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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL89800_cuf0 >transcript:BL89800_cuf0-protein ID=transcript:BL89800_cuf0-protein|Name=transcript:BL89800_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=352bp
QILWESREQLFNLDPTGQLLNVKKDIYRFPGIAIEVLALCCQITLASTWD
VIDELKEAGKIREENATHLTVLTSISAELRLRTYLNNEGQQDSISPLIQM
KYQLKPHEVSNTTLNSVFHIPDTQVLFRYYCRAIPLKKCIPGSLQVQQKR
VLKTTILDTSNECKGRICRKLLLFDKAKHHLEAALTDTGSDTIKRSEILE
ELGTLWAFFDDSRRATSIYEESLRIRKSIYGEKTAHPDIAASLNNLGSSW
SQLGDHKNAINYYEQSLSIMKIIYVDNTAHPDVAASLNNLGSSWGELGDH
KKAVSYYEQSFMMRTKIYGDNTAHPDIAASLNNLGSSWSELGDHKKAISY
YE Run BLAST on NCBI mRNA from alignment at Sc0000043:378284..379341+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL89800_cuf0 ID=transcript:BL89800_cuf0|Name=transcript:BL89800_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1058bp|location=Sequence derived from alignment at Sc0000043:378284..379341+ (Branchiostoma lanceolatum)
GCAAATCTTATGGGAGAGCAGGGAGCAGCTTTTCAACCTCGATCCTACCG
GACAACTGTTAAACGTCAAGAAAGACATCTATCGCTTTCCAGGCATAGCA
ATTGAAGTACTTGCTCTGTGCTGTCAGATCACCCTTGCTAGTACGTGGGA
TGTCATAGATGAACTAAAAGAAGCCGGAAAGATCCGTGAAGAGAATGCCA
CCCACCTTACAGTACTGACCAGCATCTCGGCAGAGCTCCGTTTGAGAACA
TATCTGAACAACGAGGGGCAACAAGACAGTATTTCCCCTCTTATCCAAAT
GAAATACCAGTTAAAACCACATGAGGTATCTAACACTACCCTTAATTCAG
TGTTCCACATTCCGGACACCCAAGTTCTTTTTAGATACTACTGCAGGGCT
ATCCCTTTGAAGAAATGTATACCAGGCAGTTTGCAAGTTCAACAGAAAAG
AGTATTGAAAACAACAATTTTAGATACCTCCAATGAATGTAAAGGTCGAA
TATGTAGAAAACTACTTCTGTTTGATAAAGCAAAACACCATCTGGAAGCA
GCGTTAACAGATACTGGTAGCGACACGATCAAACGTTCGGAAATACTTGA
AGAATTGGGAACCCTCTGGGCCTTCTTTGATGATAGTAGAAGAGCAACTA
GCATCTATGAAGAGTCACTTAGGATACGTAAAAGTATCTATGGAGAAAAG
ACGGCCCATCCGGATATTGCCGCGTCACTAAACAATCTTGGATCATCTTG
GAGTCAACTCGGTGATCACAAGAATGCAATCAACTACTACGAACAGTCAC
TATCGATAATGAAAATTATATACGTAGACAACACGGCACATCCGGACGTT
GCCGCGTCACTAAACAACCTTGGATCGTCTTGGGGTGAACTCGGTGATCA
CAAGAAAGCAGTCAGCTACTACGAACAGTCATTCATGATGCGAACAAAAA
TCTATGGAGACAACACGGCACATCCGGATATCGCCGCGTCACTAAACAAT
CTTGGATCATCTTGGAGTGAACTCGGTGATCACAAGAAAGCAATCAGCTA
CTACGAAC Coding sequence (CDS) from alignment at Sc0000043:378284..379341+ >transcript:BL89800_cuf0 ID=transcript:BL89800_cuf0|Name=transcript:BL89800_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1056bp|location=Sequence derived from alignment at Sc0000043:378284..379341+ (Branchiostoma lanceolatum)
CAAATCTTATGGGAGAGCAGGGAGCAGCTTTTCAACCTCGATCCTACCGG
ACAACTGTTAAACGTCAAGAAAGACATCTATCGCTTTCCAGGCATAGCAA
TTGAAGTACTTGCTCTGTGCTGTCAGATCACCCTTGCTAGTACGTGGGAT
GTCATAGATGAACTAAAAGAAGCCGGAAAGATCCGTGAAGAGAATGCCAC
CCACCTTACAGTACTGACCAGCATCTCGGCAGAGCTCCGTTTGAGAACAT
ATCTGAACAACGAGGGGCAACAAGACAGTATTTCCCCTCTTATCCAAATG
AAATACCAGTTAAAACCACATGAGGTATCTAACACTACCCTTAATTCAGT
GTTCCACATTCCGGACACCCAAGTTCTTTTTAGATACTACTGCAGGGCTA
TCCCTTTGAAGAAATGTATACCAGGCAGTTTGCAAGTTCAACAGAAAAGA
GTATTGAAAACAACAATTTTAGATACCTCCAATGAATGTAAAGGTCGAAT
ATGTAGAAAACTACTTCTGTTTGATAAAGCAAAACACCATCTGGAAGCAG
CGTTAACAGATACTGGTAGCGACACGATCAAACGTTCGGAAATACTTGAA
GAATTGGGAACCCTCTGGGCCTTCTTTGATGATAGTAGAAGAGCAACTAG
CATCTATGAAGAGTCACTTAGGATACGTAAAAGTATCTATGGAGAAAAGA
CGGCCCATCCGGATATTGCCGCGTCACTAAACAATCTTGGATCATCTTGG
AGTCAACTCGGTGATCACAAGAATGCAATCAACTACTACGAACAGTCACT
ATCGATAATGAAAATTATATACGTAGACAACACGGCACATCCGGACGTTG
CCGCGTCACTAAACAACCTTGGATCGTCTTGGGGTGAACTCGGTGATCAC
AAGAAAGCAGTCAGCTACTACGAACAGTCATTCATGATGCGAACAAAAAT
CTATGGAGACAACACGGCACATCCGGATATCGCCGCGTCACTAAACAATC
TTGGATCATCTTGGAGTGAACTCGGTGATCACAAGAAAGCAATCAGCTAC
TACGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000043 | genome | Sc0000043:378284..379341 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL89800_cuf0 |
| Biotype | protein_coding |
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