|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL89702_cuf0 >transcript:BL89702_cuf0-protein ID=transcript:BL89702_cuf0-protein|Name=transcript:BL89702_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=440bp
MAAGSEWSKHHSRMPRFNMKEKTYEQYRFELECWNAVTTLGKTRRGIEIM
LSLPEGKGEDEYNTREFLSSRLSMPELTSETSFDNVLAKLDEHLRVDKTG
RLWDSFAAFDQFSRGSLTMSEYISKFDVLYNTLNKCGKVTLPASVLGLLL
VRRANLTSEESKLVMTGLDYTKETALYTQAKASLRKFSSELMSAHSSNSF
AMPMMKHEVHVAERQAFQSSRGRYVPGATGQYKPGRYNKPGRGRGGFRFQ
DGGHGSRQGRGEGTLNPRDKHGDYLRCRYCGSFRHFLEDCPDAKAEEAYV
TEAEVKLEEDEKFTVLFTHAASESKYMMSEESTEPYAVLDSACSSTVCGS
AWMDQYLSGLDKKDIMNVSREASTRVFEFGGDNTLPSLGRYRIPANVAGR
DVLITTDVVERDIPLLLSLDAMKKAGVVLNTQEDRATIFG Run BLAST on NCBI mRNA from alignment at Sc0000249:256159..257542+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL89702_cuf0 ID=transcript:BL89702_cuf0|Name=transcript:BL89702_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1384bp|location=Sequence derived from alignment at Sc0000249:256159..257542+ (Branchiostoma lanceolatum)
GACGACGTCTGCGAGTTTCCTCTGAGAATTTGTGTGTAGCTGAGTATCGG
CAGCAAGAAAAAAAATGGCGGCGGGGTCGGAATGGTCGAAGCATCACTCC
AGAATGCCGCGTTTCAACATGAAGGAGAAGACATACGAACAGTATCGGTT
CGAACTCGAATGTTGGAATGCAGTCACGACATTAGGCAAGACGAGACGGG
GCATCGAGATCATGCTCAGCCTTCCAGAAGGAAAAGGGGAGGATGAGTAC
AACACTCGTGAGTTTCTATCGTCCAGATTGAGCATGCCGGAGCTCACATC
GGAAACCAGTTTCGATAATGTTCTGGCAAAACTAGACGAGCACCTTCGTG
TTGACAAAACTGGAAGACTTTGGGACTCGTTTGCTGCGTTTGACCAGTTT
AGCCGTGGATCGCTAACGATGAGTGAGTACATCTCAAAATTTGACGTTCT
TTATAATACTCTCAACAAATGTGGCAAGGTGACCCTTCCCGCCTCCGTAC
TCGGTTTGTTGTTGGTAAGACGTGCGAATTTGACCTCTGAGGAATCGAAG
TTGGTCATGACAGGGCTCGATTACACCAAAGAGACAGCTCTATACACTCA
GGCTAAGGCAAGTTTACGTAAATTCTCCAGTGAGCTTATGTCGGCACATT
CGTCTAACTCTTTTGCCATGCCCATGATGAAACACGAGGTTCACGTGGCA
GAAAGGCAAGCATTCCAATCCTCCCGTGGGAGGTACGTACCAGGCGCCAC
AGGGCAATACAAACCAGGCCGCTACAACAAGCCAGGCAGAGGTCGAGGCG
GTTTCCGGTTTCAAGATGGCGGCCATGGAAGTAGACAGGGCCGGGGTGAG
GGGACGCTGAACCCTAGAGATAAGCATGGAGATTACTTACGTTGTCGTTA
TTGTGGGTCTTTCCGCCACTTCTTGGAAGATTGCCCGGATGCAAAGGCAG
AAGAGGCCTATGTGACGGAAGCTGAAGTTAAGTTGGAAGAAGATGAGAAG
TTTACAGTGTTGTTTACTCATGCTGCTTCCGAATCCAAGTACATGATGTC
CGAAGAGTCAACAGAGCCGTATGCTGTCCTAGATTCGGCGTGTTCTTCTA
