transcript:BL91070_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL91070_cuf0
Unique Nametranscript:BL91070_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL91070_cuf0

>transcript:BL91070_cuf0-protein ID=transcript:BL91070_cuf0-protein|Name=transcript:BL91070_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=223bp
ECPNPDDFRCETSGVCFLSWWQCDGLAHCEDESDEKDCWSRDCPESDYLR
CESSGGCVAPLQQCDGANHCEDGSDEKNCAGKPCPIPDDQFRCKSTAECV
PATICDRIDDCLDGSDEEEDCWSRECPSSDSFRCESGGECLDSWLHCDGS
EDCECGSDERDCWNKECPNYDDFRCESNGGCVESWHLCDNHANCEDGSDE
EDCLSEECDPEYDISCDGICLDE
Run BLAST on NCBI

mRNA from alignment at Sc0000008:5032688..5033359-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL91070_cuf0 ID=transcript:BL91070_cuf0|Name=transcript:BL91070_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=672bp|location=Sequence derived from alignment at Sc0000008:5032688..5033359- (Branchiostoma lanceolatum)
AGAGTGTCCTAACCCCGACGATTTCAGGTGTGAAACTAGCGGAGTTTGTT
TTCTGTCATGGTGGCAGTGTGACGGTTTGGCTCATTGTGAAGACGAGTCG
GATGAGAAAGACTGCTGGAGCAGAGACTGTCCCGAATCTGACTATTTAAG
GTGTGAGAGTAGCGGAGGTTGTGTTGCTCCATTGCAACAATGTGACGGCG
CTAATCACTGTGAAGACGGCTCAGATGAGAAAAATTGCGCAGGCAAACCG
TGCCCCATTCCCGACGACCAGTTCAGGTGTAAAAGTACTGCAGAATGCGT
CCCTGCGACGATTTGTGACCGTATTGATGACTGTTTAGACGGTTCAGATG
AGGAGGAGGATTGCTGGAGCAGAGAGTGTCCTAGCTCCGACAGCTTTAGG
TGTGAAAGTGGAGGAGAATGTTTAGATTCATGGCTTCATTGTGACGGTTC
GGAGGACTGCGAGTGCGGTTCAGATGAAAGAGACTGCTGGAACAAAGAGT
GTCCCAACTACGACGATTTCAGGTGCGAAAGTAATGGAGGATGTGTTGAA
TCATGGCACCTATGTGACAATCATGCCAACTGTGAAGATGGCTCAGATGA
GGAAGACTGCTTGAGCGAAGAGTGCGACCCCGAATATGATATCAGCTGTG
ACGGTATTTGTTTGGATGAGTA

Coding sequence (CDS) from alignment at Sc0000008:5032688..5033359-

>transcript:BL91070_cuf0 ID=transcript:BL91070_cuf0|Name=transcript:BL91070_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=669bp|location=Sequence derived from alignment at Sc0000008:5032688..5033359- (Branchiostoma lanceolatum)
GAGTGTCCTAACCCCGACGATTTCAGGTGTGAAACTAGCGGAGTTTGTTT
TCTGTCATGGTGGCAGTGTGACGGTTTGGCTCATTGTGAAGACGAGTCGG
ATGAGAAAGACTGCTGGAGCAGAGACTGTCCCGAATCTGACTATTTAAGG
TGTGAGAGTAGCGGAGGTTGTGTTGCTCCATTGCAACAATGTGACGGCGC
TAATCACTGTGAAGACGGCTCAGATGAGAAAAATTGCGCAGGCAAACCGT
GCCCCATTCCCGACGACCAGTTCAGGTGTAAAAGTACTGCAGAATGCGTC
CCTGCGACGATTTGTGACCGTATTGATGACTGTTTAGACGGTTCAGATGA
GGAGGAGGATTGCTGGAGCAGAGAGTGTCCTAGCTCCGACAGCTTTAGGT
GTGAAAGTGGAGGAGAATGTTTAGATTCATGGCTTCATTGTGACGGTTCG
GAGGACTGCGAGTGCGGTTCAGATGAAAGAGACTGCTGGAACAAAGAGTG
TCCCAACTACGACGATTTCAGGTGCGAAAGTAATGGAGGATGTGTTGAAT
CATGGCACCTATGTGACAATCATGCCAACTGTGAAGATGGCTCAGATGAG
GAAGACTGCTTGAGCGAAGAGTGCGACCCCGAATATGATATCAGCTGTGA
CGGTATTTGTTTGGATGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL91070gene:BL91070Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL91070_cuf0-E1BL91070_cuf0-E1-1564476830-86457Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL91070_cuf0transcript:BL91070_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000008genomeSc0000008:5032688..5033359 -
Properties
Property NameValue
Transcript idBL91070_cuf0
Biotypeprotein_coding