transcript:BL95032_evm1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95032_evm1
Unique Nametranscript:BL95032_evm1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95032_evm1

>transcript:BL95032_evm1-protein ID=transcript:BL95032_evm1-protein|Name=transcript:BL95032_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=138bp
MFQLTLLLVAVTVAAAADTTRPTTTGPTTTFRPTTGYVPGCESQFSWPMQ
HALGESWHEQFEGFCQDCVCLATGKVCEPCPPRGCYRPFEILAQYGHELA
AGESAIIELRPGSGQCVLCHCQNYFAQCNDFPCDGIIA
Run BLAST on NCBI

mRNA from alignment at Sc0000001:8699247..8700324-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95032_evm1 ID=transcript:BL95032_evm1|Name=transcript:BL95032_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1078bp|location=Sequence derived from alignment at Sc0000001:8699247..8700324- (Branchiostoma lanceolatum)
ATGTTCCAGTTGACACTACTGCTTGTAGCGGTGACGGTTGCTGCCGCTGC CGACACAACCCGGCCAACAACAACCGGACCGACAACAACCTTCAGACCAA CCACTGGATACGTTCCGGTAAGTCTTTCTGAATGATTTCAGAGATAAACA AAATTGAGAGGATGGGGCGTAAGTGGCGCAAGGATATGACGATGTGAAAT TAGGCTATCGTTGGATCCAAGATTTGAAAGAAACTCGTATATGTTGATCA TGATTGGCTGTTTCTAGAAGTCAAGTTTTATTACCATATGGACAGACAGT TCGGGCCATCCGAAAGCAACAGTTATCTTCTCATGATTTGCGCCATAAAC AACAACAACAATAAAACTGCAACAGTGGTATGCAGGATATCTATCACTGA ATCTTTGAAAAGTGAAATACCGTCCGGGATAAATAAAAGCACGTGAATAC AGACATATACATGTAGAGTTATGATGGCTACAATAGTGACGTAACATCCC TTCAGTAGATATTCAATCAACGTTTTAACATGTCTATACATCTGTCATTA TCTGTACATGTACAGGGATGCGAGAGCCAGTTTTCCTGGCCGATGCAGCA CGCGCTGGGGGAATCTTGGCACGAGCAGTTCGAAGGGTTCTGTCAGGACT GCGTCTGTCTGGCGACTGGGAAGGTTTGCGAGCCTTGTCCACCCAGAGGT ATGTGAGTGTGTTGTGTGTGTTTGTATACTAGTACGTATGTCTCTCTCTC TCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGCGCGTGCGTGCGTGTGCGCTGTTGCCATACTCTTCA TATGATATCATTAAACGTTATGTACATCACTTGATTGATCTGATTTTATT GTTTATTTTAGGCTGCTACAGACCATTTGAAATACTGGCGCAATATGGGC ACGAGCTGGCTGCAGGCGAGTCAGCCATCATAGAGCTGCGTCCGGGATCC GGACAGTGCGTGCTGTGCCACTGCCAGAACTACTTTGCTCAGTGCAACGA CTTCCCTTGCGACGGCATCATAGCTTAA

Coding sequence (CDS) from alignment at Sc0000001:8699247..8700324-

>transcript:BL95032_evm1 ID=transcript:BL95032_evm1|Name=transcript:BL95032_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1251bp|location=Sequence derived from alignment at Sc0000001:8699247..8700324- (Branchiostoma lanceolatum)
ATGTTCCAGTTGACACTACTGCTTGTAGCGGTGACGGTTGCTGCCGCTGC
CGACACAACCCGGCCAACAACAACCGGACCGACAACAACCTTCAGACCAA
CCACTGGATACGTTCCGGGATGCGAGAGCCAGTTTTCCTGGCCGATGCAG
CACGCGCTGGGGGAATCTTGGCACGAGCAGTTCGAAGGGTTCTGTCAGGA
CTGCGTCTGTCTGGCGACTGGGAAGGTTTGCGAGCCTTGTCCACCCAGAG
GCTGCTACAGACCATTTGAAATACTGGCGCAATATGGGCACGAGCTGGCT
GCAGGCGAGTCAGCCATCATAGAGCTGCGTCCGGGATCCGGACAGTGCGT
GCTGTGCCACTGCCAGAACTACTTTGCTCAGTGCAACGACTTCCCTTGCG
ACGGCATCATAGCTTAAATGTTCCAGTTGACACTACTGCTTGTAGCGGTG
ACGGTTGCTGCCGCTGCCGACACAACCCGGCCAACAACAACCGGACCGAC
AACAACCTTCAGACCAACCACTGGATACGTTCCGGGATGCGAGAGCCAGT
TTTCCTGGCCGATGCAGCACGCGCTGGGGGAATCTTGGCACGAGCAGTTC
GAAGGGTTCTGTCAGGACTGCGTCTGTCTGGCGACTGGGAAGGTTTGCGA
GCCTTGTCCACCCAGAGGCTGCTACAGACCATTTGAAATACTGGCGCAAT
ATGGGCACGAGCTGGCTGCAGGCGAGTCAGCCATCATAGAGCTGCGTCCG
GGATCCGGACAGTGCGTGCTGTGCCACTGCCAGAACTACTTTGCTCAGTG
CAACGACTTCCCTTGCGACGGCATCATAGCTTAAATGTTCCAGTTGACAC
TACTGCTTGTAGCGGTGACGGTTGCTGCCGCTGCCGACACAACCCGGCCA
ACAACAACCGGACCGACAACAACCTTCAGACCAACCACTGGATACGTTCC
GGGATGCGAGAGCCAGTTTTCCTGGCCGATGCAGCACGCGCTGGGGGAAT
CTTGGCACGAGCAGTTCGAAGGGTTCTGTCAGGACTGCGTCTGTCTGGCG
ACTGGGAAGGTTTGCGAGCCTTGTCCACCCAGAGGCTGCTACAGACCATT
TGAAATACTGGCGCAATATGGGCACGAGCTGGCTGCAGGCGAGTCAGCCA
TCATAGAGCTGCGTCCGGGATCCGGACAGTGCGTGCTGTGCCACTGCCAG
AACTACTTTGCTCAGTGCAACGACTTCCCTTGCGACGGCATCATAGCTTA
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95032gene:BL95032Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95032_evm1-E1BL95032_evm1-E1-1564476830-30295Branchiostoma lanceolatumexon
BL95032_evm1-E2BL95032_evm1-E2-1564476830-30293Branchiostoma lanceolatumexon
BL95032_evm1-E3BL95032_evm1-E3-1564476830-30291Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95032_evm1transcript:BL95032_evm1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000001genomeSc0000001:8699247..8700324 -
Properties
Property NameValue
Transcript idBL95032_evm1
Biotypeprotein_coding