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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL91062_cuf0 >transcript:BL91062_cuf0-protein ID=transcript:BL91062_cuf0-protein|Name=transcript:BL91062_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=105bp
MEIRCSFVQLFSIEDFPNNAPAVPEKAARGPKPTPLLYYITGYLPPKNQD
HSMSRSKDTKTEVLLQYQGHIPGGPKSTLTFGLTPAQIPNIIVIHPEVLE
LCCLQ Run BLAST on NCBI mRNA from alignment at Sc0001078:4849..10066+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL91062_cuf0 ID=transcript:BL91062_cuf0|Name=transcript:BL91062_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=5218bp|location=Sequence derived from alignment at Sc0001078:4849..10066+ (Branchiostoma lanceolatum)
CAATTACAAACTGCACTTGGCTACACCCCCAAAAAGGCATTTCCAGCTGT
AAGCGCAGGACCGAATCACACACACTGCCCAGGCTGTGTACTTCCCGACC
TAGCGTGTGGCTGCCGAACTTTGCTTGCTAATTTCTTCAGTTACAAACAA
GCTTTCATCAGTTTGACGCTTGATATCAGCTGGGCTAGCTAAAAGGAATT
GTACAACTTTCACTTTTCGTAGCGCACGTGCTGTTCCGTTAGTCATTGAC
TTGAAATACGTGACCTACATCATGGAGATCTGATATGACGTTATTTTCTG
CCTGGATTTGTCAAAAAACAATATGTAATAAAGTGTTTAAAAGCTCCTAC
AAATTTACACGCATGATATACAAAACAGTATGTTATGGTAGGTTGAAATA
CTGAAGTTAGTTTGTGAAAGTAACGGAGAAAACATACGAGCTGAGTGTGA
ACTTCCAGATTGCGAGGCCGGCATATTTTCTCAATACAAAGCACATTGGA
AACGATTGATGTATTACGTGGCATGGGACCGCTCATGTTTTTTAAAAATA
AAGACAAGCCGCTTTTTGCGACCCGCCAAACACTAGCAGGTGCCCTAGAA
GTGCTGCGGGAACGCTCAGTAATCTGTATAAAGAGCAGCGGGCGGCTAGT
TCCTGACGGCTTTTGTTTACCTGCTGACATTGACATGTACGTGATTCAAG
CCTAGCCCAGCCATCTAAATATGGTAAATTTATGTAAACGTCACACACAC
TTTTCAAAACAGCCAGTGACAGCGCCGGGCTGGCAGACGGTTGCTATGGA
CTGGCGGTTGCTAACACAATGATGGACGGCGGCAGCCCCTGTTCTCTGTT
GAGGGCGTGATCAACGTGTTGTTTTTCCACAAGCCGCCAGAACTTGCCAT
GGGAAAGTTTTTCTAGATGATAAATTAGGGATATTTGTGGGAACTGTTGC
AAGAATTTTAATGCCATGATACAACTAGTAACCAGAGGATTTTTTAATCT
TCTTCGACGCTATTTCTTCACACAAGGGATTGGATATTAGAAACAAGATG
TGGATATCGTGGCCAGGATTGAACGCTACTTGGCGGGACTTGTATGTCGT
CAAGCGTAGCTTCCATGTCGCTTCATGAATCTTCGTCAATTTCAGTGGTA
CCTTCTGTACTCTTGGAAAGATATTGAAAATACCTAAGACGCTATACAGA
GGATACGTATCTTTGCAGTCCGTGACATTTAAGGGTGGTATTATATAAAG
GTTTGAACAAATAATTATATATTCTAAATAAACCAATGAGGTTATAACAT
CCTTGAATAAACTTAACATCAACTAAATTTGTGTACATAATTTTTGAATC
TTACCGTTCATAAATCTTCTTCCAATAAACTTACTTTACCAGTGAATCTT
TTCCGGGTCCTTGGGCACTGGGATCGCCTGAGTCCCGAACCATCCGTGCG
CCGGGTGCTAAGTACGATGACTTGTAGTGTACGGAACGTATCTATTTTTC
GTGTTAATATCAATAATACACAAACGAAACGCTGTTGTTTATTGAAGTTC
