transcript:BL91128_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL91128_cuf0
Unique Nametranscript:BL91128_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL91128_cuf0

>transcript:BL91128_cuf0-protein ID=transcript:BL91128_cuf0-protein|Name=transcript:BL91128_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=242bp
CDQCDYSSARKSNLDSHLAKHTGEKPFMCGECGYRTISNSKLSRHMRTHT
GEKPYKCDLCDYSAAQKSTLDSHLAIHTGEKPYMCGKCGYGATKISDLSK
HMRTHTGEKPYKCNRCDYSAAQKSNLDSHLAQHTGEKPYMCGECDYRCLR
KSQLSRHMRTHTGEKRYMCWECGYRTIDKYHLSRHMRTHTGAKPFKCDQC
DYSAADKSSLDQHLAKHTGENSTYVGNAGTGQLKSPTCRDIP
Run BLAST on NCBI

mRNA from alignment at Sc0000114:132526..133366-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL91128_cuf0 ID=transcript:BL91128_cuf0|Name=transcript:BL91128_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=841bp|location=Sequence derived from alignment at Sc0000114:132526..133366- (Branchiostoma lanceolatum)
TGTGACCAGTGTGATTATTCCTCAGCAAGGAAATCTAATTTGGACAGCCA
TCTAGCGAAACATACCGGTGAGAAACCCTTCATGTGTGGCGAGTGCGGGT
ACAGGACTATCAGCAATTCCAAGTTGTCAAGGCATATGAGAACCCATACA
GGGGAAAAACCTTACAAGTGTGACCTGTGCGACTATTCTGCTGCACAGAA
ATCTACCTTAGACAGCCATCTAGCCATACACACCGGTGAGAAACCCTACA
TGTGTGGAAAGTGTGGCTACGGAGCAACTAAAATATCTGACTTATCCAAA
CATATGAGAACTCATACTGGTGAAAAACCCTACAAGTGTAACCGGTGTGA
TTATTCCGCTGCGCAGAAATCCAATTTGGACAGCCATCTAGCCCAACACA
CCGGTGAGAAACCCTACATGTGTGGAGAGTGTGACTACAGGTGCCTCCGC
AAGTCTCAGTTGTCCAGACATATGAGAACCCATACAGGTGAAAAACGGTA
CATGTGTTGGGAGTGTGGGTACCGCACAATTGACAAGTATCATCTGTCCA
GACATATGAGAACTCACACAGGTGCAAAACCCTTCAAGTGTGACCAGTGT
GACTATTCTGCTGCAGATAAATCCTCCTTGGACCAACATCTAGCAAAACA
CACAGGGGAAAACTCTACATATGTGGGGAATGCGGGTACGGGACAGCTAA
AAAGTCCCACCTGTCGAGACATACCTTGAACAGACATTTAGCAAAACACC
GGTGAGAAACCCTTTATGTGTGGGGAGTGCGGGTACAGGACAGCTGACAA
GCGTAACCTAGAGTGTCCTGCATCTAACTAAACACACTGTT

Coding sequence (CDS) from alignment at Sc0000114:132526..133366-

>transcript:BL91128_cuf0 ID=transcript:BL91128_cuf0|Name=transcript:BL91128_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=729bp|location=Sequence derived from alignment at Sc0000114:132526..133366- (Branchiostoma lanceolatum)
TGTGACCAGTGTGATTATTCCTCAGCAAGGAAATCTAATTTGGACAGCCA
TCTAGCGAAACATACCGGTGAGAAACCCTTCATGTGTGGCGAGTGCGGGT
ACAGGACTATCAGCAATTCCAAGTTGTCAAGGCATATGAGAACCCATACA
GGGGAAAAACCTTACAAGTGTGACCTGTGCGACTATTCTGCTGCACAGAA
ATCTACCTTAGACAGCCATCTAGCCATACACACCGGTGAGAAACCCTACA
TGTGTGGAAAGTGTGGCTACGGAGCAACTAAAATATCTGACTTATCCAAA
CATATGAGAACTCATACTGGTGAAAAACCCTACAAGTGTAACCGGTGTGA
TTATTCCGCTGCGCAGAAATCCAATTTGGACAGCCATCTAGCCCAACACA
CCGGTGAGAAACCCTACATGTGTGGAGAGTGTGACTACAGGTGCCTCCGC
AAGTCTCAGTTGTCCAGACATATGAGAACCCATACAGGTGAAAAACGGTA
CATGTGTTGGGAGTGTGGGTACCGCACAATTGACAAGTATCATCTGTCCA
GACATATGAGAACTCACACAGGTGCAAAACCCTTCAAGTGTGACCAGTGT
GACTATTCTGCTGCAGATAAATCCTCCTTGGACCAACATCTAGCAAAACA
CACAGGGGAAAACTCTACATATGTGGGGAATGCGGGTACGGGACAGCTAA
AAAGTCCCACCTGTCGAGACATACCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL91128gene:BL91128Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL91128_cuf0-E1BL91128_cuf0-E1-1564476830-316266Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL91128_cuf0transcript:BL91128_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000114genomeSc0000114:132526..133366 -
Properties
Property NameValue
Transcript idBL91128_cuf0
Biotypeprotein_coding