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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95046_evm2 >transcript:BL95046_evm2-protein ID=transcript:BL95046_evm2-protein|Name=transcript:BL95046_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=182bp
MKTLAVLVMVLSVALLVDVGEGWFWRRRRHRTGKRLGVLEKVQEDVKKVE
GEAAWELAMEELDNLAEILKGKSEGQLQDDAGSFQKKEESGLQIDGEAAE
MKETGGGLEEDETDGGLMEGEQTGGGLEMEGENDGGLEEENDGGLVMEEL
KELEEELEVLEEDLQKGKRTDVLDDFTSQGNP Run BLAST on NCBI mRNA from alignment at Sc0000002:5669907..5677009+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95046_evm2 ID=transcript:BL95046_evm2|Name=transcript:BL95046_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=7103bp|location=Sequence derived from alignment at Sc0000002:5669907..5677009+ (Branchiostoma lanceolatum)
ATGAAGACCCTTGCAGTTTTAGTGATGGTCCTTTCGGTCGCCCTGCTGGT
CGATGTTGGAGAAGGATGGTTCTGGCGACGACGACGACACCGTACGTACA
TATTTTTTTTGAATTTGGTAGCGATATTTTTTTCCGTTTCTTAAGTGTCA
TCTTTTTTATCAATCATTATAGACGTATCTGACGCAGTGTACGAATCAAC
AAGCTGGGTGCTACATGTAGCTGTGAAAATATACACACAAGACATGTACG
TTTTACGTTGTGTGTGTGTGTACATGTGTGTTCGTGTGTGTGTGTGTGTG
TCATTGCGTGTTAATGTATGTATGTGTGTGTGTGTGACTGCGTGTGTATG
TATGTATGCATGTGTGTATGTGTATGTGTGTGTGTGTGTGATGGGTGTGT
ACGTATGTGTGTGTGTCTGCCTCTGTGTGTGTGTGTGTGTGTGTATGTGT
GCGTGACTGCGTGTTTGTGTATGTATGTGTGTGTCTTTCTGTGTGTGCAG
GTTTGTGTGTGTTACAGTGTGTTTGTGCATGTATGCGTGTGTGTGTTTCT
GTCTGTCTGTCTGTGTGTGTGCGTGTGTGTGTGTGACTGCGTGTTTGTGT
GTGCGCGCGTGTGTGTATGTGAGGGAGTGTGACTGTATGTGTGTTTGTAT
GTATGTGTATGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGCGTATGTGT
GTGATTGTGCGTGTGTGCGGCTGTGTGTGTGTGTTTTTGTGTGTGTGTGT
GTGTGTTTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTGTAAGTGTGTG
TGTGTGGCTCAACTGGAACGTCTCCGTGTATAATTACCTATCAAACATAA
TGATCTTACCCCTGGAAGGATTGATAACCATTCAACTAGTGTTGTGTTAT
TCATAAAGGCACAGGAAAGAGGTTAGGGGTCTTAGAGAAAGTACAGGAAG
ACGTTAAGAAGGTTGAGGGGGAGGCAGCCTGGGAACTGGCGATGGAGGAG
TTGGACAATCTGGCTGAGGTATTGAAAGGAGATGCCGAAGGTCAACTTCA
