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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90912_cuf4 >transcript:BL90912_cuf4-protein ID=transcript:BL90912_cuf4-protein|Name=transcript:BL90912_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=300bp
MYLKSKNRKYNAIVHHTRYNKTWMESMFPPDTAYITVIREPMRHLKSVFN
YYHGERLMRKRKESRVANPLQPFLQNPFEHRYVQGFKSCEITFERTRTFQ
AFDLGYNFEWADDTKKAERFLTDLEREFTIVMILEYFDESLVLLRRLMCW
QMKDILYDKTPKKLQSYSYKDYKPSDKERANFKEFSKVDHMLYEFFNKSL
WNKISFEGPAFYAELDYYKRLNTKLCSDKPAKRKLIKTVPSSKWHAELHI
DETFCYRLKAKRTAFLDKPLRARLVRRKKEKVSGRCNDKYIVLKCRTRKM Run BLAST on NCBI mRNA from alignment at Sc0000311:185352..187499+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90912_cuf4 ID=transcript:BL90912_cuf4|Name=transcript:BL90912_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2148bp|location=Sequence derived from alignment at Sc0000311:185352..187499+ (Branchiostoma lanceolatum)
CTTCGCTACATGTAAAGACAACATCGTTTCTTTCCTCAGCAAGTCGAGAC
TGAAGCTATTTGAAAGGTAACCATCCATGTCGACCTAATGCTAAAGGTAT
GGTCTACAGTAAATGTTGGTCTGTGAGAACTTAAAAATTGTGTGTTTTAC
GGTTTTTAAAAATGCGTGTCCTTCGTTTGTGACGTAAATTTGTACTACGT
TTAAATTTGACGATTTGTCATAGCAGTGGCAATCATAATAGACACGATGA
CACCGTACACAAATTGGTGGACTCATGTAAACGCATAAAGGCTAATCGTG
AAAGTATATGCCATAGCTTTTCTGTGTTGTTCGTGTGTCTTCTGAATGTT
CAATTTTACGCTGAAAAGGTTTGCCTCTGAACGAAGAAGAACGAAACCAA
ATGAACTACGATGCCTCTACTACGAGAACAGACCGGCTTGCTGCGATCCT
TTGTTTTGGGCACCGTGTTTGTTACAGTGTTGGCAGCCATATCTCTACTG
TTTTACGGAAGCAACAAGGAAGAACCCCGGGCAATCTGGGAAACTGCAGT
ATCTCAGCCGCCGCTAGGTGGCAGTGTTTCTCAAGCTGCAACGTTTGAAT
CGCCCGAGAAGAATCACAGTGTCGAGACACCAAGGCATTGCGCACCTCGG
AAAAACTTCATTTTTATCAAGACGCACAAGACAGGCTCTTCAAGCGTCAC
CAACCTCCTCCAGCGGTACGCTCTGTACCACAGACTTAGTCTCCAAGCAG
ACCTACGGGTTGGCAAAGACCGTATCCAACAGGCAGAAGGAGTTTTCATA
GCCAACCCAAGGTCTGCTACAACTCAAACAGGGCGGAGCATTTCTATTCA
ATAAAGGTGCCGCTGCCCCTCCTCGTTGTAATGCTAACAGCCGTACGAAT
GTCCGGGGTACTAATCTTTTTATGACCAAGCCCAGTCACCCGCGCACGTC
CCAGTGGGAGGTTCGCGCCTTGGTTGAGCCTAGTAAAAAGCTCTCACAAT
AGCAGTTTCTTTCACCCATCGGCGATGTTTGTGGCATCATGGAAAACCGT
TCTTAAGCTCCTTCTTTCAGTTGGATACGGTCTTTGCAATCTATTGGGTC
TGGTTGGAGACTACCACAGACTAACTGTCATGGTCCCTACGTGCACAGGG
TGCTCCCTGGGCTGGCCGACTTCACCCCAACCTGGGATGTACCTCAAGTC
GAAGAACAGAAAGTACAACGCTATCGTCCACCACACGAGATACAACAAAA
CCTGGATGGAGTCTATGTTTCCTCCGGACACCGCCTACATAACGGTGATC
AGGGAACCGATGAGACATCTGAAGTCAGTTTTTAATTATTACCACGGAGA
