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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95022_evm1 >transcript:BL95022_evm1-protein ID=transcript:BL95022_evm1-protein|Name=transcript:BL95022_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=399bp
MAAILVTTYRYGRSRSVQTVWSRISHKVHNSHASTSFGTEVNLVETHVDW
ASRAKLHPARIRGRKWLPGSASPNYPEFLKPPRDGYPYVFTPDDNTTASP
EGCAVAVRKVVHEVLEKNKNGAVLFCGLPLQTAEDFSRVVNNMDLKLMRY
EGGGAVRSEIAKDVNTASDEPPKFCIEPHNELVYTSHFPEKVIFFCLDPP
SPGAGGETVIADVREILPRLDKDVVDKFEKLGVMYWHHLPSHTPGAYHSW
QKAFLTEDRAAVEKHMTANGTSWRWEDGNLSWWITLPSMFKYRGQKLWFC
GPVNHASHFKAHPLWFDKDLPDHHFPFTTYYGDGTDIKAEVLQHIRDVLW
QVSMGFQMQKGDLLVLNNMYCQHARLGFTGKRKLAVALTKQDQDYPEDY Run BLAST on NCBI mRNA from alignment at Sc0000001:6436565..6438806- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95022_evm1 ID=transcript:BL95022_evm1|Name=transcript:BL95022_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2242bp|location=Sequence derived from alignment at Sc0000001:6436565..6438806- (Branchiostoma lanceolatum)
ATGGCCGCCATACTAGTGACAACCTACAGGTATGGGCGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTCGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTACGTCTTCACACCCGACGATAACACAACCGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTACGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCAGTACTGTTTTGTGGTCTGCCCCTACAGACTGCCG
AAGATTTCTCCCGTGTAGTCAATAACATGGATCTGAAATTAATGCGTTAT
GAAGGGGGAGGGGCAGTCAGGAGTGAGATCGCAAAGGATGTGAACACAGC
GAGCGACGAGCCGCCCAAGTTTTGTATCGAGCCCCACAATGAGCTGGTAT
ACACTTCACACTTCCCTGAAAAGGTTAGTGAAGCGTAGAAAGAAAGCATA
ACCCATATAGGAGACTTTAACGTACAGCTAAACTAGCTTCCTACCCATTC
ACTACATGTGTTCTAAAATGGATGTAACCTATGTCAAGTATTAACCCAAA
AAGTTTGATTTGTGAAATTCACATCACGATTTTCAGGTCATATTTTTCTG
CCTGGACCCTCCGTCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACG
TGCGGGAAATCCTGCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAG
AAGCTCGGAGTGATGTACTGGCATCACCTGCCCTCCCATACTCCTGGAGC
ATACCACTCATGGCAAAAGGTACAATCTGTTTATTATTTGATTTTATTAA
ATCGCCGGCACAATGATCATCAAATCAAAAAGTGAAAGAATTTTTCCATA
ACACAGCCTCATTACTCTTAAGGGTACCTACTGGCTGATCTTCAAGGTGA
ATATTCAAGGTGAATATTCTGGACAGGTATCTAAACGCCATATACAGGCG
TTCCTGACCGAGGACAGAGCTGCTGTAGAGAAGCATATGACTGCGAATGG
TACCAGCTGGAGGTGGGAAGATGGCAACCTATCATGGTGGATCACACTGC
CGTCCATGTTTAAATACAGAGGTTAGGATTCACTCAATATACATGTATAT
ACATAAATGTAAATATATATATGTTTGGGATAGATTTTAACAGAGATGGA
AAAATCGACAATACACTTTGGAGGGACATATCTATCAATTATTCATGATA
GCACAATTTTGTATCGTTCATACCACGTACATTCAGTTTATAACGGACAC
ATCTAACCTTGGTGCCATTGTAATCTATTTTCCAGGACAGAAACTGTGGT
TTTGTGGACCTGTAAATCATGCATCACATTTCAAGGCCCACCCCCTCTGG
TTCGACAAGGATCTTCCTGATCATCACTTTCCTTTCACCACCTACTACGG
AGACGGCACCGACATTAAGGCGGAAGTTCTCCAGCATATCCGCGATGTTC
TCTGGCAGGTATGTAGGTACATGCATGTACCAGAGCCCAAAAGGACATTC
TTGCAGCCTTTGCGAAGCCCTCGTCGCAGGCTCTGCAATCTCTTTTTCGC
AGCCTCTGCAAAACAACAATTTCTCAGCCTCTGCGAAGCTCTTTTTAGAG
AGTGTCATTATGGGCTTCAGTACGTAGGATTGTTTCCTTGTTCTGGATCG
GCATTTTCCCGGTGACAAAGATAAAGATTCTAACTCTCTTCTTTCCAAGA
CCCATTCATATATTCATTAACAATCTCATCTACGCAAATAGCCAGAAAGA
TCAGGAATAATTTGATAATTCAACTTCTGAGACGACCTTAGTTGGTTTCT
ATTAGCCATTAATGTTTTGCAGAGCGTATGTTCGAGAGAACCTTGTGGGC
ATCACCAAAACGTTCAGGGTCTGCATTCTGTATAGACACGATAGCATCCT
AGAAATTTTAATCTTCACGGGAGTATGACGTTTTCCTGTTGACAGGTCTC
CATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGTCCTGAACAACATGT
ACTGCCAACACGCCAGACTCGGCTTTACCGGGAAACGGAAGCTTGCCGTC