AGAAGATACAGGTACAACATTAAATGTTGATGGATAAATGTCCCGAAATG
AGTTTTTCACACGTCCCAGTTTCAATTTGAAGCATATCACAATGAAACAC
TATTTAAAAAAGTGGCTTTTTCTTAGGGCCATTCCAGAAGAAGGAAGAAT
CTGAGCTGCAGCTTGACGGTGAAGCTACCAACATGGAAGAGACTGGTGGA
GGTTTGGAGGAGGAGGAGGAGGAGAACGATGGAGGTCATGTGATGGAGAA
GTTAGAGGAGCTGGAGGACAAGCTAGATGTTCTAAAGGAAGATCTACAGC
AGGGCTAGCAGGTACGATATCTTCGCAATTCATTCGTGGAAAACAATATA
AAGGGTGAACAAATCGATTTTTTGTTTGTGGATTTAGTATCAATTGAATG
TAAACTTACTTGTTCATTCTCTTTCAGACGGGCAGATGTGGTGGGTGCCT
TTACGCCCCAAGGCAACTCGTGAGGAAAATTAGAAACAACGTTTTGAAAT
AGTTTAACGCACAAAAGCACACAGTAGACTAATGCATTACATTATTCACG
AAGTCTGCTTCAATACAGCACTTTTCGCCTATGAAATATTGCTGCGTATC
TGCAGTCTAAGATGATTTCCATCTTAGTGTTCCTTCTACGTACTAGTCAG
TCGTAACTAAACAGGATCTGCCCAAAGATGTACTACTGTTTGATTGTGCT
TCGCTGGGAGCATTTTTCGACTATTTTTTGTTCTATTTACATAATTACAA
GTATCACCTTGGCTGCCAATGTGCTCACAATGTCTGATGTTTCACGCCGC
AGTGCATGAGGATCAAGTAAATATATGGAATATTTCTGTAGGTTTAAAGC
GAATAAAATGTTTGCTTTCACTCCGTGTTTCGTTCTCAATGGGCTGAGAT
GAACGATATCAATCTCTTTTTTAAAAAGATTGTGAGATGCTGTCGAGATG
TCAAAGTTCCTTCCCGCAAATGATAGTCTTCATGAAGCTGATTTATAAAA
TGGCAGGTTGAAATGATTTATTTATACCTTTTGTAATTATTACTAAAATT
TACCACATTGTTGCAAATCTAATTGCATCACTTAGATTAACTTAGCTCAT
TTAGGAAAGTGTGTTTGTGTGTTAGTGTGTTAGTGTGTGTGTGTGTGTTT
GTGTGTATGTGTGTGTGTATGTGTATGTGTGTGTGCGTGTGTACGTATGT
GTGTGTGTGTGTATTTATGTGTATGTATGTGTGTGCGTGTGTGCATGTGT
GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTNTGTGTGTGTGC
ATGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTTGATATCATAACTAGAGAAGTTATGAATGGATCTTATTTC
ATATTTCATGTGTGGATGTCCGATTATCTTGCGCCGCCGAAAAATGTTGA
CATTTTGAACCTTCTTAAATGCTATTACCTGAGGAAAATAGGCATACTTT
ACCAAATAAGTTTTTCCATGGCCCTCCCGCCGGCTCAAAAAACTGCATGG
CCCTTGCCCAAGGCCAAAACGTTTTCAATGCCCCCCCCCCCTTTACAGCA
GCCACCCCTCGCTAAATATCGTGAATTATATCATGCTAAAAGGAACGAAC
GACCATTTGATACTCTCAACTACCATAGTGACTCTAAAAAGCGTAGTTTT
ATTACACTTGACATAGAAACAAACATTGATATCTGTCTTTGAGCCCAGAA
AAAAGGCAAAGATTGGTGCCGTCCTTGGTGCTGATCTCATTATCTGCGCC
TGCCGTGCTATAGCGGCCTGCTAGGTGGCGCTTATCATTGTATCATATTT
