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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95021_evm0 >transcript:BL95021_evm0-protein ID=transcript:BL95021_evm0-protein|Name=transcript:BL95021_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=400bp
MAVILPTAYRSVWSRSVQTVWSRISHKVHNSHASTSFGTEVNLVETHVDW
ASRAKLHPARIRGRKWLPGSASPNYPEFLKPPRDGYPSVFTPEDDTTASP
EGCAVAVRKVVHEVLEKNKNGAVLFRGLPLQTAEDFSRVVNNMGLKLIGY
EGGAAVRSDIAKAVNTASDEPPEFCIEPHNELAQTSHFPEKVIFFCLDPP
SPGAGGETVIADVREILPRLDKDVVDKFEKLGVMYWYRLPTHSPEAYLSW
QKSFQTEERAAVEKYMIANNTNWRWEDDNLSWCITLPPMFKYRGQKLWFC
SVHINNASYFKAHPLWFNKDLPDHDFPLTTHYGDGTDIEAEVIQHIRDVH
WQVSMGFQMQKGDLLVLNNMYCQHARLGFTGKRKLAVALAKQEQDYSEYY Run BLAST on NCBI mRNA from alignment at Sc0000001:6432233..6435206- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95021_evm0 ID=transcript:BL95021_evm0|Name=transcript:BL95021_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2974bp|location=Sequence derived from alignment at Sc0000001:6432233..6435206- (Branchiostoma lanceolatum)
ATGGCCGTCATACTACCGACAGCCTACAGAAGTGTGTGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTGGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGAAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTCTGTCTTCACACCCGAGGATGACACAACAGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCTCTGCAGACTGCCG
AAGATTTCTCCCGTGTAGTCAATAACATGGGTCTGAAGTTAATTGGTTAT
GAAGGGGGAGCTGCAGTCAGGAGTGACATCGCGAAGGCAGTGAACACAGC
GAGCGACGAGCCGCCCGAGTTTTGTATCGAACCCCACAATGAGCTGGCCC
AGACCTCGCACTTCCCTGAAAAGGTTAGTAGAACGAAAAGTGTCAACGCT
TTAGAGAACAGCTAACGCAAACCGAGTCTCCGTAGGTGTCCTTGGTTTTA
CGTCTCATTCGCTTTTTGTATGATAGGCTTCTTTTTGATTCTTTTTTGCT
ATTGATTCACCACATGTCTTCTGAAATTGACATTAGGTATGCCACTTAAC
AAAAAGATTTGGTTGTGGTTTTCAGGTCATATTTTTCTGCCTGGACCCTC
CGTCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGATGTGCGGGAAATT
CTGCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGTGT
GATGTACTGGTATCGCCTGCCCACCCATTCTCCTGAAGCATACCTCTCAT
GGCAAAAGGTACAACTAATAGCTAATTATTTGATTCTTTAGATCACCGAA
ACGAAGAACATCAAACCAAGAAGAGAATTACACCTTCTCTTCCATAGACA
ACAAGAGTCTTAGGACCCGAAATCTCGATGAAACTTTGTTTTTTTATTAA
ACCAGTTCCCCCCCCATTCTATATCCCTCAATGGTATGAACCCCACCTGT
CGGGCCCAGGAGAAGTGACCCACTTTCGCTATAAATAGCTACTATCAGAT
GTGCCACAATATGCAATGGACAACACTGCAAATATAGATTTTCCTCATTA
CTTATGCAAATTAAGTCCAATTTGCAGTTCATTGTATACATCTGTGTCTA
AGCTATCTGCATAGTAAATAACATGAAAATCTGTCGTTCCTTTCTTCAGT
TATTCTCCTTCGAAGATTTTTACAAATACGCCATTGCAGTTCCAGTGACA
CATACCAGGGGGCCCAAAATCGACCTTGACCTTTCTCCTCCCAACACCTA
CCCACATATCAAATATCATTACAATCCATCAACACGTTCTACAGTTATTC
TGACATTAAGCATCCGGTGACACAAACATACACACAAACACGCAAACGCA
CGCAAAACAGTATCTCCATGAAAAAGCCTTTTTTCAAGGAGATAAACATA
CATGTATTTTTCATATGTATCTATACGGTATACATCTTCAGTCGTTCCAG
ACCGAGGAAAGGGCGGCTGTAGAGAAGTATATGATAGCGAACAACACAAA
CTGGAGGTGGGAAGATGACAACCTATCATGGTGCATCACACTGCCACCCA
TGTTCAAGTACAGAGGTTAGCATATTTCAATAAAGTCAGTGTATGTGTGT
