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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90952_cuf0 >transcript:BL90952_cuf0-protein ID=transcript:BL90952_cuf0-protein|Name=transcript:BL90952_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=165bp
MTAEKQSPFLSSGPTRRDRLPVLVGPLVGVLAALVCGISVLTGVVVVHNM
QQELTAARERLAVLENFLHGFTSEAEDQAVDLSETDVLMTPDDGDHGSER
VKRDGTTLGCAQGPPGPAGRDGVAGRDGRDGVSGSAGPAGPVGLPGPAGD
KGEAGPPGRDGASGE Run BLAST on NCBI mRNA from alignment at Sc0000254:235148..237187+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90952_cuf0 ID=transcript:BL90952_cuf0|Name=transcript:BL90952_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2040bp|location=Sequence derived from alignment at Sc0000254:235148..237187+ (Branchiostoma lanceolatum)
ACTTAGTCCGCGCTGTTTTTCTCGGCAGTTTAGTTCCTTGTGAGACAATC
CGCAGCAGCAAGTTTTGAAAGTTTAGAGCGACTTCAACATACGACGGTCT
TGATAGCTTGTCGTGGAGAAATTTCCACAGCCTAGAAAGTAAGAAAGCAT
GACTGCGGAGAAGCAGAGCCCGTTCCTGTCCAGCGGACCGACCCGTCGGG
ACCGTCTGCCCGTGTTGGTCGGGCCGCTGGTCGGCGTCCTGGCCGCCCTG
GTGTGCGGGATCAGCGTGCTGACGGGGGTGGTGGTGGTGCACAACATGCA
GCAGGAGCTGACAGGTGTGAGGGGGGAGCTGACAGGTGTGAGGCAGGAGC
TGACAGGTGTGAGGGGGCAGCTGAGGCAGGAGCTGACCGCTGCCAGAGAG
CGTCTGGCTGTCCTAGAGAACTTCCTCCACGGCTTCACCAGCGAGGCCGA
GGACCAGGCCGTTGATCTATCTGAGGTGAGTACTAGTCTAGTACGCTCTT
ACATGATTAGTCCCATCGACTCCTCTATATAGACAATTACGTTTGTATAA
TCTAGTTAAGCCGCTTCTATACCTATTTTGTACCCTGTTCTTTTTAGTAT
GTTTTTTTGCAATTAGCCTTCGGGCAGGAATTTGCAATAAACTTATTATC
ACTATGGCCTTCTATTTTAGCATTTTGCAACTCGACTCCGATGTCTGGTT
AGAAACTAAATGTCCTTGCTATCCTACTTCACAGCGAGCGGGAAGTGGTA
CTGGTAATAGTTACTGGAAATTAGAAGTCTATATAATAGTAGCCTTAACC
TTGAATCACTTTTAACTAGTGTTAGGTTAATCGGCTGGTCACGTCTGGAA
GTGTGGTTAGAAAGGAGAATTTTCTCACTATCCCGACTACACAACGAACG
GGAAGTGGTACTGGTAATACCAAACTACTACTAGAAGTTATTGGCAACTA
GAAGTCTATCAAATACATGTAGCTATAGTGGTCTTAATCTTGAATCACTG
TAAACTCGTGTGTTAAGTTAATCGGCTGGTGATGTCGATTGAAAAATGCA
CTCAACTGTGACTGTTTAAATTTGCTACTGTAACGTCAACCTTCTCTCTT
TATATTCTGCATTACATGCGTAGTGAAACGCCTGTGTCTTTTGTCCTTAG