AACTTGATTTTCATGCATCAACATTCTTATCTTAACGTTTTATGGATGAA
TCGGTATTACTGGAAGCTCCCTGCGTCCATTTTCTGGCTGGTTTGAGGTT
CTGCTCCGATTTGTCCGGACAGTGACCTCAAATAAATTACGCACCCCCGC
TTTGGCGATCGCCCGAGACACTTTTTGGATTTTGAAAAGTTTCAAAAGTG
CATACTTTAATCAAGAAAATACGGTAATCATAAACAAAATTTCTAAGTAC
TCAGTATACAAAAGGATGTAAGGGAAGAGGTACAAGGGGAAACAAGAGTT
CCACGACCTCAAATCTCCATGAATAATTCTATTCATGCAAATGACTTACA
CATGTGCATACTATATGCTTGGTCATGAACACCTTTATCTACCTTACATG
TTGCAATATTGACAGTCCTATAATTTTCAAATTAGATGAATTATGTATCT
TGCATTGATTATGCAAATTAGGAATTTATTTGCATAATTGGTATCTATTG
ATGCTCCACTTTCCATAAACTACATATGTTACATGTATTTGAGCCTGATA
ATGGAAAACATTGCAAATATAGATAATCCTCATTAGCTATGCAAATTAAG
TAACAATTAGCATAATTTGCACTTCACTATGTATATCTCTCTCCAAGCTA
CCTGCATACTAAGTATCATATTGACAGTCCTATAATTTTCCAATTAGATG
AGATATGGTGTTTTTCATTAATTATGCAAATTAGGAATCTATTTGCATAA
TTGGTACCTGTTGATGATCCACTTTCCATAAACTACATATGTTACATGTA
TTTGAGTCTGATAATGGAAAACACTGTAAATATAGATTTTCCTCGTTAGA
TATGCAAATTACGTCCCAATTAGCATAATTTGTACTTCATTTTGTATATC
TCTATCTGAGCTACCTACATACTAAATATCATGGAAATCCGTTGTTCCTT
TGTTCAGTTATTCTCCATAGAAGATTTTCCAAATAACGCCCCTGCAGTTC
CAGAGAAAGCTGCTAGGGGGCCCAAACCTACACCACTTCTTTATTACATC
ACAGGCTACCTGCCACCCAAAAATCAAGACCACAGCATGTCCAGGTCAAA
AGATACAAAAACTGAAGTTCTGCTGCAGTACCAAGGTCACATACCAGGGG
GCCCAAAATCGACCTTGACCTTCGGCCTCACACCCGCCCAGATACCAAAT
ATCATTGTAATCCATCCAGAGGTTCTTGAGTTATGCTGCCTACAATAGTC
CGGAAACACAAACACAAACACACACACACACACACAGACACGCCAAAAAC
AATATCTCCATTTTTCATGGAGATAATAAACTGAAAGTTGGATAGGGCAG
CTAGGGAATGAGAGAGCCGTTCTTTGACAAATTCAAAACAGATGTCTCAC
ACCAAGGAGGTTTAAAATCAAAACCTTCTGATTAAACCTCCTTGCTCACA
CTTAGACTAGAGAGTACCTGAATGCATGTGCTTGTATACAATGTACAATG
TACATGTAAATGTATTTGTGTTTGTGGTTATGTGTGCCAGTGTGCATGGG
CGTGGATTGGAATGTTGTGAGTGTGTGTGTTTGTACAATATATACCATAT
TTTCTTTAAAGTACGCACCCTGATTTAAGTACGCATCCCCGATTCGACAA
AGTTCCAGGCAAATTTGCGGCCTTGAAACGTAAAATGAGAAAACCCGAAT
AAAGTATGCACCCCTCCTCCGGGCCCATGTCACAGTTGAAATGTCCCGAC
AAGTGCTTGTCCTGAAGGCAATTCCAATCACAAATAATTGTATGAAAATA
CATTTAAGTCGTTTAATAAGTAATTGTGTCGTAACTCGTTTTCTAGTTGG
AACTTTTCATGTTTCATCCTTTATAGAAGACGTTGAACTTCATCATGGTT
AACGTTACCCTGCTCGGTTCATATAATAGCGCCAGCCATTGGGTGCAGAT
TTGCAAATCATTAAATTGAGAACATATTCACAACACTGGGTAAGAATGAT
GTGATCAGAAAACACTCTCCAGATACTGGCAATATATAACTGTTATTTCT
TGATATAAAACCGAAGAACGTAACAAAATATACGGCAACGCATACAATGT
AGCATGCCGATCGGCCTGGCAGACAACCGTCAGAGAAGAAACGAGATGAT
GGCGAAAATCGTCTTTCTTATAATTTTCGTGTTGGACCGAAAAACTATTA
TATAAGTTCGAAACCCGGTATTTCCCTGTGAAACACGGTGTTACATCCAA
