGTTAACGCAGCT
GTCTTTATCTTAGGCTCATTCCAGAAGAAGGAGGAATCTGGGCTGCAACT
TGACACCGAAGCTGCAGAAATGGAGGAGAACGGGGGAGGTCTGGAGGAGG
AGACCGGGGGAGGACTAGAGATGGAGGAGGAGACCGGTGGAGGTCTGGAG
ATGGGGGAGGAGAACGATGGGGGCCTGGAGGAAGAGAACGATGGAAGCCT
TGTGATGGAGGAGTTAAAGGAGCTGGAGGAAGAGCTGGAAGTTCTGGAGG
AAGATCTTCAGAAGGGGAAACGGACAGATGTGCTGGATGACTTCACATCC
CAAGGCTCCCCTTGAATGAAGAGGCTAGAGGCCTTGGAGGAATTCGACCA
GGAATTAAAGGAGGACGTTAAGAAGGTCGAGAAAGAAGCAGCATGGGAAC
TGGCGATGGAGGAGTTGGACAATCTGGCCGAGATATTGAAGGGAAAATCT
GAAGTTAACGCAGCTGTCTTTATCTTAGGCTCATTCCAGAAGAAGGAGGA
ATCTGGGCTGCAACTTGACACCGAAGCTGCAGAAATGGAGGAGAACGGGG
GAGGTCTGGAGGAGGAGACCGGGGGAGGACTAGAGATGGAGGAGGAGACC
GGTGGAGGTCTGGAGATGGGGGAGGAGAACGATGGGGGCCTGGAGGAAGA
GAACGATGGAAGCCTTGTGATGGAGGAGTTAAAGGAGCTGGAGGAAGAGC
TGGAAGTTCTGGAGGAAGATCTTCAGAAGGGGAAACGGACAGATGTGCTG
GATGACTTCACATCCCAAGGCTCCCCTTGAATGAAGAGGCTAGAGGCCTT
GGAGGAATTCGACCAGGAATTAAAGGAGGACGTTAAGAAGGTCGAGAAAG
AAGCAGCATGGGAACTGGCGATGGAGGAGTTGGACAATCTGGCCGAGATA
TTGAAGGGAAAATCTGAAGTTAACGCAGCTGTCTTTATCTTAGGCTCATT
CCAGAAGAAGGAGGAATCTGGGCTGCAACTTGACACCGAAGCTGCAGAAA
TGGAGGAGAACGGGGGAGGTCTGGAGGAGGAGACCGGGGGAGGACTAGAG
ATGGAGGAGGAGACCGGTGGAGGTCTGGAGATGGGGGAGGAGAACGATGG
GGGCCTGGAGGAAGAGAACGATGGAAGCCTTGTGATGGAGGAGTTAAAGG
AGCTGGAGGAAGAGCTGGAAGTTCTGGAGGAAGATCTTCAGAAGGGGAAA
CGGACAGATGTGCTGGATGACTTCACATCCCAAGGCTCCCCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95048gene:BL95048Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95048_evm0-E1BL95048_evm0-E1-1564476830-36880Branchiostoma lanceolatumexon
BL95048_evm0-E2BL95048_evm0-E2-1564476830-36882Branchiostoma lanceolatumexon
BL95048_evm0-E3BL95048_evm0-E3-1564476830-36884Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95048_evm0transcript:BL95048_evm0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000002genomeSc0000002:5666778..5667545 +
Properties
Property NameValue
Transcript idBL95048_evm0
Biotypeprotein_coding