transcript:BL90883_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL90883_cuf0
Unique Nametranscript:BL90883_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL90883_cuf0

>transcript:BL90883_cuf0-protein ID=transcript:BL90883_cuf0-protein|Name=transcript:BL90883_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=255bp
GDLKGNFTCHQPNGSSTVDYVIASQSLFQHISLFRVNPLTIFSDHNMLSV
VIRTKPFIQKNKGLNRKTKSLPKRFHWNENSAQKFLQSLSQPHIKDRLRS
LSVKESENTNNEIENYVSDFSSILRDVGFTSLGVRINKKRQQKARNKKWY
DKTCTETKRELKNLASLLEKNPSNPNVRGAFFKRKKECRKLLKKKKREFH
QHIMDKLSSLREKDPSAFWKLVKKLKPDKSEHSCQISNEEWLRHFSTVDK
SSTDA
Run BLAST on NCBI

mRNA from alignment at Sc0000311:161252..162018+

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL90883_cuf0 ID=transcript:BL90883_cuf0|Name=transcript:BL90883_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=767bp|location=Sequence derived from alignment at Sc0000311:161252..162018+ (Branchiostoma lanceolatum)
GGTGATTTAAAAGGCAATTTTACTTGTCACCAGCCGAATGGTAGTAGTAC
TGTAGATTATGTAATTGCTAGTCAGTCATTATTTCAACATATTTCTCTAT
TTCGCGTTAACCCATTAACTATATTTTCCGATCACAACATGTTATCGGTA
GTGATTCGTACAAAACCATTCATCCAAAAAAACAAAGGGTTAAATAGAAA
AACAAAGTCGCTTCCAAAACGATTTCACTGGAATGAAAATTCAGCTCAGA
AATTTCTCCAATCCCTCAGCCAACCTCATATAAAGGACAGACTACGCTCT
CTCTCTGTAAAAGAAAGTGAAAACACAAATAATGAAATTGAAAACTATGT
TTCTGACTTTAGCTCAATACTTAGGGACGTCGGGTTTACTTCATTAGGTG
TAAGAATTAACAAAAAGCGCCAACAAAAAGCTCGAAATAAGAAATGGTAC
GATAAAACCTGTACAGAAACGAAAAGAGAACTAAAAAACTTAGCTTCTCT
ACTTGAGAAAAACCCGTCGAATCCGAATGTGCGAGGGGCATTCTTTAAAA
GAAAGAAAGAGTGCAGAAAACTTTTAAAAAAGAAAAAGAGGGAATTCCAT
CAACATATCATGGACAAACTTTCTTCTCTCAGGGAAAAAGACCCCAGTGC
CTTTTGGAAATTAGTTAAGAAGCTTAAACCTGACAAATCGGAACATAGTT
GTCAAATATCAAATGAGGAATGGTTGCGACATTTTAGTACAGTAGACAAA
TCATCAACTGATGCTAT

Coding sequence (CDS) from alignment at Sc0000311:161252..162018+

>transcript:BL90883_cuf0 ID=transcript:BL90883_cuf0|Name=transcript:BL90883_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=765bp|location=Sequence derived from alignment at Sc0000311:161252..162018+ (Branchiostoma lanceolatum)
GGTGATTTAAAAGGCAATTTTACTTGTCACCAGCCGAATGGTAGTAGTAC
TGTAGATTATGTAATTGCTAGTCAGTCATTATTTCAACATATTTCTCTAT
TTCGCGTTAACCCATTAACTATATTTTCCGATCACAACATGTTATCGGTA
GTGATTCGTACAAAACCATTCATCCAAAAAAACAAAGGGTTAAATAGAAA
AACAAAGTCGCTTCCAAAACGATTTCACTGGAATGAAAATTCAGCTCAGA
AATTTCTCCAATCCCTCAGCCAACCTCATATAAAGGACAGACTACGCTCT
CTCTCTGTAAAAGAAAGTGAAAACACAAATAATGAAATTGAAAACTATGT
TTCTGACTTTAGCTCAATACTTAGGGACGTCGGGTTTACTTCATTAGGTG
TAAGAATTAACAAAAAGCGCCAACAAAAAGCTCGAAATAAGAAATGGTAC
GATAAAACCTGTACAGAAACGAAAAGAGAACTAAAAAACTTAGCTTCTCT
ACTTGAGAAAAACCCGTCGAATCCGAATGTGCGAGGGGCATTCTTTAAAA
GAAAGAAAGAGTGCAGAAAACTTTTAAAAAAGAAAAAGAGGGAATTCCAT
CAACATATCATGGACAAACTTTCTTCTCTCAGGGAAAAAGACCCCAGTGC
CTTTTGGAAATTAGTTAAGAAGCTTAAACCTGACAAATCGGAACATAGTT
GTCAAATATCAAATGAGGAATGGTTGCGACATTTTAGTACAGTAGACAAA
TCATCAACTGATGCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL90883gene:BL90883Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL90883_cuf0-E1BL90883_cuf0-E1-1564476830-432810Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL90883_cuf0transcript:BL90883_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000311genomeSc0000311:161252..162018 +
Properties
Property NameValue
Transcript idBL90883_cuf0
Biotypeprotein_coding