TGGTGTGGAATAAGAGAACTTTGTTCCGCATAGAAAACTAGAGTTCCACG
ACCTCATACCTTCGCCTAATGNAACTAGAGTTCCACGACCTCATACCTTC
GCCAAATGATTTTAACCTTTATGACTGACGTATTAGGAGTGTTTCTCATC
AATTATAAATCATACCAGTTGATTGTCTTAAAATATAACATGTCCAAAGT
ATGAGCTTAACAAATTATGAGCTCAACAAAGAAGGTTATGCTGATATTTT
TTTATTAATTATGCAAATGAGGCCCTTATTAGCATAATTTGATTCAACGA
TGTTCACATTCACATAACTTCCCGATGCCACAAAAAAGGATTAAATGTAT
GAAATTGCCGTCATTTGCCAGTGTGGAATTAGAGAAGTTACTCATTAAGT
ATGCAAATTAGGCCCACATTAGCATATTTTCTATCTATAAACATTCCTCT
CTTCCTCAGTTACAATTTGAATAGTCATATCATGGAACAAAGCGGATTTT
TAAAGTTGCCTCATTAATTATGCAAATTAGAATCTGATTTGCATAATTAT
TGTCCAATCATACTAAGCATCACACAAGCTATCTACATACCAAAAATAAT
GACCATCCATCAAGCCCATCTTGTTATAGTATTTCCTCATTAATTATGCA
AATGAGGTCTTCATTTGCATAGTTCATATCAATTAATATTTCTCTCTTCC
TCAGTTACATATGTCACATGTTTCAGAGTCCTATCATGGAATTTGGCGGA
TGTATAAACTTTCCTCATTAATTATGCAAATTAGATACTGATTTGCATAA
GAAGTGTCTAATCATGTACATCATCACTCAAGCTATCTACCTACCAAAAA
TCATTACCATCCATCAAGCCCTTCTTGAGTTATTCCCTTTCAAAGTCAGA
CGCAAAACCTGCTCCTGCAGTTCCAAAAAAGCCGCTAGGGGGCCCAAACC
CACACCACTTACTCTCTGTCCAAAGATCTATCTACCACTCAAAAATAAGT
TCCATAGCATGTCCAGAACACGAGATATCAAAACAGGAAGTTCCGCTGCA
GTACCGTAAGAAGCCGCTAGGGGGCCCAAAATCTAATCGTTTTTAGGTCT
CATCAAAACCTACCAACATACTAAATACCAAGACAATCCATCAAGGCGTT
CTTGAGTTATTCTGTGCCACTACAAACAGACAAACAAACAAGCAGACAAA
CAAACGCTACCCTCTGCATAACCTTCTCGGCGAAGGTAATGATCCTACTC
ACATACACATGCAACAATTGTAACGTTACGTGCATTCTGAGACCCGGGGT
TGAAAGGTTGTCGTAGAAAAAGAAGTGTCATCTTATTATAATTGCAGTAG
CTATGTATAGTGGTGTGTGTCCGTGTGTTTTGAACTCTCGTGTCAGACGT
CTTGACCGGTGTAAAGGGTTCGAAGAAGACAGTCGCGCAATTGCAGTTTA
CTTCAAAATACTACCAGAGTTCCACAACCCAAGACCTCAGATCATAATTT
TAGTCCTGTACTGATATTCCCTTTAGAACAACTTATTCTATTGAACAGGC
CAGGCTTACTTTATGCCAAGTACAAAGTTTAAAGATATTATTTTCTTTTA
GCACAAAGATATGAAATTTACTCGCGAATTATGCAATTCATGTTCAATTT
AAGCATGATATTTCATACAATATTCATTACTAACTAATATATTAAATATC
ATACATACATGTATATAAACGTCGTGGTCATGAAAGTCTCATAATTCAGC
ACTAAGAAAGAAACCGCGGGGGCACTAAACCTAATTTTCACAAATTCAAC
GTCTCGAGCTATCCTGTTAGAATTTAAACATACGAACAGACCCAAACAGG