GTGTGTGTAAGTGGTGTTCGTGAGTATGTTGGGGGGGGGGGGGCTCTGTT
GTCAGGGCGGGGGGCTCTGTTGTCAGGACGGTCACTAGAGTTGTGGGCTT
ATCTTATATTGTCCTGGTATCTAGACCATACCTAAAACAAGGTCTCTCTG
AAAATTGAAATGCAGTGAAGAGAAAAACTTTGGGATTAAGGTTTGGGATG
GGTTTCGAAAAATGCGGAAAATAGTTCATGAAAGCTTTTTTTAATTTATT
TTAATTTCGAAGGATATAAAACAAGAGACTGTTAACGATAGAACCATTTT
GTGGCCTTTTATTCTGCTGTACATTGCACGGTAGAACAATTGGCTCAGCA
GCAATCTAGGAAACATGTACGTATATGTTAACAACGGTTCCAATGTAATT
TTCCAGGGCAGAAACTGTGGTTTTGCTCCGTCCACATAAATAACGCATCA
TATTTCAAGGCCCACCCCCTCTGGTTCAACAAGGATCTCCCCGATCATGA
CTTTCCCCTCACCACCCACTATGGAGACGGCACCGACATTGAGGCAGAAG
TAATTCAGCACATCCGCGATGTCCACTGGCAGGTACGTACATGTAGGTAC
GAAAGCCCATAAGGACACTTTGTGCAGCCTCTGAGAAACTCTTGGCAGTG
GCTTCCAATAGTGTCCTTGTGGACTTCAGTACGTGTAGTTAGTGTGGACT
CTTCCTCGTTCTGGACCACCATTTTCCGATTGGGAAACATGTGCTCAAAC
TCAAAATTTACTTTTTCTTCCCAGACTCGCAAAAACTCATAAATAGTCTT
ACCTCTACAGACAGCCAAACTAAATCATGATTAATTTGACAACTCAACCA
CAGATGACCTTTAAATCCAATTCAGTTGGCTCAGATTAGCCATGTATCCA
TCGCAGAGAGTATGCTTAATAGAACCTTGCTGACAGCATCATAACGTTAA
GTCCACATTCTTTACATCCACGATAGCATCCTAGAAATCGAAACTCAAAC
GAGTGTGTGGCATTTTTTTCCTAACAGGTTTCCATGGGTTTCCAGATGCA
GAAGGGTGACTTACTGGTCCTGAACAACATGTACTGCCAGCACGCCAGAC
TCGGCTTCACCGGGAAACGGAAGCTTGCCGTCGCGTTGGCCAAGCAGGAG
CAGGACTATTCGGAGTACTACTGA Coding sequence (CDS) from alignment at Sc0000001:6432233..6435206- >transcript:BL95021_evm0 ID=transcript:BL95021_evm0|Name=transcript:BL95021_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=6015bp|location=Sequence derived from alignment at Sc0000001:6432233..6435206- (Branchiostoma lanceolatum)
ATGGCCGTCATACTACCGACAGCCTACAGAAGTGTGTGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTGGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGAAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTCTGTCTTCACACCCGAGGATGACACAACAGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCTCTGCAGACTGCCG
AAGATTTCTCCCGTGTAGTCAATAACATGGGTCTGAAGTTAATTGGTTAT
GAAGGGGGAGCTGCAGTCAGGAGTGACATCGCGAAGGCAGTGAACACAGC
GAGCGACGAGCCGCCCGAGTTTTGTATCGAACCCCACAATGAGCTGGCCC
AGACCTCGCACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCCG
TCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGATGTGCGGGAAATTCT
GCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGTGTGA
TGTACTGGTATCGCCTGCCCACCCATTCTCCTGAAGCATACCTCTCATGG
CAAAAGTCGTTCCAGACCGAGGAAAGGGCGGCTGTAGAGAAGTATATGAT
AGCGAACAACACAAACTGGAGGTGGGAAGATGACAACCTATCATGGTGCA
TCACACTGCCACCCATGTTCAAGTACAGAGGGCAGAAACTGTGGTTTTGC
TCCGTCCACATAAATAACGCATCATATTTCAAGGCCCACCCCCTCTGGTT
CAACAAGGATCTCCCCGATCATGACTTTCCCCTCACCACCCACTATGGAG
ACGGCACCGACATTGAGGCAGAAGTAATTCAGCACATCCGCGATGTCCAC
TGGCAGGTTTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGTCCT
GAACAACATGTACTGCCAGCACGCCAGACTCGGCTTCACCGGGAAACGGA
AGCTTGCCGTCGCGTTGGCCAAGCAGGAGCAGGACTATTCGGAGTACTAC
TGAATGGCCGTCATACTACCGACAGCCTACAGAAGTGTGTGGTCACGCAG
TGTGCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACG
