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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95028_evm0 >transcript:BL95028_evm0-protein ID=transcript:BL95028_evm0-protein|Name=transcript:BL95028_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=142bp
MPFPVEKSCGSWKHNANSDNYQQIMEKLGVPAEMFKALQESTFPVNASLS
GDKYTAKVEFMGKVHEDTFTLGVEGEEDDPTVGRKRKVTYTIEGDNLVSV
YPDHDGSGTSIRVSRHFVDDDTLHTDIKVGDDLEGWVTTKRC Run BLAST on NCBI mRNA from alignment at Sc0000001:7924262..7930105- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95028_evm0 ID=transcript:BL95028_evm0|Name=transcript:BL95028_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=5844bp|location=Sequence derived from alignment at Sc0000001:7924262..7930105- (Branchiostoma lanceolatum)
ATGCCTTTTCCTGTGGAGAAATCCTGCGGATCATGGAAGCACAACGCCAA
CTCCGACAACTACCAACAGATCATGGAGAAACTTGGTACGTGTGCATTTC
TATATATGAAGTTGATTTCTGGTTACGAAAGGCTGCTTCATGGACTAGAC
CACCGATGTCGTTAAAAAAAAACACGCTCAAAATTCTACCTGGGAATGCA
TCCTAAAGTGAGGGTCAAGTACTAAAAATCATACTCTCCCTGTTGAAATC
ACTGTTGATTTGTTTGCTTAACAATCCATGTGCTCGCTGCACTGAAACAC
ACTGTATCCTCAGATTTTTGTTGGCGATTTCACCCCCCCCCCCTCTGGAC
TTTTCGGGAATAGCGAATAACTAGTGACATATTGATTAGCCGTAATCTGT
ATACTCTAAATTCATTCATGCTCGCGGGACTTGATTTCACGGCAGGAGGC
GAAAGGCGATTTTCGCGATGTTTGAAGTTTGCGGTTGAAACAGGTACAGT
AGTGAGACAATGGGAACAATCTATCGCTGATATTAGGCTCTTTTTCCTTT
GGATACTTCTACTGTACAATAGTGACACAAATTTTGTTGGGTCTTTGGAG
AAAAAGCGCTGTTTCAAGTAGGATGCTGTTAGAAGCTATGGCCTACTAGT
ATATCAGTAGTACAATACGATTGTTGCAGGCATTGCAAGGTCACGGACAA
AATAGTAAAGAAGTGATCATGACTGGCCTACATGTCACTGGGTTCAGGAT
TTGCAAACCAGACGCAACTTGAAGTACCTGATGCAGCGAAAAAAGGTGCA
CATGTGTGTCATGGTCTTTAGATGTATCAAACAAATCTTACCCAACGAAC
TTAAAGACAATGACCCTAATCGTTTCACGTCCTCTTCACCGTGACATGTG
CTGGTGTGTTGTATCCTTGCAGGCGTCCCAGCCGAGATGTTTAAAGCGTT
ACAGGAGTCGACGTTCCCCGTCAATGCTTCTCTGTCAGGGGACAAGTACA
CGGCTAAGGTGGAGTTCATGGGAAAAGTACATGAGGACACTTTCACCTTG
GGAGTGGAGGGCGAGGAAGACGACCCAACTGTTGGCAGGAAGAGAAAGGT
GAGGAACAGATTCTAAGTCGATAATAGAAGGTTTCTGTGTCGTGACATTC
ATGGAAAGACACCTGTGTACAAACTTTTAGTTTATAGTAAACCAGGTGGC
TATCGCTTTGTCCAGGATTACATTTGTTTACACTTGTAACTGCCTTCTTG
AAGGACGTTCACCTCCGGCGGCCCGTGGGGGTATTGTTTTTGGTTGTCTA
TGTGTGTTCGCACCTATAACTCATAGATCATTTTGATGGATTTGTATGAA
TTTTGGTGTGCGAGTACTCATTGCGGTAAACAAAACAGGACTTTTGGTCC
CCCTAGCAGTATTTTCAGGTACTGCAGCATTACAGGCAGACACCCCCTTC