CAACACAATCCACAAGCATGATAAGGCAAAGTTTAATGAACCCTCCCACC
GCAAAAAGTTGTCAGACCAGCTTTGGCCTTGCAACAGGGACAGGCGCGAT
AATCACACGTTACCTACACGAGATTGGTGGCGGCGCTGCAGCGCTTAAGA
ATCAAGCCTCCTTTCTAACTTCTGGTCACAATCAGACTCTTCTCAGCTCT
TCCTCTGTTGAAGCTACACCGTAAAGGTAAGNAGTTCTTCCTCTGTTAAA
GCTACACCGAAAAGGTAAGATTTCTCTAGTAAACGCCGTAGTGAGTTTAA
CGTTAGCTATGATCTGTTGAACTTGTAATGAAATTCAGGGCTGTTGCTAC
GGCGCAGTCACGTGCACATTAATCGCAGGTCGTAGTGTAATCTTGATATC
GTAAGCAGGCTATAGCTATTACAGAAAAAAAACTGCAGGCAAGGATCTAA
GACAGCCTTTTCGGTAACAAGACAATTGAATTTTGTAAGGCACATGCACG
AATATCCCAACTCGGAATGCCCTCAGTTTGTCACCGTACGACTATCGTGA
CCGGGCCCCTACCACCGTTACGTTAAGTATCAATCATCCATTTTGCTTTA
GTATTTTGTACACATTTGTACCTGTTTCTAACAGTATGTGTAGGACGAGG
TAATCAGCACAAAAACATGACGTTTATTCGGACGCTGCCATTGTTATAAT
GTAATGAGTCAGTCAGCCTTGGTGATACACTTAAGTCAGGGTCCTTGAAA
CATGGGTGGACTTAGCTTTAACTAGCTCTAGGAATGTCTTGAAGCATTCA
GAAATGTTTTTTCCAGAAAAATGTTTCAAAAGCGTACTATTAGGTGAGTA
AACACAAAGCGGTGGCTTTTCATTCATGACTAATAGTTTCGCGTGATTTA
ATTGTCAAGAAAACATTGTCAAGGAAAAACACGATTTTGACACAATATTC
AAGTAGTCCATTTACGCCACATGTTACGCCATGTGACATACCTGCCCTAA
CAACTTTGCTTTCAAGATGGTTGAAGAGGCGGCATAATTGAGACCAAGAA
TGTCACCAACCCACTTTCGTCCCTGATCGGATGAACGCAAAAGATGAAAA
GGGACTGTTCAAACAGAGATATCTCTGGAACTAACACAAACGACACAATT
TTTTCTATGCTTGAGCCACCAAACGTCAGCTTAGCAGCTGTCTCACTTCA
CTGGGAAGTTTGTTTTGATGTGGTGATTTCCATACTTCAATGTCTACTCA
CCTGATAAGCTGTGCAAATACTGTATTTCAGCATGAAGAACCTCGCAGCC
TTAGTGATCGTCCTTACTGTAGCCCTGCTGGCAGACGTTGGACATGGATG
GCGACGACGTCGTACGTACATAGATTAGAGATCGTTTCGTGTCACTGACA
GAGATATTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTG
TGTGTGTGTGTTTGTGTCTTTGTGAGTGTGTACGTGGCTTAACTCGAATA
TCACCGTGTGTTACTACCTGATCTCACCGTGGAAGAATTCATAGCTATTT
GACTAGTGGTGTGCTTTTCACCAAGGTGGGGGAATGAAGAGGCTAGAGGA
ATTGGACCAGGAATTAAAGGAGGACGTTAAGATGGTCCAGAAGGAGGCAG
CCTGGGAACTGGCGATGGAGGAGCTGGACAATCTGGCCGAGATATTGAAG
GGAAAATCTGAAGGTCAACTTCAAGATGATGCAGGTACATCATTAACTAT
TGATAAATGAATGTCATACTGAATGGAAATTTTTCACACTTCCCAATTGT
AATTTGAGTCATAATTCAATGCTTCGCCAATTTAAAGTTAGCGCTGTCTT
