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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL91119_cuf1 >transcript:BL91119_cuf1-protein ID=transcript:BL91119_cuf1-protein|Name=transcript:BL91119_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=112bp
MDCVWTISAPEGIYIELEFTAFDVEAGGSSCSYDYVAVYDGPDITAPLLA
KLCGNTIPAPVHSHGNVLTVIFVTDYSVTMTGFALVYTTSDNPPVHHNGG
GREKDQSRLSCL Run BLAST on NCBI mRNA from alignment at Sc0000006:3255047..3257668- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL91119_cuf1 ID=transcript:BL91119_cuf1|Name=transcript:BL91119_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2622bp|location=Sequence derived from alignment at Sc0000006:3255047..3257668- (Branchiostoma lanceolatum)
CATGGACTGTGTTTGGACCATCAGCGCACCCGAGGGCATCTACATCGAAC
TGGAGTTCACCGCCTTTGACGTCGAGGCTGGTGGATCTTCTTGCAGGTGA
GACAGACGTCTTTCCCTTAAGCCGCGGTAACACATAGCCAAACATGGCCC
CCGAGTCGGGAGGCCATGATCGGCTATGTGTAACCGCGGCTCTTAACGTG
TTAGACGGTCATTTCACTAGTTACCCATTGATATGAGTTCCAGCTTACAT
CTGAGCACTTCATCTTTACTTGTCAGCTATGACTATGTTGCCGTGTACGA
CGGCCCCGACATCACCGCGCCGCTTCTCGCCAAGCTCTGCGGGAACACCA
TCCCTGCCCCGGTCCACTCTCACGGCAACGTCCTAACCGTGATCTTCGTC
ACCGACTATAGCGTCACGATGACGGGCTTCGCACTTGTGTACACAACTTC
GGACAACCCTCCCGTGCACCGTGAGTTTAAAGCGTTTTGTTAGCTAGCTC
ATGTTGGATGAAATATACACATGTTACAGTCACAATCTACAGTGCAAGCG
ACATTTTTGTATCCTATCTGACTGATACCTTTGATACGAGATGGAGCGTA
AACAGTGCTATTCTTTTGACCTTCCACTTATCTAATACAATTATACAGTT
TGTACGTAAGACGGTTTTATTCTACTACAACACTTACTTCAAAAACATCT
GGGGCGCCTGTGTATATAGATTGCTATGTTTCTCTGCATCCATGTTGCTA
TGTATAGTTTTTGTTTTTACTATTGGTCAGTTTGTGCCTGGAACAAAATT
GAAATGAAATTAGAATAAACATGCTTGCTTGGTACGGATGTGCTGCCCAC
TTCTTGTCCCTAGTCATTTTTAGCGGTCTCCTTGATAGCCAGACAAACTA
AAGTCGCACAGTAGGTTTCCATGCGTTCTGCCTTCCCCAGCGTCTGGTTG
TGGTGGTCCCAAAGAGCTGACCGCTCCCTTTGGCGACTTCAGCAGCATGA
ACTTCCCCAACAACTACGACAACAACGCGCAGTGCCAGTGGGAGGTGGGC
CGGAAAACATTTCATTTTCTTTTTTTTAACTAAACAGTGCAATTCTTAGG
GCCCATTCACACTTGTGTGTACAATGTATATTCCAGTGCGTATGAGTTGC
GTATTAACATTTTCTTGCTATAGGTAAAGTTTGTAGGGAAGAAGTTGTTT
TCCACTTGAACACACTGTTGTGCAGCCTAGTTATCGAACCAAAGAAATGT
TTTTTTTCGGCTGCATACTTTACCTAAAGCCCCTGTCACACTTATGCGTA
TATACAAGCCCGCATGACAAGCCCGTATTAACATGTTTTTTGTCAAGATT
GAGTTTTCAGCCCAAGAAGTCGTTTCCTTGGTTCGATAACTAGGCTGCAC
AACGGTGGGTCAACGCAGAAAAGAACTTCTTCCCCGCAAACTTTCCTTGA
ACCTAAGAAATGTTAATGCGCAACTCACACGCACTTGAATATACGCACAA
GTATGACAGGGCCCTAAACCCCAAAAAAATGTTTATATGTAACTCATGCG
GAGTTGAATACACGCACAAGTGTGAAGGGGGCATTAATCTTGAGCACGCC
AAACGCGCATGGACTTGATTTACCAATCTTATGGAGGACAAATCACTGTG
TAGTTGTGATCTACTTGTTTGGTACTTTTACAGTTTTCTGTCTTTGCAGA
TAACGGTGGAGGCAGGGAAAAGGATCAATCTCGTCTTTCCTGTCTTTGAG
