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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90025_cuf0 >transcript:BL90025_cuf0-protein ID=transcript:BL90025_cuf0-protein|Name=transcript:BL90025_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=440bp
HLVLCNPEEAQIMLPYMLINFMVYALPWVAVVHWQKNGNAEKLRNWEDKF
KELSRSSTDFREEIRDSRHCSMCLHFCVCFILSQVNASLKCATCHGQKGL
KWTISYFAHSVDYDLYFSGCFFVQLTYFTALFIPYIFYCKYATDLMYAID
CRIWYLRYVKHEWFGKKTPPCEILGNVNPNLRKDGWHNEIGGIANFFMTM
MICVAYILVVVYCHIYFSANPPLLDWTHNVTQVLHNAAMPIIPFLFILSS
ASKHQEENEDLVSEATTAYADARLQALSQIDNYTDVAKHSLRQWKEIVKV
LSDSKAYVVHSNLLSSHVSSRSAMYLTVLATTAAVVWQIVQHINDFKVDR
GIDDGFIEVYFVAITSVILVVVVLGVACGTGKKLTLTSCNRRHLGGVCSR
RTRKTCLIQWLFTLLLSVLTTVLLFIPWYAVYKGTKCRVG Run BLAST on NCBI mRNA from alignment at Sc0000018:2314729..2316051+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90025_cuf0 ID=transcript:BL90025_cuf0|Name=transcript:BL90025_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1323bp|location=Sequence derived from alignment at Sc0000018:2314729..2316051+ (Branchiostoma lanceolatum)
CTCACTTGGTTCTCTGCAACCCAGAAGAAGCTCAAATCATGCTGCCGTAT
ATGCTGATCAACTTTATGGTGTACGCCCTTCCATGGGTTGCCGTCGTACA
TTGGCAAAAGAACGGCAATGCCGAGAAGCTAAGAAACTGGGAAGACAAGT
TCAAGGAATTATCCCGAAGTTCGACAGATTTTAGAGAAGAGATTCGCGAT
TCGCGCCATTGTTCCATGTGTTTGCATTTTTGTGTATGTTTCATTTTGAG
CCAAGTGAATGCCAGTCTGAAATGTGCCACCTGCCACGGTCAGAAAGGGC
TGAAGTGGACCATAAGTTATTTTGCTCACAGCGTTGATTATGACCTGTAC
TTTTCTGGGTGTTTCTTTGTCCAACTCACATATTTCACAGCACTTTTCAT
CCCGTACATTTTCTACTGCAAATACGCCACGGACCTAATGTACGCCATCG
ATTGTCGAATCTGGTACCTCCGCTATGTCAAACACGAATGGTTCGGTAAA
AAGACGCCGCCTTGCGAAATACTCGGGAACGTCAACCCCAACCTGAGAAA
AGACGGTTGGCATAATGAGATTGGAGGTATTGCAAATTTCTTTATGACGA
TGATGATCTGTGTGGCGTATATTCTTGTCGTTGTCTATTGTCACATCTAC
TTTTCTGCGAACCCGCCCCTGTTAGACTGGACTCACAACGTCACACAAGT
TCTTCACAACGCAGCCATGCCCATAATTCCCTTCTTGTTCATACTATCGA
GTGCTTCAAAGCACCAAGAAGAGAACGAAGACCTAGTTTCCGAGGCTACT
ACTGCATACGCAGATGCACGGCTACAAGCTCTTTCTCAGATCGACAACTA
TACTGATGTAGCAAAACACTCTCTTAGACAGTGGAAAGAAATTGTAAAAG
TTTTGAGTGACTCTAAGGCTTATGTAGTTCACTCAAACTTACTGAGCAGT
CACGTCAGCTCTCGCTCGGCGATGTACCTAACTGTGTTGGCTACGACAGC
AGCGGTTGTTTGGCAGATCGTACAGCACATCAACGATTTCAAAGTAGATC
