transcript:BL89917_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL89917_cuf0
Unique Nametranscript:BL89917_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL89917_cuf0

>transcript:BL89917_cuf0-protein ID=transcript:BL89917_cuf0-protein|Name=transcript:BL89917_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=112bp
FDLRSAISKIRISAHPLEIEKGRYKNLPVCQRTCKYCMSNKVEDEIHFMS
SCPFYDNERNELFKDATIFHPNFSTFSDEKKTTLLLTSQNPHITEKVGSF
VFHSLGKRSRTQ
Run BLAST on NCBI

mRNA from alignment at Sc0000112:659949..660434-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL89917_cuf0 ID=transcript:BL89917_cuf0|Name=transcript:BL89917_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=486bp|location=Sequence derived from alignment at Sc0000112:659949..660434- (Branchiostoma lanceolatum)
CTTCGATTTACGCTCTGCAATTAGCAAAATTAGAATTAGTGCCCACCCCC
TTGAAATTGAGAAAGGGCGGTACAAGAACTTACCTGTGTGCCAAAGAACT
TGTAAATACTGTATGTCAAACAAGGTGGAAGACGAAATACATTTTATGTC
AAGTTGTCCATTCTACGACAACGAAAGAAATGAGCTGTTTAAAGATGCCA
CTATATTTCATCCTAATTTCTCCACGTTTTCAGACGAAAAGAAAACTACT
CTCCTCTTAACATCACAAAACCCACATATCACAGAAAAAGTGGGATCATT
CGTCTTCCACAGTCTCGGAAAAAGAAGTCGAACTCAATAAGTTAGAACTT
AGTGGCAGTAGTTAAGACTAGAGTAGACATTTGTTATACTGTTCATTATT
GTCTGTCCGTCCACTCCGTGTTACATGTACATGTACTTGCAATTAGCCTA
CGGGCAGGAATTTGCAATAAAACTTTTCATTATTAA

Coding sequence (CDS) from alignment at Sc0000112:659949..660434-

>transcript:BL89917_cuf0 ID=transcript:BL89917_cuf0|Name=transcript:BL89917_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=339bp|location=Sequence derived from alignment at Sc0000112:659949..660434- (Branchiostoma lanceolatum)
TTCGATTTACGCTCTGCAATTAGCAAAATTAGAATTAGTGCCCACCCCCT
TGAAATTGAGAAAGGGCGGTACAAGAACTTACCTGTGTGCCAAAGAACTT
GTAAATACTGTATGTCAAACAAGGTGGAAGACGAAATACATTTTATGTCA
AGTTGTCCATTCTACGACAACGAAAGAAATGAGCTGTTTAAAGATGCCAC
TATATTTCATCCTAATTTCTCCACGTTTTCAGACGAAAAGAAAACTACTC
TCCTCTTAACATCACAAAACCCACATATCACAGAAAAAGTGGGATCATTC
GTCTTCCACAGTCTCGGAAAAAGAAGTCGAACTCAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL89917gene:BL89917Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL89917_cuf0-E1BL89917_cuf0-E1-1564476830-314747Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL89917_cuf0transcript:BL89917_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000112genomeSc0000112:659949..660434 -
Properties
Property NameValue
Transcript idBL89917_cuf0
Biotypeprotein_coding