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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90903_cuf0 >transcript:BL90903_cuf0-protein ID=transcript:BL90903_cuf0-protein|Name=transcript:BL90903_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=307bp
MGYYSSQHGYSREVSIALLSRLKVSELRIELSRRLIDKGELKTKGDMVTL
LRQKMEDEFDEWEKTKEDWVLRQEEEQGDEEEHRQMMDRLRKLRDSVSSS
GSSEEVLSDTDLVQTRHDSDRCCWEDVVIDVEDQEIDRRVCCRVLESTYG
DLLNDDVVQPEQTKELSIDRVTSVSSSDLDGVQQGTRPPGERIEVRNTVE
QGTPMRKEGKTLLIGDSNVRRLQNYFNKRASVDCQLVVSAFPGARIETIV
SKLSVLLSVQTETSQVIVHVGTNNLGKDSLKVIESKYRTLYDEVKRIQPG
CQVVFAS Run BLAST on NCBI mRNA from alignment at Sc0001806:3..1202- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90903_cuf0 ID=transcript:BL90903_cuf0|Name=transcript:BL90903_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1200bp|location=Sequence derived from alignment at Sc0001806:3..1202- (Branchiostoma lanceolatum)
AAGTCGGAGTTCATCGAATCTGTGTTCTGCCGAAAGTTTCTTTGAATTGC
AGTACAGGCGACAGGCTACGAGAAGCGTGTAAGCCCAGCAGCCCAGCAGC
GGGAGTGCAGCACGCGTCCCTTCAGGAAGATCACCAGTTTCCTGGCCGAG
ATTCTACGTACGACAGCACTACTGAATCACTTGGAATGGAAAACTGTGAG
ACTGTCTGGTTCTTTACATGTATCACACAGAATCCTTGCTTACTGGTACT
GAGAGATTTTAAATTTGAACTTTTGAAATGGGCTACTACAGTAGTCAGCA
TGGTTACAGCAGAGAGGTTTCCATAGCCCTCCTGTCGAGACTGAAGGTAT
CAGAGCTTAGGATTGAACTGTCCAGAAGGCTGATAGACAAGGGAGAGCTG
AAAACAAAGGGTGATATGGTAACCTTACTAAGACAGAAAATGGAAGATGA
ATTTGATGAGTGGGAAAAGACAAAAGAAGATTGGGTATTAAGACAGGAAG
AAGAACAAGGGGATGAAGAAGAACATAGACAGATGATGGATAGACTGCGG
AAACTGAGAGATAGTGTTAGTAGCAGTGGTAGTAGCGAGGAAGTGTTATC
TGACACTGACCTAGTGCAGACAAGACATGACAGTGATAGGTGTTGTTGGG
AAGATGTTGTAATAGATGTAGAAGACCAGGAAATTGACAGAAGGGTTTGT
TGCAGAGTACTGGAGTCCACGTATGGGGATTTGCTAAATGATGATGTGGT
TCAACCTGAACAAACAAAAGAACTATCAATAGATAGGGTTACCTCGGTAA
GCTCCAGTGATCTAGATGGCGTTCAACAAGGCACTAGACCACCTGGTGAG
AGGATAGAGGTAAGAAATACAGTAGAGCAGGGAACACCAATGAGAAAGGA
GGGAAAAACCCTGTTGATAGGAGATTCTAATGTACGCAGATTACAGAACT
ACTTTAATAAAAGAGCCAGTGTTGACTGTCAGCTTGTAGTCTCTGCATTC
CCAGGTGCAAGAATTGAAACAATTGTGTCTAAGTTGTCAGTTTTGTTATC
TGTCCAAACAGAAACAAGTCAAGTAATTGTCCATGTGGGAACTAACAACC
TCGGCAAAGACTCACTAAAAGTAATAGAGTCCAAATATAGAACTTTATAT
GATGAAGTAAAGAGGATCCAGCCTGGATGCCAGGTAGTATTTGCAAGTCT
Coding sequence (CDS) from alignment at Sc0001806:3..1202- >transcript:BL90903_cuf0 ID=transcript:BL90903_cuf0|Name=transcript:BL90903_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=921bp|location=Sequence derived from alignment at Sc0001806:3..1202- (Branchiostoma lanceolatum)
ATGGGCTACTACAGTAGTCAGCATGGTTACAGCAGAGAGGTTTCCATAGC
CCTCCTGTCGAGACTGAAGGTATCAGAGCTTAGGATTGAACTGTCCAGAA
GGCTGATAGACAAGGGAGAGCTGAAAACAAAGGGTGATATGGTAACCTTA
CTAAGACAGAAAATGGAAGATGAATTTGATGAGTGGGAAAAGACAAAAGA
AGATTGGGTATTAAGACAGGAAGAAGAACAAGGGGATGAAGAAGAACATA
GACAGATGATGGATAGACTGCGGAAACTGAGAGATAGTGTTAGTAGCAGT
GGTAGTAGCGAGGAAGTGTTATCTGACACTGACCTAGTGCAGACAAGACA
TGACAGTGATAGGTGTTGTTGGGAAGATGTTGTAATAGATGTAGAAGACC
AGGAAATTGACAGAAGGGTTTGTTGCAGAGTACTGGAGTCCACGTATGGG
GATTTGCTAAATGATGATGTGGTTCAACCTGAACAAACAAAAGAACTATC
AATAGATAGGGTTACCTCGGTAAGCTCCAGTGATCTAGATGGCGTTCAAC
AAGGCACTAGACCACCTGGTGAGAGGATAGAGGTAAGAAATACAGTAGAG
CAGGGAACACCAATGAGAAAGGAGGGAAAAACCCTGTTGATAGGAGATTC
TAATGTACGCAGATTACAGAACTACTTTAATAAAAGAGCCAGTGTTGACT
GTCAGCTTGTAGTCTCTGCATTCCCAGGTGCAAGAATTGAAACAATTGTG
TCTAAGTTGTCAGTTTTGTTATCTGTCCAAACAGAAACAAGTCAAGTAAT
TGTCCATGTGGGAACTAACAACCTCGGCAAAGACTCACTAAAAGTAATAG
AGTCCAAATATAGAACTTTATATGATGAAGTAAAGAGGATCCAGCCTGGA
TGCCAGGTAGTATTTGCAAGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001806 | genome | Sc0001806:3..1202 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90903_cuf0 |
| Biotype | protein_coding |
|