TATCTTAGGCTCATTCCAGAAGAAGGAGGAATCTGGGCTGCAGATTGATG
GAGAAGCTGCAGAGATGAAGGAGACCGGGGGAGGTCTGGAGGAGGACGAG
ACCGATGGAGGTCTGATGGAGGGGGAGCAGACCGGTGGAGGTCTGGAGAT
GGAGGGGGAGAACGATGGAGGTCTGGAGGAAGAGAACGATGGAGGTCTTG
TGATGGAGGAGTTAAAGGAACTGGAGGAAGAGCTGGAAGTTCTGGAGGAA
GATCTTCAGAAGGGGAAGTAGGTAAGACTACTGTACATGAAGGATATCAC
GTCAGAAAAGGTCAACATAGTTCTAATGCATTGTTTTTGACAATTAACTT
GCGGAAAACTATGTGAAAAAGGGAATAGTGTAAACTTACCTGTTCATTTT
CTTTCAGACGGACAGATGTGCTGGATGACTTCACATCCCAAGGCAACCCT
TGA Coding sequence (CDS) from alignment at Sc0000002:5669907..5677009+ >transcript:BL95046_evm2 ID=transcript:BL95046_evm2|Name=transcript:BL95046_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=2745bp|location=Sequence derived from alignment at Sc0000002:5669907..5677009+ (Branchiostoma lanceolatum)
ATGAAGACCCTTGCAGTTTTAGTGATGGTCCTTTCGGTCGCCCTGCTGGT
CGATGTTGGAGAAGGATGGTTCTGGCGACGACGACGACACCGCACAGGAA
AGAGGTTAGGGGTCTTAGAGAAAGTACAGGAAGACGTTAAGAAGGTTGAG
GGGGAGGCAGCCTGGGAACTGGCGATGGAGGAGCTGGACAATCTGGCCGA
GATATTGAAGGGAAAATCTGAAGGTCAACTTCAAGATGATGCAGGCTCAT
TCCAGAAGAAGGAGGAATCTGGGCTGCAGATTGATGGAGAAGCTGCAGAG
ATGAAGGAGACCGGGGGAGGTCTGGAGGAGGACGAGACCGATGGAGGTCT
GATGGAGGGGGAGCAGACCGGTGGAGGTCTGGAGATGGAGGGGGAGAACG
ATGGAGGTCTGGAGGAAGAGAACGATGGAGGTCTTGTGATGGAGGAGTTA
AAGGAACTGGAGGAAGAGCTGGAAGTTCTGGAGGAAGATCTTCAGAAGGG
GAAACGGACAGATGTGCTGGATGACTTCACATCCCAAGGCAACCCTTGAA
TGAAGACCCTTGCAGTTTTAGTGATGGTCCTTTCGGTCGCCCTGCTGGTC
GATGTTGGAGAAGGATGGTTCTGGCGACGACGACGACACCGCACAGGAAA
GAGGTTAGGGGTCTTAGAGAAAGTACAGGAAGACGTTAAGAAGGTTGAGG
GGGAGGCAGCCTGGGAACTGGCGATGGAGGAGCTGGACAATCTGGCCGAG
ATATTGAAGGGAAAATCTGAAGGTCAACTTCAAGATGATGCAGGCTCATT
CCAGAAGAAGGAGGAATCTGGGCTGCAGATTGATGGAGAAGCTGCAGAGA
TGAAGGAGACCGGGGGAGGTCTGGAGGAGGACGAGACCGATGGAGGTCTG
ATGGAGGGGGAGCAGACCGGTGGAGGTCTGGAGATGGAGGGGGAGAACGA
TGGAGGTCTGGAGGAAGAGAACGATGGAGGTCTTGTGATGGAGGAGTTAA
AGGAACTGGAGGAAGAGCTGGAAGTTCTGGAGGAAGATCTTCAGAAGGGG
AAACGGACAGATGTGCTGGATGACTTCACATCCCAAGGCAACCCTTGAAT