CAGTGTGTGGCTCTGCATGGATGGATCAATACTTATCAGGTTTGGATAAG
AAAGATATAATGAATGTTTCACGAGAAGCCAGTACCCGTGTGTTCGAGTT
TGGAGGGGACAACACACTACCTTCCCTGGGCAGGTACAGGATTCCTGCAA
ACGTGGCTGGCCGAGATGTGCTGATAACGACTGATGTTGTAGAACGGGAC
ATTCCATTATTGCTGTCTTTAGATGCCATGAAGAAGGCTGGCGTAGTACT
AAACACACAGGAAGACAGGGCCACAATATTTGGC Coding sequence (CDS) from alignment at Sc0000249:256159..257542+ >transcript:BL89702_cuf0 ID=transcript:BL89702_cuf0|Name=transcript:BL89702_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1320bp|location=Sequence derived from alignment at Sc0000249:256159..257542+ (Branchiostoma lanceolatum)
ATGGCGGCGGGGTCGGAATGGTCGAAGCATCACTCCAGAATGCCGCGTTT
CAACATGAAGGAGAAGACATACGAACAGTATCGGTTCGAACTCGAATGTT
GGAATGCAGTCACGACATTAGGCAAGACGAGACGGGGCATCGAGATCATG
CTCAGCCTTCCAGAAGGAAAAGGGGAGGATGAGTACAACACTCGTGAGTT
TCTATCGTCCAGATTGAGCATGCCGGAGCTCACATCGGAAACCAGTTTCG
ATAATGTTCTGGCAAAACTAGACGAGCACCTTCGTGTTGACAAAACTGGA
AGACTTTGGGACTCGTTTGCTGCGTTTGACCAGTTTAGCCGTGGATCGCT
AACGATGAGTGAGTACATCTCAAAATTTGACGTTCTTTATAATACTCTCA
ACAAATGTGGCAAGGTGACCCTTCCCGCCTCCGTACTCGGTTTGTTGTTG
GTAAGACGTGCGAATTTGACCTCTGAGGAATCGAAGTTGGTCATGACAGG
GCTCGATTACACCAAAGAGACAGCTCTATACACTCAGGCTAAGGCAAGTT
TACGTAAATTCTCCAGTGAGCTTATGTCGGCACATTCGTCTAACTCTTTT
GCCATGCCCATGATGAAACACGAGGTTCACGTGGCAGAAAGGCAAGCATT
CCAATCCTCCCGTGGGAGGTACGTACCAGGCGCCACAGGGCAATACAAAC
CAGGCCGCTACAACAAGCCAGGCAGAGGTCGAGGCGGTTTCCGGTTTCAA
GATGGCGGCCATGGAAGTAGACAGGGCCGGGGTGAGGGGACGCTGAACCC
TAGAGATAAGCATGGAGATTACTTACGTTGTCGTTATTGTGGGTCTTTCC
GCCACTTCTTGGAAGATTGCCCGGATGCAAAGGCAGAAGAGGCCTATGTG
ACGGAAGCTGAAGTTAAGTTGGAAGAAGATGAGAAGTTTACAGTGTTGTT
TACTCATGCTGCTTCCGAATCCAAGTACATGATGTCCGAAGAGTCAACAG
AGCCGTATGCTGTCCTAGATTCGGCGTGTTCTTCTACAGTGTGTGGCTCT
GCATGGATGGATCAATACTTATCAGGTTTGGATAAGAAAGATATAATGAA
TGTTTCACGAGAAGCCAGTACCCGTGTGTTCGAGTTTGGAGGGGACAACA
CACTACCTTCCCTGGGCAGGTACAGGATTCCTGCAAACGTGGCTGGCCGA
GATGTGCTGATAACGACTGATGTTGTAGAACGGGACATTCCATTATTGCT
GTCTTTAGATGCCATGAAGAAGGCTGGCGTAGTACTAAACACACAGGAAG
ACAGGGCCACAATATTTGGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000249 | genome | Sc0000249:256159..257542 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL89702_cuf0 |
| Biotype | protein_coding |
|
