transcript:BL91009_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL91009_cuf0
Unique Nametranscript:BL91009_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL91009_cuf0

>transcript:BL91009_cuf0-protein ID=transcript:BL91009_cuf0-protein|Name=transcript:BL91009_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=120bp
LYRRRADGQSLYCTMRDNGCEKSMSRQGANYPICIHPRPNAWRICFVFNC
GTTLIFFSVTFDQDFETFGLQEYNVENDLSNGENQSTAATNAAADSRGAY
DCEVCENIYKTAGWLEKHKS
Run BLAST on NCBI

mRNA from alignment at Sc0000119:428457..428891+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL91009_cuf0 ID=transcript:BL91009_cuf0|Name=transcript:BL91009_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=435bp|location=Sequence derived from alignment at Sc0000119:428457..428891+ (Branchiostoma lanceolatum)
TTTATATAGAAGGAGAGCGGACGGGCAAAGTCTCTATTGTACTATGCGTG
ATAACGGGTGTGAAAAGTCAATGTCGCGTCAAGGTGCGAATTACCCAATA
TGCATACACCCCAGGCCGAACGCTTGGCGAATTTGCTTTGTTTTCAACTG
TGGAACAACTTTGATATTTTTTTCAGTGACTTTTGATCAGGACTTTGAAA
CATTTGGGTTACAAGAATACAACGTGGAAAATGATCTCTCTAACGGCGAG
AATCAAAGCACTGCGGCAACCAACGCTGCCGCCGACAGCCGCGGTGCATA
TGATTGCGAAGTCTGTGAGAATATATACAAAACTGCCGGATGGCTTGAAA
AACACAAGTCGTAGAGAACAGTATTTTTTTATTTTGTATATATGCCGACT
GAGGAGAAATTACAAACTTAGCTTGACTTGGCTCG

Coding sequence (CDS) from alignment at Sc0000119:428457..428891+

>transcript:BL91009_cuf0 ID=transcript:BL91009_cuf0|Name=transcript:BL91009_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=363bp|location=Sequence derived from alignment at Sc0000119:428457..428891+ (Branchiostoma lanceolatum)
TTATATAGAAGGAGAGCGGACGGGCAAAGTCTCTATTGTACTATGCGTGA
TAACGGGTGTGAAAAGTCAATGTCGCGTCAAGGTGCGAATTACCCAATAT
GCATACACCCCAGGCCGAACGCTTGGCGAATTTGCTTTGTTTTCAACTGT
GGAACAACTTTGATATTTTTTTCAGTGACTTTTGATCAGGACTTTGAAAC
ATTTGGGTTACAAGAATACAACGTGGAAAATGATCTCTCTAACGGCGAGA
ATCAAAGCACTGCGGCAACCAACGCTGCCGCCGACAGCCGCGGTGCATAT
GATTGCGAAGTCTGTGAGAATATATACAAAACTGCCGGATGGCTTGAAAA
ACACAAGTCGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL91009gene:BL91009Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL91009_cuf0-E1BL91009_cuf0-E1-1564476830-321643Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL91009_cuf0transcript:BL91009_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000119genomeSc0000119:428457..428891 +
Properties
Property NameValue
Transcript idBL91009_cuf0
Biotypeprotein_coding