GAAGACCCTTGCAGTTTTAGTGATGGTCCTTTCGGTCGCCCTGCTGGTCG
ATGTTGGAGAAGGATGGTTCTGGCGACGACGACGACACCGCACAGGAAAG
AGGTTAGGGGTCTTAGAGAAAGTACAGGAAGACGTTAAGAAGGTTGAGGG
GGAGGCAGCCTGGGAACTGGCGATGGAGGAGCTGGACAATCTGGCCGAGA
TATTGAAGGGAAAATCTGAAGGTCAACTTCAAGATGATGCAGGCTCATTC
CAGAAGAAGGAGGAATCTGGGCTGCAGATTGATGGAGAAGCTGCAGAGAT
GAAGGAGACCGGGGGAGGTCTGGAGGAGGACGAGACCGATGGAGGTCTGA
TGGAGGGGGAGCAGACCGGTGGAGGTCTGGAGATGGAGGGGGAGAACGAT
GGAGGTCTGGAGGAAGAGAACGATGGAGGTCTTGTGATGGAGGAGTTAAA
GGAACTGGAGGAAGAGCTGGAAGTTCTGGAGGAAGATCTTCAGAAGGGGA
AACGGACAGATGTGCTGGATGACTTCACATCCCAAGGCAACCCTTGAATG
AAGACCCTTGCAGTTTTAGTGATGGTCCTTTCGGTCGCCCTGCTGGTCGA
TGTTGGAGAAGGATGGTTCTGGCGACGACGACGACACCGCACAGGAAAGA
GGTTAGGGGTCTTAGAGAAAGTACAGGAAGACGTTAAGAAGGTTGAGGGG
GAGGCAGCCTGGGAACTGGCGATGGAGGAGCTGGACAATCTGGCCGAGAT
ATTGAAGGGAAAATCTGAAGGTCAACTTCAAGATGATGCAGGCTCATTCC
AGAAGAAGGAGGAATCTGGGCTGCAGATTGATGGAGAAGCTGCAGAGATG
AAGGAGACCGGGGGAGGTCTGGAGGAGGACGAGACCGATGGAGGTCTGAT
GGAGGGGGAGCAGACCGGTGGAGGTCTGGAGATGGAGGGGGAGAACGATG
GAGGTCTGGAGGAAGAGAACGATGGAGGTCTTGTGATGGAGGAGTTAAAG
GAACTGGAGGAAGAGCTGGAAGTTCTGGAGGAAGATCTTCAGAAGGGGAA
ACGGACAGATGTGCTGGATGACTTCACATCCCAAGGCAACCCTTGAATGA
AGACCCTTGCAGTTTTAGTGATGGTCCTTTCGGTCGCCCTGCTGGTCGAT
GTTGGAGAAGGATGGTTCTGGCGACGACGACGACACCGCACAGGAAAGAG
GTTAGGGGTCTTAGAGAAAGTACAGGAAGACGTTAAGAAGGTTGAGGGGG
AGGCAGCCTGGGAACTGGCGATGGAGGAGCTGGACAATCTGGCCGAGATA
TTGAAGGGAAAATCTGAAGGTCAACTTCAAGATGATGCAGGCTCATTCCA
GAAGAAGGAGGAATCTGGGCTGCAGATTGATGGAGAAGCTGCAGAGATGA
AGGAGACCGGGGGAGGTCTGGAGGAGGACGAGACCGATGGAGGTCTGATG
GAGGGGGAGCAGACCGGTGGAGGTCTGGAGATGGAGGGGGAGAACGATGG
AGGTCTGGAGGAAGAGAACGATGGAGGTCTTGTGATGGAGGAGTTAAAGG
AACTGGAGGAAGAGCTGGAAGTTCTGGAGGAAGATCTTCAGAAGGGGAAA
CGGACAGATGTGCTGGATGACTTCACATCCCAAGGCAACCCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:5669907..5677009 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95046_evm2 |
| Biotype | protein_coding |
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