CATCAACGTCATTTGGCACCGAAGTCAACCTCGTGGAGACCCACGTTGAC
TGGGCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGAAGGAAGTG
GCTACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCA
GGGACGGCTACCCGTCTGTCTTCACACCCGAGGATGACACAACAGCCTCT
CCTGAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCTGGA
GAAGAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCTCTGCAGACTG
CCGAAGATTTCTCCCGTGTAGTCAATAACATGGGTCTGAAGTTAATTGGT
TATGAAGGGGGAGCTGCAGTCAGGAGTGACATCGCGAAGGCAGTGAACAC
AGCGAGCGACGAGCCGCCCGAGTTTTGTATCGAACCCCACAATGAGCTGG
CCCAGACCTCGCACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCT
CCGTCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGATGTGCGGGAAAT
TCTGCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGTG
TGATGTACTGGTATCGCCTGCCCACCCATTCTCCTGAAGCATACCTCTCA
TGGCAAAAGTCGTTCCAGACCGAGGAAAGGGCGGCTGTAGAGAAGTATAT
GATAGCGAACAACACAAACTGGAGGTGGGAAGATGACAACCTATCATGGT
GCATCACACTGCCACCCATGTTCAAGTACAGAGGGCAGAAACTGTGGTTT
TGCTCCGTCCACATAAATAACGCATCATATTTCAAGGCCCACCCCCTCTG
GTTCAACAAGGATCTCCCCGATCATGACTTTCCCCTCACCACCCACTATG
GAGACGGCACCGACATTGAGGCAGAAGTAATTCAGCACATCCGCGATGTC
CACTGGCAGGTTTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACTGGT
CCTGAACAACATGTACTGCCAGCACGCCAGACTCGGCTTCACCGGGAAAC
GGAAGCTTGCCGTCGCGTTGGCCAAGCAGGAGCAGGACTATTCGGAGTAC
TACTGAATGGCCGTCATACTACCGACAGCCTACAGAAGTGTGTGGTCACG
CAGTGTGCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTC
ACGCATCAACGTCATTTGGCACCGAAGTCAACCTCGTGGAGACCCACGTT
GACTGGGCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGAAGGAA
GTGGCTACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCAC
CCAGGGACGGCTACCCGTCTGTCTTCACACCCGAGGATGACACAACAGCC
TCTCCTGAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCT
GGAGAAGAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCTCTGCAGA
CTGCCGAAGATTTCTCCCGTGTAGTCAATAACATGGGTCTGAAGTTAATT
GGTTATGAAGGGGGAGCTGCAGTCAGGAGTGACATCGCGAAGGCAGTGAA
CACAGCGAGCGACGAGCCGCCCGAGTTTTGTATCGAACCCCACAATGAGC
TGGCCCAGACCTCGCACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGAC
CCTCCGTCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGATGTGCGGGA
AATTCTGCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCG
GTGTGATGTACTGGTATCGCCTGCCCACCCATTCTCCTGAAGCATACCTC
TCATGGCAAAAGTCGTTCCAGACCGAGGAAAGGGCGGCTGTAGAGAAGTA
TATGATAGCGAACAACACAAACTGGAGGTGGGAAGATGACAACCTATCAT
GGTGCATCACACTGCCACCCATGTTCAAGTACAGAGGGCAGAAACTGTGG
TTTTGCTCCGTCCACATAAATAACGCATCATATTTCAAGGCCCACCCCCT
CTGGTTCAACAAGGATCTCCCCGATCATGACTTTCCCCTCACCACCCACT
ATGGAGACGGCACCGACATTGAGGCAGAAGTAATTCAGCACATCCGCGAT
GTCCACTGGCAGGTTTCCATGGGTTTCCAGATGCAGAAGGGTGACTTACT
GGTCCTGAACAACATGTACTGCCAGCACGCCAGACTCGGCTTCACCGGGA
AACGGAAGCTTGCCGTCGCGTTGGCCAAGCAGGAGCAGGACTATTCGGAG
TACTACTGAATGGCCGTCATACTACCGACAGCCTACAGAAGTGTGTGGTC
ACGCAGTGTGCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATA
GTCACGCATCAACGTCATTTGGCACCGAAGTCAACCTCGTGGAGACCCAC
GTTGACTGGGCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGAAG
GAAGTGGCTACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGC
CACCCAGGGACGGCTACCCGTCTGTCTTCACACCCGAGGATGACACAACA
GCCTCTCCTGAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGT
GCTGGAGAAGAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCTCTGC
AGACTGCCGAAGATTTCTCCCGTGTAGTCAATAACATGGGTCTGAAGTTA
ATTGGTTATGAAGGGGGAGCTGCAGTCAGGAGTGACATCGCGAAGGCAGT
GAACACAGCGAGCGACGAGCCGCCCGAGTTTTGTATCGAACCCCACAATG
AGCTGGCCCAGACCTCGCACTTCCCTGAAAAGGTCATATTTTTCTGCCTG
GACCCTCCGTCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGATGTGCG
GGAAATTCTGCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGC
TCGGTGTGATGTACTGGTATCGCCTGCCCACCCATTCTCCTGAAGCATAC
CTCTCATGGCAAAAGTCGTTCCAGACCGAGGAAAGGGCGGCTGTAGAGAA
GTATATGATAGCGAACAACACAAACTGGAGGTGGGAAGATGACAACCTAT
CATGGTGCATCACACTGCCACCCATGTTCAAGTACAGAGGGCAGAAACTG
TGGTTTTGCTCCGTCCACATAAATAACGCATCATATTTCAAGGCCCACCC
CCTCTGGTTCAACAAGGATCTCCCCGATCATGACTTTCCCCTCACCACCC
ACTATGGAGACGGCACCGACATTGAGGCAGAAGTAATTCAGCACATCCGC
GATGTCCACTGGCAGGTTTCCATGGGTTTCCAGATGCAGAAGGGTGACTT
ACTGGTCCTGAACAACATGTACTGCCAGCACGCCAGACTCGGCTTCACCG
GGAAACGGAAGCTTGCCGTCGCGTTGGCCAAGCAGGAGCAGGACTATTCG
GAGTACTACTGAATGGCCGTCATACTACCGACAGCCTACAGAAGTGTGTG
GTCACGCAGTGTGCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACA
ATAGTCACGCATCAACGTCATTTGGCACCGAAGTCAACCTCGTGGAGACC
CACGTTGACTGGGCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGG
AAGGAAGTGGCTACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCA
AGCCACCCAGGGACGGCTACCCGTCTGTCTTCACACCCGAGGATGACACA
ACAGCCTCTCCTGAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGA
GGTGCTGGAGAAGAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCTC
TGCAGACTGCCGAAGATTTCTCCCGTGTAGTCAATAACATGGGTCTGAAG
TTAATTGGTTATGAAGGGGGAGCTGCAGTCAGGAGTGACATCGCGAAGGC
AGTGAACACAGCGAGCGACGAGCCGCCCGAGTTTTGTATCGAACCCCACA
ATGAGCTGGCCCAGACCTCGCACTTCCCTGAAAAGGTCATATTTTTCTGC
CTGGACCCTCCGTCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGATGT
GCGGGAAATTCTGCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGA
AGCTCGGTGTGATGTACTGGTATCGCCTGCCCACCCATTCTCCTGAAGCA
TACCTCTCATGGCAAAAGTCGTTCCAGACCGAGGAAAGGGCGGCTGTAGA
GAAGTATATGATAGCGAACAACACAAACTGGAGGTGGGAAGATGACAACC
TATCATGGTGCATCACACTGCCACCCATGTTCAAGTACAGAGGGCAGAAA
CTGTGGTTTTGCTCCGTCCACATAAATAACGCATCATATTTCAAGGCCCA
CCCCCTCTGGTTCAACAAGGATCTCCCCGATCATGACTTTCCCCTCACCA
CCCACTATGGAGACGGCACCGACATTGAGGCAGAAGTAATTCAGCACATC
CGCGATGTCCACTGGCAGGTTTCCATGGGTTTCCAGATGCAGAAGGGTGA
CTTACTGGTCCTGAACAACATGTACTGCCAGCACGCCAGACTCGGCTTCA
CCGGGAAACGGAAGCTTGCCGTCGCGTTGGCCAAGCAGGAGCAGGACTAT
TCGGAGTACTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:6432233..6435206 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95021_evm0 |
| Biotype | protein_coding |
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