GCGCTGACCAAGCAGGACCAGGACTATCCGGAGGATTACTGA Coding sequence (CDS) from alignment at Sc0000001:6436565..6438806- >transcript:BL95022_evm1 ID=transcript:BL95022_evm1|Name=transcript:BL95022_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=6000bp|location=Sequence derived from alignment at Sc0000001:6436565..6438806- (Branchiostoma lanceolatum)
ATGGCCGCCATACTAGTGACAACCTACAGGTATGGGCGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTCGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTACGTCTTCACACCCGACGATAACACAACCGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTACGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCAGTACTGTTTTGTGGTCTGCCCCTACAGACTGCCG
AAGATTTCTCCCGTGTAGTCAATAACATGGATCTGAAATTAATGCGTTAT
GAAGGGGGAGGGGCAGTCAGGAGTGAGATCGCAAAGGATGTGAACACAGC
GAGCGACGAGCCGCCCAAGTTTTGTATCGAGCCCCACAATGAGCTGGTAT
ACACTTCACACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCCG
TCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCCT
GCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGA
TGTACTGGCATCACCTGCCCTCCCATACTCCTGGAGCATACCACTCATGG
CAAAAGGCGTTCCTGACCGAGGACAGAGCTGCTGTAGAGAAGCATATGAC
TGCGAATGGTACCAGCTGGAGGTGGGAAGATGGCAACCTATCATGGTGGA
TCACACTGCCGTCCATGTTTAAATACAGAGGACAGAAACTGTGGTTTTGT
GGACCTGTAAATCATGCATCACATTTCAAGGCCCACCCCCTCTGGTTCGA
CAAGGATCTTCCTGATCATCACTTTCCTTTCACCACCTACTACGGAGACG
GCACCGACATTAAGGCGGAAGTTCTCCAGCATATCCGCGATGTTCTCTGG
CAGGTCTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGTCCTGAA
CAACATGTACTGCCAACACGCCAGACTCGGCTTTACCGGGAAACGGAAGC
TTGCCGTCGCGCTGACCAAGCAGGACCAGGACTATCCGGAGGATTACTGA
ATGGCCGCCATACTAGTGACAACCTACAGGTATGGGCGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTCGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTACGTCTTCACACCCGACGATAACACAACCGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTACGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCAGTACTGTTTTGTGGTCTGCCCCTACAGACTGCCG
AAGATTTCTCCCGTGTAGTCAATAACATGGATCTGAAATTAATGCGTTAT
GAAGGGGGAGGGGCAGTCAGGAGTGAGATCGCAAAGGATGTGAACACAGC
GAGCGACGAGCCGCCCAAGTTTTGTATCGAGCCCCACAATGAGCTGGTAT
ACACTTCACACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCCG
TCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCCT
GCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGA
TGTACTGGCATCACCTGCCCTCCCATACTCCTGGAGCATACCACTCATGG
CAAAAGGCGTTCCTGACCGAGGACAGAGCTGCTGTAGAGAAGCATATGAC
TGCGAATGGTACCAGCTGGAGGTGGGAAGATGGCAACCTATCATGGTGGA
TCACACTGCCGTCCATGTTTAAATACAGAGGACAGAAACTGTGGTTTTGT
GGACCTGTAAATCATGCATCACATTTCAAGGCCCACCCCCTCTGGTTCGA
CAAGGATCTTCCTGATCATCACTTTCCTTTCACCACCTACTACGGAGACG
GCACCGACATTAAGGCGGAAGTTCTCCAGCATATCCGCGATGTTCTCTGG
CAGGTCTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGTCCTGAA
CAACATGTACTGCCAACACGCCAGACTCGGCTTTACCGGGAAACGGAAGC
TTGCCGTCGCGCTGACCAAGCAGGACCAGGACTATCCGGAGGATTACTGA
ATGGCCGCCATACTAGTGACAACCTACAGGTATGGGCGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTCGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTACGTCTTCACACCCGACGATAACACAACCGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTACGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCAGTACTGTTTTGTGGTCTGCCCCTACAGACTGCCG
AAGATTTCTCCCGTGTAGTCAATAACATGGATCTGAAATTAATGCGTTAT
GAAGGGGGAGGGGCAGTCAGGAGTGAGATCGCAAAGGATGTGAACACAGC
GAGCGACGAGCCGCCCAAGTTTTGTATCGAGCCCCACAATGAGCTGGTAT
ACACTTCACACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCCG
TCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCCT
GCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGA
TGTACTGGCATCACCTGCCCTCCCATACTCCTGGAGCATACCACTCATGG
CAAAAGGCGTTCCTGACCGAGGACAGAGCTGCTGTAGAGAAGCATATGAC
TGCGAATGGTACCAGCTGGAGGTGGGAAGATGGCAACCTATCATGGTGGA
TCACACTGCCGTCCATGTTTAAATACAGAGGACAGAAACTGTGGTTTTGT
GGACCTGTAAATCATGCATCACATTTCAAGGCCCACCCCCTCTGGTTCGA
CAAGGATCTTCCTGATCATCACTTTCCTTTCACCACCTACTACGGAGACG
GCACCGACATTAAGGCGGAAGTTCTCCAGCATATCCGCGATGTTCTCTGG
CAGGTCTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGTCCTGAA
CAACATGTACTGCCAACACGCCAGACTCGGCTTTACCGGGAAACGGAAGC
TTGCCGTCGCGCTGACCAAGCAGGACCAGGACTATCCGGAGGATTACTGA
ATGGCCGCCATACTAGTGACAACCTACAGGTATGGGCGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTCGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTACGTCTTCACACCCGACGATAACACAACCGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTACGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCAGTACTGTTTTGTGGTCTGCCCCTACAGACTGCCG
AAGATTTCTCCCGTGTAGTCAATAACATGGATCTGAAATTAATGCGTTAT
GAAGGGGGAGGGGCAGTCAGGAGTGAGATCGCAAAGGATGTGAACACAGC
GAGCGACGAGCCGCCCAAGTTTTGTATCGAGCCCCACAATGAGCTGGTAT
ACACTTCACACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCCG
TCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCCT
GCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGA
TGTACTGGCATCACCTGCCCTCCCATACTCCTGGAGCATACCACTCATGG
CAAAAGGCGTTCCTGACCGAGGACAGAGCTGCTGTAGAGAAGCATATGAC
TGCGAATGGTACCAGCTGGAGGTGGGAAGATGGCAACCTATCATGGTGGA
TCACACTGCCGTCCATGTTTAAATACAGAGGACAGAAACTGTGGTTTTGT
GGACCTGTAAATCATGCATCACATTTCAAGGCCCACCCCCTCTGGTTCGA
CAAGGATCTTCCTGATCATCACTTTCCTTTCACCACCTACTACGGAGACG
GCACCGACATTAAGGCGGAAGTTCTCCAGCATATCCGCGATGTTCTCTGG
CAGGTCTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGTCCTGAA
CAACATGTACTGCCAACACGCCAGACTCGGCTTTACCGGGAAACGGAAGC
TTGCCGTCGCGCTGACCAAGCAGGACCAGGACTATCCGGAGGATTACTGA
ATGGCCGCCATACTAGTGACAACCTACAGGTATGGGCGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTCGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTACGTCTTCACACCCGACGATAACACAACCGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTACGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCAGTACTGTTTTGTGGTCTGCCCCTACAGACTGCCG
AAGATTTCTCCCGTGTAGTCAATAACATGGATCTGAAATTAATGCGTTAT
GAAGGGGGAGGGGCAGTCAGGAGTGAGATCGCAAAGGATGTGAACACAGC
GAGCGACGAGCCGCCCAAGTTTTGTATCGAGCCCCACAATGAGCTGGTAT
ACACTTCACACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCCG
TCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCCT
GCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGA
TGTACTGGCATCACCTGCCCTCCCATACTCCTGGAGCATACCACTCATGG
CAAAAGGCGTTCCTGACCGAGGACAGAGCTGCTGTAGAGAAGCATATGAC
TGCGAATGGTACCAGCTGGAGGTGGGAAGATGGCAACCTATCATGGTGGA
TCACACTGCCGTCCATGTTTAAATACAGAGGACAGAAACTGTGGTTTTGT
GGACCTGTAAATCATGCATCACATTTCAAGGCCCACCCCCTCTGGTTCGA
CAAGGATCTTCCTGATCATCACTTTCCTTTCACCACCTACTACGGAGACG
GCACCGACATTAAGGCGGAAGTTCTCCAGCATATCCGCGATGTTCTCTGG
CAGGTCTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGTCCTGAA
CAACATGTACTGCCAACACGCCAGACTCGGCTTTACCGGGAAACGGAAGC
TTGCCGTCGCGCTGACCAAGCAGGACCAGGACTATCCGGAGGATTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:6436565..6438806 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95022_evm1 |
| Biotype | protein_coding |
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