transcript:BL90954_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL90954_cuf0
Unique Nametranscript:BL90954_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL90954_cuf0

>transcript:BL90954_cuf0-protein ID=transcript:BL90954_cuf0-protein|Name=transcript:BL90954_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=118bp
ECNKKFKRRRNLKVHIRSHNGEKPYKCDTCSSCFSKSSDLKKHMLTHTGE
KPYKCEECSKRFKRRRNLKVHIQTHTSEKSDIQTHTGEKPYKCEECGKRF
KRRKNLKVHMLTHTGEEP
Run BLAST on NCBI

mRNA from alignment at xpSc0039874:1305..1660-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL90954_cuf0 ID=transcript:BL90954_cuf0|Name=transcript:BL90954_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=356bp|location=Sequence derived from alignment at xpSc0039874:1305..1660- (Branchiostoma lanceolatum)
GAATGCAACAAGAAGTTCAAACGACGCAGGAATCTAAAAGTCCACATACG
TTCACACAATGGTGAGAAACCCTACAAATGTGATACTTGCAGCAGCTGTT
TCAGTAAAAGCAGTGATCTCAAGAAACACATGTTGACTCACACTGGTGAG
AAACCCTACAAGTGTGAGGAGTGCAGCAAACGGTTCAAACGACGCAGGAA
TCTAAAAGTCCACATACAAACTCACACAAGTGAGAAATCAGACATTCAAA
CTCACACTGGTGAGAAACCCTACAAGTGTGAGGAGTGCGGCAAGCGGTTC
AAACGACGCAAGAATCTAAAAGTCCACATGTTGACTCACACCGGTGAAGA
ACCTAA

Coding sequence (CDS) from alignment at xpSc0039874:1305..1660-

>transcript:BL90954_cuf0 ID=transcript:BL90954_cuf0|Name=transcript:BL90954_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=354bp|location=Sequence derived from alignment at xpSc0039874:1305..1660- (Branchiostoma lanceolatum)
GAATGCAACAAGAAGTTCAAACGACGCAGGAATCTAAAAGTCCACATACG
TTCACACAATGGTGAGAAACCCTACAAATGTGATACTTGCAGCAGCTGTT
TCAGTAAAAGCAGTGATCTCAAGAAACACATGTTGACTCACACTGGTGAG
AAACCCTACAAGTGTGAGGAGTGCAGCAAACGGTTCAAACGACGCAGGAA
TCTAAAAGTCCACATACAAACTCACACAAGTGAGAAATCAGACATTCAAA
CTCACACTGGTGAGAAACCCTACAAGTGTGAGGAGTGCGGCAAGCGGTTC
AAACGACGCAAGAATCTAAAAGTCCACATGTTGACTCACACCGGTGAAGA
ACCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL90954gene:BL90954Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL90954_cuf0-E1BL90954_cuf0-E1-1564476830-558563Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL90954_cuf0transcript:BL90954_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xpSc0039874genomexpSc0039874:1305..1660 -
Properties
Property NameValue
Transcript idBL90954_cuf0
Biotypeprotein_coding