CTGAAAGTACAGTGGTATAGTCCATGCACAGCTGGNGGCGATTTTGGTCC
CCCTAGCAGTATTTTCAGGTACTGCAGCATTACAGGCCGACACCCCCTTC
CTGAAAGTACAGTGGTATAGTCCATGCACAGCTGGTCAGCCGACCGCCAT
AGAATGACCCCTTATGATAATCATATGAAGTTGATTAAGGGAAGAAGGAA
GGGGAGAATCACTAACACCTGTGATAGCTAGGGCTACGAAAAAAAACTTA
ATATGTCACTGAGGAATGAGATCTTCGATTTCATCTTACTTGTGTTATTC
TATTCTTCAGGTAACGTACACCATAGAGGGAGACAACCTGGTGTCCGTGT
ACCCTGATCATGATGGGTCGGGAACTTCCATCCGCGTCAGCCGCCATTTT
GTTGATGACGACACCCTTCACACAGTGAGTGTTTTAAAGACTACAAGCGG
TTTAGCTCGGGCAGAGTTGTCACCTTCACAAATTTTAAAATTTTCAACGA
ACAAATGGATAATACAGATCATTTATTCCTTTATTTGTAGGATATCAAAG
TTGGTGATCTCGAAGGCTGGACAACCGCCAAGCGCTGCTAGACGTCCGAG
AGGATGTTGACCCCTGTGGACCAGACAAACCGCCAGTCGGCTTTGCTTAG
ATTTGTTTAGTGTTTTATTCTGAATAAAGCATAAGAGTATGTATCGCTAG
TTGTTACACGCTAATCGGCATTTTAATGGATAAAAATAACAACCGTAAAA
CGCACTAGCCTGGAGTCCAGCCTTCTTAGATTTATTCCGCTACCCAAGCT
CCGCACCCCGCCAAGAACTCCAGGCTCCAGGCTAAAAACGCACGTCTCAC
AGTCAGACTGCGGTGGAACCCCCGTGAAGCGCTAGCGTTACAAAACCTGG
TCTTCAGCACCAAGGACGTCGCCCACACCCGCACAGCCATGTTAGCATCT
TATCAGCGCCCCTAGCGGAACGCGACGACTTGTGCTATGAAATATTTCTT
AACATATAGATACTGTCGACAATGTAACGTTACAGGTGAATCACACATAC
ACCCTATGTACTCTTAGCGTATCACATATTAAACTGCTTACATCTTGCTT
CCAATGGTGTGTGCTTTGGTTATTTTGTTTTGCGACCCAACAACCCCAAA
AACTAGTGAATTGATTCTTACGATTTGTGTTTGTCAGCCTGAGTCAAACT
ATACAAAGAAAGACAAGGGCCAATCACAAAAAACACTCCTGCGATGTTTT
ACCTTTAACTTCACCGTTTACTTTTTATTTCAGAAGGTAAATTCTACAAA
ATCTTTAAACACAAAGATACTGATACTTCATGCTTAACAAACATCCCCTC
GCAAAAGTTATCATCAATAACCCCCCGAAAATGTTATCCTCATTAAACTC
GGTGTCATCACTGTCTTCTCCCCTTGTTACGTGCACTTGCCTGGGATTAA
TGAAACCACCTTAATTCAAAGCGCGGAAGATTTCATCAAAACAAAGAGGA
AGTCGTACGATTTACAAACCAAGGAGTATAGACCAAACTAATCCCATGAT
GAAACCAGTCCAGGCTTCACTGGCCAGAAGGCCATGGTTCACTTTGTGGT
GGACAATGCATTAGTACCAGCTAGCGATGTAGACAAAAACTGCACTAAAT
GCTTCATGAAGCAGAGTCAAGAAGGCTAGGTCGCGTTAGGACACAACAGA
ACAAACCATCTTAGTGTACAATTGGTGTTTCATTAAAACATAGGATTAGA
TATGATCCCTCGACATGAGTGGTAATCCTTAGAACAGTCACAGATGTTGA
TGTTGACCGCCTCTGTACAAGCGCACACCGTGCAGTGGGCACCGCCCGTT
GCACCTCCGGACCGTACGCGACATCTCAGAAAGCCATGGGTGAATACGAC
AGATACGAACCTTGATGCCAAATGGCATGGCTAACATGTTTACATTTCAG
GAAGCTTGGCAGTCCACGAAACCATAGTTTCTCCCCCGATCTGCCTTACT
GTCCCGGAAATTCTTCAGCACCAAGGGCAGCGGAAGGCGCCTGGTTCAAC
GTTACGTATTGGCTTAAACAAAATAAGCTTGAGTAAGTGTTTTTTGGCGA
AGCGTTAAGTATAGTTGTGAACAACATAGCAGCTGTAAAAAAACATCTTT
GTGTTACCGTGGACTCATGAATCATACGGTACAGAGGTGAAGCAGGCCAG