CTTGAGGAAGAGAGAGACTGTCCCGGCACTAACGACTACGTGGAAATCTT
CGACAACGATGACTCTCTTGGTAAAACCCTTATAAGTTGTTTTACTTGAG
TCACGAACTCCTCATACTTAATTGTTACCTTCGCCAAGAAGGTTATCTTT
TACCGAGCGTGTGTCTATGTGTGTGTTAAGATAACACTGTCATACTTCTG
CAATTTGGGTGGAGAAGATGATCAACTGATATGATTTATGCAAACGATGA
CATTCTTTGCATGATGAAGAAGAAATACTCATAATACGTCAATCGAAAGG
GTTAATATCATTTGGCAATTCCAGTTATATTTGTACTCTAACATATCCTT
CAAATCCTTCGCTAGGTCGTCACTGCGGAAACCTAAACCTGCAGCTACCA
CCACTCACGTCTACGTCCAACACGCTGAAGGTGGTGTTCTACAGCGACGA
CAGTGCCACTGCGACGGGCTTTTTGGCGCAGTACACAACCATTGCAAAGT
GATGAAAGTGAACACTCAAGATTCTAGAAAATGTGTATATTCATTTACAG
GGGACAGGGTATTCGTCATGGAGAAAGATACCAATGGTGTCAAATAACAC
CAAAACGGACACAATAAATGTTTACATGTCAATACAAATGCGTGAGATGC
GTTTATATACATGTACATGCACTATAGCTGTACATGAAGTGCAAACATAG
ACACGATGCTGAAGAAATGAGACATGCATGCAAAGATATTTGACGGCTAA
AGTCGATTATTTTCCACAGAAATCATGTCCCATGCATTTGACAAGTGTCC
TGAAATAATTCTGTTCCAGATCAGTGTGTTGTATTCTTTTTTCTCGATCG
TCTTTCGACACAGCGGTCATAA Coding sequence (CDS) from alignment at Sc0000006:3255047..3257668- >transcript:BL91119_cuf1 ID=transcript:BL91119_cuf1|Name=transcript:BL91119_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1017bp|location=Sequence derived from alignment at Sc0000006:3255047..3257668- (Branchiostoma lanceolatum)
ATGGACTGTGTTTGGACCATCAGCGCACCCGAGGGCATCTACATCGAACT
GGAGTTCACCGCCTTTGACGTCGAGGCTGGTGGATCTTCTTGCAGCTATG
ACTATGTTGCCGTGTACGACGGCCCCGACATCACCGCGCCGCTTCTCGCC
AAGCTCTGCGGGAACACCATCCCTGCCCCGGTCCACTCTCACGGCAACGT
CCTAACCGTGATCTTCGTCACCGACTATAGCGTCACGATGACGGGCTTCG
CACTTGTGTACACAACTTCGGACAACCCTCCCGTGCACCATAACGGTGGA
GGCAGGGAAAAGGATCAATCTCGTCTTTCCTGTCTTTGAATGGACTGTGT
TTGGACCATCAGCGCACCCGAGGGCATCTACATCGAACTGGAGTTCACCG
CCTTTGACGTCGAGGCTGGTGGATCTTCTTGCAGCTATGACTATGTTGCC
GTGTACGACGGCCCCGACATCACCGCGCCGCTTCTCGCCAAGCTCTGCGG
GAACACCATCCCTGCCCCGGTCCACTCTCACGGCAACGTCCTAACCGTGA
TCTTCGTCACCGACTATAGCGTCACGATGACGGGCTTCGCACTTGTGTAC
ACAACTTCGGACAACCCTCCCGTGCACCATAACGGTGGAGGCAGGGAAAA
GGATCAATCTCGTCTTTCCTGTCTTTGAATGGACTGTGTTTGGACCATCA
GCGCACCCGAGGGCATCTACATCGAACTGGAGTTCACCGCCTTTGACGTC
GAGGCTGGTGGATCTTCTTGCAGCTATGACTATGTTGCCGTGTACGACGG
CCCCGACATCACCGCGCCGCTTCTCGCCAAGCTCTGCGGGAACACCATCC
CTGCCCCGGTCCACTCTCACGGCAACGTCCTAACCGTGATCTTCGTCACC
GACTATAGCGTCACGATGACGGGCTTCGCACTTGTGTACACAACTTCGGA
CAACCCTCCCGTGCACCATAACGGTGGAGGCAGGGAAAAGGATCAATCTC
GTCTTTCCTGTCTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000006 | genome | Sc0000006:3255047..3257668 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL91119_cuf1 |
| Biotype | protein_coding |
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