TCCAACACTGGACGTGAACTATCGTGAATGGTGTCGCGGCTGTCGCCCCA
GACATTGTCCCATCGCACGTACACTGCTATATTTGCTGTAACCATGCTCG
TCAATCTAACATGTGTCAGACTACTGATGTTCTTGGTCACATTTTGAACA
GACCGACGTTTTGATGACGCCAGACGACGGGGACCATGGTTCCGAGCGAG
TGAAGAGAGACGGAACGACACTGGGTGGGTCTTAAGTTCATCATGCTGTT
ATATTTTGTCTGAATTTTGTCTGAATTTCATACCAGTTCTGTTTTGCAAG
GGGAAAATCAAACATGAACTACACAGAGCATTTATACCGTCTTCTGTCAC
GCCTCACAACCCATCGCCCTGACTGTACCCTGCAGGTTGCGCACAGGGAC
CGCCTGGTCCCGCGGGACGGGACGGGGTAGCCGGGCGGGACGGACGGGAC
GGAGTCTCAGGCTCGGCCGGGCCGGCCGGACCTGTCGGCTTACCGGTACG
AAACGCATCCTTAATACACGTTAGAAGTTGTGTCATCTTCATGCTGACAT
AGGCGTGGTATCAGTAAAATAGTGTTTATGTCTACAGCATTTACTAGGTT
TTATTATGTAACTGTTCATTTAGATTATTTATTTATTAAAAGAAACATCA
AATAATACTAGATGGACAAAGGCCAAGTGACGGCGGACACAAATTATATT
CTCACCGCCACTTGTACAATATAGAAAATAGAATATTCGACAAGACACTC
AAAACTTGTGAATGGTAAATGAACAAATACCTAGTTTAAACGTGAGTCCG
AACTCCAATTTATATCTATATTTTGACAGGGTCCAGCCGGGGATAAAGGA
GAAGCAGGGCCGCCGGGAAGAGACGGGGCGTCAGGCGAAG Coding sequence (CDS) from alignment at Sc0000254:235148..237187+ >transcript:BL90952_cuf0 ID=transcript:BL90952_cuf0|Name=transcript:BL90952_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2475bp|location=Sequence derived from alignment at Sc0000254:235148..237187+ (Branchiostoma lanceolatum)
ATGACTGCGGAGAAGCAGAGCCCGTTCCTGTCCAGCGGACCGACCCGTCG
GGACCGTCTGCCCGTGTTGGTCGGGCCGCTGGTCGGCGTCCTGGCCGCCC
TGGTGTGCGGGATCAGCGTGCTGACGGGGGTGGTGGTGGTGCACAACATG
CAGCAGGAGCTGACCGCTGCCAGAGAGCGTCTGGCTGTCCTAGAGAACTT
CCTCCACGGCTTCACCAGCGAGGCCGAGGACCAGGCCGTTGATCTATCTG
AGACCGACGTTTTGATGACGCCAGACGACGGGGACCATGGTTCCGAGCGA
GTGAAGAGAGACGGAACGACACTGGGTTGCGCACAGGGACCGCCTGGTCC
CGCGGGACGGGACGGGGTAGCCGGGCGGGACGGACGGGACGGAGTCTCAG
GCTCGGCCGGGCCGGCCGGACCTGTCGGCTTACCGGGTCCAGCCGGGGAT
AAAGGAGAAGCAGGGCCGCCGGGAAGAGACGGGGCGTCAGGCGAAATGAC
TGCGGAGAAGCAGAGCCCGTTCCTGTCCAGCGGACCGACCCGTCGGGACC
GTCTGCCCGTGTTGGTCGGGCCGCTGGTCGGCGTCCTGGCCGCCCTGGTG
TGCGGGATCAGCGTGCTGACGGGGGTGGTGGTGGTGCACAACATGCAGCA
GGAGCTGACCGCTGCCAGAGAGCGTCTGGCTGTCCTAGAGAACTTCCTCC
ACGGCTTCACCAGCGAGGCCGAGGACCAGGCCGTTGATCTATCTGAGACC
GACGTTTTGATGACGCCAGACGACGGGGACCATGGTTCCGAGCGAGTGAA