GGGGGATTGACGACGGATTCATAGAGGTTTATTTTGTGGCCATTACGTCT
GTGATCCTCGTAGTTGTTGTGCTTGGCGTAGCTTGTGGCACTGGGAAGAA
GTTGACACTCACAAGTTGTAACCGTCGGCACTTGGGTGGAGTTTGTTCCC
GTAGAACGAGGAAGACGTGCCTGATTCAATGGTTGTTTACATTGCTATTG
TCAGTTCTAACTACGGTGTTATTGTTCATACCTTGGTACGCTGTTTACAA
GGGTACAAAATGTAGAGTAGGAG Coding sequence (CDS) from alignment at Sc0000018:2314729..2316051+ >transcript:BL90025_cuf0 ID=transcript:BL90025_cuf0|Name=transcript:BL90025_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1320bp|location=Sequence derived from alignment at Sc0000018:2314729..2316051+ (Branchiostoma lanceolatum)
CACTTGGTTCTCTGCAACCCAGAAGAAGCTCAAATCATGCTGCCGTATAT
GCTGATCAACTTTATGGTGTACGCCCTTCCATGGGTTGCCGTCGTACATT
GGCAAAAGAACGGCAATGCCGAGAAGCTAAGAAACTGGGAAGACAAGTTC
AAGGAATTATCCCGAAGTTCGACAGATTTTAGAGAAGAGATTCGCGATTC
GCGCCATTGTTCCATGTGTTTGCATTTTTGTGTATGTTTCATTTTGAGCC
AAGTGAATGCCAGTCTGAAATGTGCCACCTGCCACGGTCAGAAAGGGCTG
AAGTGGACCATAAGTTATTTTGCTCACAGCGTTGATTATGACCTGTACTT
TTCTGGGTGTTTCTTTGTCCAACTCACATATTTCACAGCACTTTTCATCC
CGTACATTTTCTACTGCAAATACGCCACGGACCTAATGTACGCCATCGAT
TGTCGAATCTGGTACCTCCGCTATGTCAAACACGAATGGTTCGGTAAAAA
GACGCCGCCTTGCGAAATACTCGGGAACGTCAACCCCAACCTGAGAAAAG
ACGGTTGGCATAATGAGATTGGAGGTATTGCAAATTTCTTTATGACGATG
ATGATCTGTGTGGCGTATATTCTTGTCGTTGTCTATTGTCACATCTACTT
TTCTGCGAACCCGCCCCTGTTAGACTGGACTCACAACGTCACACAAGTTC
TTCACAACGCAGCCATGCCCATAATTCCCTTCTTGTTCATACTATCGAGT
GCTTCAAAGCACCAAGAAGAGAACGAAGACCTAGTTTCCGAGGCTACTAC
TGCATACGCAGATGCACGGCTACAAGCTCTTTCTCAGATCGACAACTATA
CTGATGTAGCAAAACACTCTCTTAGACAGTGGAAAGAAATTGTAAAAGTT
TTGAGTGACTCTAAGGCTTATGTAGTTCACTCAAACTTACTGAGCAGTCA
CGTCAGCTCTCGCTCGGCGATGTACCTAACTGTGTTGGCTACGACAGCAG
CGGTTGTTTGGCAGATCGTACAGCACATCAACGATTTCAAAGTAGATCGG
GGGATTGACGACGGATTCATAGAGGTTTATTTTGTGGCCATTACGTCTGT
GATCCTCGTAGTTGTTGTGCTTGGCGTAGCTTGTGGCACTGGGAAGAAGT
TGACACTCACAAGTTGTAACCGTCGGCACTTGGGTGGAGTTTGTTCCCGT
AGAACGAGGAAGACGTGCCTGATTCAATGGTTGTTTACATTGCTATTGTC
AGTTCTAACTACGGTGTTATTGTTCATACCTTGGTACGCTGTTTACAAGG
GTACAAAATGTAGAGTAGGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000018 | genome | Sc0000018:2314729..2316051 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90025_cuf0 |
| Biotype | protein_coding |
|