GAGGCTGATGAGAAAGAGAAAAGAATCTAGGGTTGCAAATCCTCTTCAAC
CGTTTCTACAGAACCCTTTTGAGCACAGATATGTACAGGGTTTCAAAAGT
TGCGAGATAACTTTCGAAAGGACGAGAACTTTCCAAGCCTTTGACTTAGG
TTACAACTTCGAGTGGGCAGACGACACGAAGAAAGCTGAAAGGTTTCTGA
CAGACTTGGAACGAGAATTCACAATAGTGATGATCTTAGAATACTTCGAC
GAATCGCTGGTGCTGTTACGAAGGCTAATGTGTTGGCAAATGAAAGACAT
TCTTTACGACAAAACACCGAAGAAACTACAGTCATATTCGTACAAAGACT
ATAAACCCTCCGATAAAGAGAGGGCAAATTTTAAAGAGTTTAGCAAAGTT
GATCACATGCTTTACGAATTCTTCAACAAGTCGTTATGGAACAAGATATC
TTTTGAAGGACCTGCGTTCTACGCTGAACTAGATTATTACAAGAGACTGA
ATACAAAACTTTGTTCTGATAAACCAGCGAAGAGGAAACTAATCAAGACA
GTTCCCTCATCTAAATGGCACGCAGAACTCCATATAGACGAAACATTTTG
TTACCGTTTAAAAGCGAAGAGAACGGCATTTTTGGATAAACCGTTACGAG
CTCGCTTAGTTAGGAGAAAGAAAGAGAAAGTTTCTGGTAGGTGTAACGAT
AAATACATCGTTCTTAAATGTAGGACTCGCAAAATGTAAGACATTAACTT
TTGTTTATATGGAAATTTAAAAAAATATCCATAGTTTTACTAAACCAA Coding sequence (CDS) from alignment at Sc0000311:185352..187499+ >transcript:BL90912_cuf4 ID=transcript:BL90912_cuf4|Name=transcript:BL90912_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=903bp|location=Sequence derived from alignment at Sc0000311:185352..187499+ (Branchiostoma lanceolatum)
ATGTACCTCAAGTCGAAGAACAGAAAGTACAACGCTATCGTCCACCACAC
GAGATACAACAAAACCTGGATGGAGTCTATGTTTCCTCCGGACACCGCCT
ACATAACGGTGATCAGGGAACCGATGAGACATCTGAAGTCAGTTTTTAAT
TATTACCACGGAGAGAGGCTGATGAGAAAGAGAAAAGAATCTAGGGTTGC
AAATCCTCTTCAACCGTTTCTACAGAACCCTTTTGAGCACAGATATGTAC
AGGGTTTCAAAAGTTGCGAGATAACTTTCGAAAGGACGAGAACTTTCCAA
GCCTTTGACTTAGGTTACAACTTCGAGTGGGCAGACGACACGAAGAAAGC
TGAAAGGTTTCTGACAGACTTGGAACGAGAATTCACAATAGTGATGATCT
TAGAATACTTCGACGAATCGCTGGTGCTGTTACGAAGGCTAATGTGTTGG
CAAATGAAAGACATTCTTTACGACAAAACACCGAAGAAACTACAGTCATA
TTCGTACAAAGACTATAAACCCTCCGATAAAGAGAGGGCAAATTTTAAAG
AGTTTAGCAAAGTTGATCACATGCTTTACGAATTCTTCAACAAGTCGTTA
TGGAACAAGATATCTTTTGAAGGACCTGCGTTCTACGCTGAACTAGATTA
TTACAAGAGACTGAATACAAAACTTTGTTCTGATAAACCAGCGAAGAGGA
AACTAATCAAGACAGTTCCCTCATCTAAATGGCACGCAGAACTCCATATA
GACGAAACATTTTGTTACCGTTTAAAAGCGAAGAGAACGGCATTTTTGGA
TAAACCGTTACGAGCTCGCTTAGTTAGGAGAAAGAAAGAGAAAGTTTCTG
GTAGGTGTAACGATAAATACATCGTTCTTAAATGTAGGACTCGCAAAATG
TAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000311 | genome | Sc0000311:185352..187499 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90912_cuf4 |
| Biotype | protein_coding |
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