GCAGCACAGAGGAGTGTTGATACAGTTTATGTTGGGAACCCAATAAAGAG
ACAACGCAGCAGCGCCCTCTTGCGATTGAGTTTAGAAGCACAGTGTCAAC
TTGACGGCCTGTCAGCTTCATTAACGCTGGTCTACGTATCTCGGTCTACG
TTCCTATTTCTTACGGCTTTAGATAGATGACGAACACGTATTTTCCTACG
GGCCCTGATATATATGTCATTTCGCTACTAGGCTAGCTAAAATGCTTTTG
AGTCTGTTGAATTACGGCACAGTAACATCAAACGTAACATCCCCCTCGCC
AACGTCGATGGTATACCAATCCACGCCCCCAGTTGTCATGTGGACTTTGA
TGCTGACGTAGTGCATAACGAGTTTTGCGACGAGCTGGCACAATGTTGGT
CTTTCGTTTTTGAGTCAGCAAGTTCGGGAGTTCCATGGAGTTTCGAAGGA
TCCGGAGGTGATTTTTTTCGGAGAACAGACTAAAATCGATGCGCGCACTG
ATGTCATCCATAAAAGTAGGTTGGTGTGGTCTTTAGGACAAGAGGGTAGA
CGGAGAAGTTAATCATTACCATCCTTTTCGACCTAGCGGTCGTCTGTGCA
CGCATGTCCATATTTGGCGTGTTGGCCCATATTTTGATATCTCTCGATCA
CTACATAGTGCAACGCCAGCGTTTTCACACACCTGAGCACACCTACACCA
GACCAGACCTTCTTCACGTTCTCTCTCGCCTGAGAAGCCAAAAAGACCCA
ACAAGATGCCTTTTCCTGTGGAGAAATCTTGCGGTACATGGAAGCACGAC
AAACATTCTGACAACTACCAACAGATCATGGAGAAATTTGGTACGTGTTA
ACTTTTATGTATGAGGGGAGGGGCCACCAAATAAGGCTAGTGCCTGAAAA
TCACATAAGGAAAGGCTCCAAAATACACTTATCAGTATTGCAATGTCTTG
GAGACCTAAACATGTCTACTTACCAAATCTGGAAAAAGCCGAGCTTCGAC
TCCAGTTAAACTTTCCTGCTACTGCCCTTCGAACCAAAACACATGGTCTC
TAGATGTATTAAACAAATCTTGTCCAACGGAACAAAAGACACTGATCCTA
CAATCGTTTCAAGTCCTCTTCACTGTGACATGTGCTGGTGTGTTGTATCA
TTGCAGGAGTTCCAGCCGAGAAGTTTCAAAAGTTACAGACGGGGACTTTC
CCCGTCAGTGCTTCTCTGTCAGGGGACAAGTACACCTCTAAGGTGGAGCT
CATGGGGGAAGTACGTGAGAAGACTTTCACCTTGGGAGTGGAGAGCGATG
ACGACGATCGATTGTCTGGCAGGAAGAGAAAGGTGAGGAAAAGATTCTAA
GTCGATAATAGTAGGTTTCTGTATCGTGACATGGATGGAAAGACAAGAGT
GTGTACCACAGGATTTTAGTTTGTGGTAAGCCAGGTGGTCATCGCTTTGT
CTGGGATTACATTTGTTTACAGTTATACATGTAACTACCTTCTTGAAGGA
GGTTCACCCCCGACGGCCCGTGGGGGTATTGTTTTTGGTTGTCTATGTGT
GTTCGCACCTATAACTCATAGATCATTTTGATGGATTTGTATGAATTTTG
GTATGCGAGTACTTATTGACCCCTCCCCCCCCCAGGAAACATGGCGATTT
TGTCCCCCTAGCAGTATTTTCAGGTATTGTAGCATTACAGGCCGACACCC
CCTTTCTGAATGTAGAGTCCATGCACAGCTGGTCAGCCGACCGCCATAGA
ATGACGACGAATGACCCCGTATGAGGAAAGGAAGGCTCACTAACACATGT
GATGGGTAGGGCTACGGCATTAAAAAATTCACAAAAAAACCTCTTCATAT
GTCACTGAGGTCTGATATCTTCAATTTCTTTCTTACTTCCGTTATCCTAT
TCTTCAGGTGACTTACACCATAGAGGGAGACAACCTGGTGTCCGTGTTCC
CTGACCATGATGGGTCGGGAACTCCTGTGCGCGTCACCCGCCATTTTGTT
GATGACGACACCATCCGCACAGTGAGTGTTCTGTACACCTTTTCTATGAA
TTTAGCTCGGGTAGGGTTTTCAACTTCACAAATTTTGAAATTTTCAGCAA
ACACATGGCTACAATAGATCATTTATTCCTTTTTTTGTAGGATATCAAAG