CCGAAAAATGGAAAATCGCAATGATTTCCTGACGGCCCTTCGCTGCCCCG
ACACACCTGCAGCGGCTTGGATTGCGTAATACTGTGCAAATATTGCGGGA
CACAATCGCGTTACGCCTCTCTTATTGGCTGCTGCTGAACTAGTGGCGTG
AAATGGCGGTGGCGAGACAGGCCGCGTTTTTATGTCCGAGGTTTGATATA
CCTGCCAAAATTATGCATATTATCGGTGCATACTCAGAATTTAACGGGCC
AACGAGATGCCATAGGGTGCTTTTTTATCGAAAATTTTGCCGTCGAAGTT
ACCGGAAGTGAAACGTACCACAAAACAACAACATTGTCACCGAGGATCGG
GATTTGTATTTCTTCTCCGAAAATCACAAAATAAACGAATGCATGTCTTA
CCGATGTCTTATTCATATAATTATATATACTTATGGTGCCGTTGTTCTTT
TCGGGGTTCCTTGGGCACTGGGCTGGGAACGGCTGGGTGCCAAATCATGC
CGGCAGCATGACTTGATCCGGTCGCCGGGTGCTCAGTACGTCAGATTTCT
TGTGTACTAGTACGGTACGTATCTATTTTTCGTGTTAATGTAAATGATGC
ACATACGAAACACAATCGTTTATTGAAGTTCAACTTTATTTTCACGCGTC
AACATTCTTATCTAAACGTTATGTGGATGAATTGGTGCTATTCGACGGTC
CCCTCGTCCTTGTGCCGAACCATGCCGGCAGCATCATGACTTGATCCGGG
CGCCGGGTGCTCAGTACATCAGATTTCTTGTGTACTAGTATGGTACGTAT
CTATTTTTCGTGTTGATATAAATGATGCACATACGAAACACTGTTGTTTA
TTGAAGTTCAACTTTATTTTCATGCGTCAACATTCTTATCTAAACGTTAT
ATGGACGAATTGGTGCTATTTGATGGTCCCCTCGTCCTTGTTCTGACTGG
TTTCAGGTTCAATCTGTTCCAATTTGTCGGGACAGTGACCTCAAACAAAG
TACGCATCCCCGCTTTGGCGATATCCTGAGACACTTTTTGGATATTTAAA
AGTTTCAAAAGTGCATACTTTATTCGAGAAAATACGGTAGTGTTGAATAA
AGGATTTTTAAAGTAATACGCACGACTACAAATTGCAGGTATGTAAGCGT
GCCACACAGCACACTTCGACGGCGTCAAAATGTGCACAGGAACACGCTTT
GACGGCTGTCCCAGGTGCCATATGGGGCACCCAGAACTGTTTTCTACGGT
CTCCACATTGATATAAGACGCAAACAGTTGACAATACTCGGTCAGAAAAT
AGCTGAACAATTATATTATACGATCTTTTGATTTCTATGAAGGACAGAGT
GTGGGAAAATACGGAATTTGCGAAGTTCGTACGGAGCGCCTGTGAGAACG
TGCGAGCACCGATCTCGG Coding sequence (CDS) from alignment at Sc0001078:4849..10066+ >transcript:BL91062_cuf0 ID=transcript:BL91062_cuf0|Name=transcript:BL91062_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=318bp|location=Sequence derived from alignment at Sc0001078:4849..10066+ (Branchiostoma lanceolatum)
ATGGAAATCCGTTGTTCCTTTGTTCAGTTATTCTCCATAGAAGATTTTCC
AAATAACGCCCCTGCAGTTCCAGAGAAAGCTGCTAGGGGGCCCAAACCTA
CACCACTTCTTTATTACATCACAGGCTACCTGCCACCCAAAAATCAAGAC
CACAGCATGTCCAGGTCAAAAGATACAAAAACTGAAGTTCTGCTGCAGTA
CCAAGGTCACATACCAGGGGGCCCAAAATCGACCTTGACCTTCGGCCTCA
CACCCGCCCAGATACCAAATATCATTGTAATCCATCCAGAGGTTCTTGAG
TTATGCTGCCTACAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001078 | genome | Sc0001078:4849..10066 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL91062_cuf0 |
| Biotype | protein_coding |
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