GAGAGACGGAACGACACTGGGTTGCGCACAGGGACCGCCTGGTCCCGCGG
GACGGGACGGGGTAGCCGGGCGGGACGGACGGGACGGAGTCTCAGGCTCG
GCCGGGCCGGCCGGACCTGTCGGCTTACCGGGTCCAGCCGGGGATAAAGG
AGAAGCAGGGCCGCCGGGAAGAGACGGGGCGTCAGGCGAAATGACTGCGG
AGAAGCAGAGCCCGTTCCTGTCCAGCGGACCGACCCGTCGGGACCGTCTG
CCCGTGTTGGTCGGGCCGCTGGTCGGCGTCCTGGCCGCCCTGGTGTGCGG
GATCAGCGTGCTGACGGGGGTGGTGGTGGTGCACAACATGCAGCAGGAGC
TGACCGCTGCCAGAGAGCGTCTGGCTGTCCTAGAGAACTTCCTCCACGGC
TTCACCAGCGAGGCCGAGGACCAGGCCGTTGATCTATCTGAGACCGACGT
TTTGATGACGCCAGACGACGGGGACCATGGTTCCGAGCGAGTGAAGAGAG
ACGGAACGACACTGGGTTGCGCACAGGGACCGCCTGGTCCCGCGGGACGG
GACGGGGTAGCCGGGCGGGACGGACGGGACGGAGTCTCAGGCTCGGCCGG
GCCGGCCGGACCTGTCGGCTTACCGGGTCCAGCCGGGGATAAAGGAGAAG
CAGGGCCGCCGGGAAGAGACGGGGCGTCAGGCGAAATGACTGCGGAGAAG
CAGAGCCCGTTCCTGTCCAGCGGACCGACCCGTCGGGACCGTCTGCCCGT
GTTGGTCGGGCCGCTGGTCGGCGTCCTGGCCGCCCTGGTGTGCGGGATCA
GCGTGCTGACGGGGGTGGTGGTGGTGCACAACATGCAGCAGGAGCTGACC
GCTGCCAGAGAGCGTCTGGCTGTCCTAGAGAACTTCCTCCACGGCTTCAC
CAGCGAGGCCGAGGACCAGGCCGTTGATCTATCTGAGACCGACGTTTTGA
TGACGCCAGACGACGGGGACCATGGTTCCGAGCGAGTGAAGAGAGACGGA
ACGACACTGGGTTGCGCACAGGGACCGCCTGGTCCCGCGGGACGGGACGG
GGTAGCCGGGCGGGACGGACGGGACGGAGTCTCAGGCTCGGCCGGGCCGG
CCGGACCTGTCGGCTTACCGGGTCCAGCCGGGGATAAAGGAGAAGCAGGG
CCGCCGGGAAGAGACGGGGCGTCAGGCGAAATGACTGCGGAGAAGCAGAG
CCCGTTCCTGTCCAGCGGACCGACCCGTCGGGACCGTCTGCCCGTGTTGG
TCGGGCCGCTGGTCGGCGTCCTGGCCGCCCTGGTGTGCGGGATCAGCGTG
CTGACGGGGGTGGTGGTGGTGCACAACATGCAGCAGGAGCTGACCGCTGC
CAGAGAGCGTCTGGCTGTCCTAGAGAACTTCCTCCACGGCTTCACCAGCG
AGGCCGAGGACCAGGCCGTTGATCTATCTGAGACCGACGTTTTGATGACG
CCAGACGACGGGGACCATGGTTCCGAGCGAGTGAAGAGAGACGGAACGAC
ACTGGGTTGCGCACAGGGACCGCCTGGTCCCGCGGGACGGGACGGGGTAG
CCGGGCGGGACGGACGGGACGGAGTCTCAGGCTCGGCCGGGCCGGCCGGA
CCTGTCGGCTTACCGGGTCCAGCCGGGGATAAAGGAGAAGCAGGGCCGCC
GGGAAGAGACGGGGCGTCAGGCGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000254 | genome | Sc0000254:235148..237187 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90952_cuf0 |
| Biotype | protein_coding |
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