TTGGTGATGATCTCGAGGGCTGGGTAACCACCAAGCGCTGCTAG Coding sequence (CDS) from alignment at Sc0000001:7924262..7930105- >transcript:BL95028_evm0 ID=transcript:BL95028_evm0|Name=transcript:BL95028_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1716bp|location=Sequence derived from alignment at Sc0000001:7924262..7930105- (Branchiostoma lanceolatum)
ATGCCTTTTCCTGTGGAGAAATCCTGCGGATCATGGAAGCACAACGCCAA
CTCCGACAACTACCAACAGATCATGGAGAAACTTGGCGTCCCAGCCGAGA
TGTTTAAAGCGTTACAGGAGTCGACGTTCCCCGTCAATGCTTCTCTGTCA
GGGGACAAGTACACGGCTAAGGTGGAGTTCATGGGAAAAGTACATGAGGA
CACTTTCACCTTGGGAGTGGAGGGCGAGGAAGACGACCCAACTGTTGGCA
GGAAGAGAAAGGTAACGTACACCATAGAGGGAGACAACCTGGTGTCCGTG
TACCCTGATCATGATGGGTCGGGAACTTCCATCCGCGTCAGCCGCCATTT
TGTTGATGACGACACCCTTCACACAGATATCAAAGTTGGTGATGATCTCG
AGGGCTGGGTAACCACCAAGCGCTGCTAGATGCCTTTTCCTGTGGAGAAA
TCCTGCGGATCATGGAAGCACAACGCCAACTCCGACAACTACCAACAGAT
CATGGAGAAACTTGGCGTCCCAGCCGAGATGTTTAAAGCGTTACAGGAGT
CGACGTTCCCCGTCAATGCTTCTCTGTCAGGGGACAAGTACACGGCTAAG
GTGGAGTTCATGGGAAAAGTACATGAGGACACTTTCACCTTGGGAGTGGA
GGGCGAGGAAGACGACCCAACTGTTGGCAGGAAGAGAAAGGTAACGTACA
CCATAGAGGGAGACAACCTGGTGTCCGTGTACCCTGATCATGATGGGTCG
GGAACTTCCATCCGCGTCAGCCGCCATTTTGTTGATGACGACACCCTTCA
CACAGATATCAAAGTTGGTGATGATCTCGAGGGCTGGGTAACCACCAAGC
GCTGCTAGATGCCTTTTCCTGTGGAGAAATCCTGCGGATCATGGAAGCAC
AACGCCAACTCCGACAACTACCAACAGATCATGGAGAAACTTGGCGTCCC
AGCCGAGATGTTTAAAGCGTTACAGGAGTCGACGTTCCCCGTCAATGCTT
CTCTGTCAGGGGACAAGTACACGGCTAAGGTGGAGTTCATGGGAAAAGTA
CATGAGGACACTTTCACCTTGGGAGTGGAGGGCGAGGAAGACGACCCAAC
TGTTGGCAGGAAGAGAAAGGTAACGTACACCATAGAGGGAGACAACCTGG
TGTCCGTGTACCCTGATCATGATGGGTCGGGAACTTCCATCCGCGTCAGC
CGCCATTTTGTTGATGACGACACCCTTCACACAGATATCAAAGTTGGTGA
TGATCTCGAGGGCTGGGTAACCACCAAGCGCTGCTAGATGCCTTTTCCTG
TGGAGAAATCCTGCGGATCATGGAAGCACAACGCCAACTCCGACAACTAC
CAACAGATCATGGAGAAACTTGGCGTCCCAGCCGAGATGTTTAAAGCGTT
ACAGGAGTCGACGTTCCCCGTCAATGCTTCTCTGTCAGGGGACAAGTACA
CGGCTAAGGTGGAGTTCATGGGAAAAGTACATGAGGACACTTTCACCTTG
GGAGTGGAGGGCGAGGAAGACGACCCAACTGTTGGCAGGAAGAGAAAGGT
AACGTACACCATAGAGGGAGACAACCTGGTGTCCGTGTACCCTGATCATG
ATGGGTCGGGAACTTCCATCCGCGTCAGCCGCCATTTTGTTGATGACGAC
ACCCTTCACACAGATATCAAAGTTGGTGATGATCTCGAGGGCTGGGTAAC
CACCAAGCGCTGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:7924262..7930105 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95028_evm0 |
| Biotype | protein_coding |
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