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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL89644_cuf1 >transcript:BL89644_cuf1-protein ID=transcript:BL89644_cuf1-protein|Name=transcript:BL89644_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=102bp
MLECGYSGMLAQKRKRSVYCSHLNIALFVMHCNRQDIRLCLIVFISISMG
LLSYNFHNCNCTKREYTTPKESQSYAISSYRVFVLIYYRKKRLLQILHWH
QV Run BLAST on NCBI mRNA from alignment at Sc0000273:40257..43411- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL89644_cuf1 ID=transcript:BL89644_cuf1|Name=transcript:BL89644_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3155bp|location=Sequence derived from alignment at Sc0000273:40257..43411- (Branchiostoma lanceolatum)
ATGCCGGTATGTATGGATGCATTGTCCACATCAAACCGCGTTTTTGTACC
TGTATAGCCGGTATATCCGCCCTTCAACGTAACATACCGGCTTCACTAGA
AATTAAAGTTACTACAAAGATGCATGCAATTTGATAAATGAATAAATTTT
AGGTTAGACATTTTTTTAAGGATCCGATATATGGGTTAAAGAAAAGAAAC
AACAATTGAAAACTTTGAGAAACGACGTTATGGTAAGAGAATCCGTGAGA
TGAAATAAATAAATGAACTTTATTGCTCAACAATAGTACATGGTACAATG
TATGCCATTAAATCAACAATAGTACAAGGCTATTCTATCTTACAATTCTA
AATTCTAACTACAAAATATTACATAACAGTAACGTCATATGGATTACAAT
ATAGCCATGTATGGGTATAGGAGTCGGACATGACAACAATACATACTATT
AGACATATCGTTCTGTGTACCAGATAGGGTGAAATTTGTCTTAGTAGTAA
TAGTCTGTAACAGTGCATCTCTCTCATCTCATTTATAAGTTGGACAAGTC
ATCACAAAATGGAATTCATCTTCAATATTTTCATAACATGTGGGGCACAG
TCTCTGAGTGGCTGGTGTGTCGGAATGTCGGTCAGCTCTTCTGTTGGGTG
TCTACGGTGATCTTGCCATGTTCTAATTATGTATTCAGATCACCACGGTG
TGTATGTGTGTGTGAAAGGAAACAAAGGTTCGTGCTGTGTCTGAGGCTTT
GACCTAGCTTTTGTGGGGAGAAGTGTAACAGCCGCGGTTGCACGGATAGA
AAGCGGGCCGTGTCACACCAAAACACAGCACCTCAAAACATACATAGCCT
GCTACACCGTACAGAACCAACCCTTCCCGTATCTGTCAGCAATCAGTGGA
ACTGTGCATGTATCGGAAAATCGTTTAACCTTCGGCTGGTTGAAGAGTTG
TGGAAAGAAATCGAAGGCGAAGCGGCGTGTGTCATCTATCGGTCCACGTC
CGCATACTCTACCTGATCATGGCTACAACACCGCGACAACATGCTGACAA
AAAATGGGACCACTGAGAATCGGCACGCCAATTTTTGGTGACGTATTTCT
TCGTCTTGGACACTTATTTCTTCCTTATTTCTGTCTCTCGGCGCACACAG
TTGAAGAAGTACACCTGCCAGTTTGGTTAAGCTCCCGGAAAGCTTAAGAT
GAATCAAAAGTAGTGAAGAAATATGGGATAATTTGTCGACCTAGCCAGCG
ATGTCTGTTTACTTCCGGCTATAGGAAGCACAACGTATACACGGGCATAC
AACATGCAAAAAATATAGTCGGTATATAGCTGTGCTTTTCTTAATCTATA
CAACAACATGCGAGCACAGCTTTTAGAAATATAGATACACGCCATTCTAT
AGCTACAAGTCAACGACATGTAAACACATTTTATCTCTAAATTCTAATGT
TACCTGCCAACTTTACACAACGTTAACATCAGTACAGTACATATTCTCTA
CAATGTAGATATACTTTGATATGAAACTAGTTGCCCCAAAAGATTTTACA
CGTACATAGAAACTCTTCAATATCCTGATTTTACAAGCTGTAAAATAAAC
CATAAACCATATACAAGCAGTGGTAGTTGTAGCTCATACTGCCATACAGG
TAATAATGTAGGTTTAACGTAATCACCTCTGTAAAAATCTAAACGCGGAC
AGAAGAGATCACGTTATAATCTGCGGCACATACGTACACATACATGAAAT
CCTACCCGCCAGAATCAGAGATATACACCACAGATACCAATTATACCACA
GATAATACCCACGTTGTAAACTATATAATACTTGTTTTATTAGCTGCTAA
AGGTAAAAGACTTGAGGTTATATTGGGGGGATTTTATTGGGAAAGGGCGG
CAATGTTATTGACACATATCCCAGTACATGTAGCGGAGTGTGAACGAAAT
GTTGACTTGAAGAAAAACAAAATGGAGGCATGACTGGAGACTCGAATATT
TCTTAGAACATTTGTACCTTTGATATCATCATAGCAGGTTTGGTCACTAT
CAGACCTCAGTATTTGAAGTATTATTTTCAATCTGTATACAAATATTGAG
CTCTTTTCTTTCTGTCTTTGCAGTCCCAGCATCTGGAAGATCATGGAATA
CTGTAGTATATGTGTACGTGTCTAGTAACAATTCAGTGAGGCACTTCAAC
TCTGACAGAAATTGAACACACTCTAAACTCCACCGAATAGAATTTGTAAT
CTCACTAAAGACACATGTTTTGACAATGTATATAAATACATGTATTCATA
CATGCAGTTCAAGACAATTTAGTAACATATTTACAGAGAAACTTGCGACC
ACTATCGTAGATTTAGTCCAAATAATGCAGGCCTAGGCTTCGAAGTCAAC
ATGATCCTCAATATTATGAGAACTCTAAAAAGAACTGTTTTTTTGCCATT
TGATTGCAGCTAATAGATTATTATCATCTATTGTCGATGAAATTATATCC
TCTAGAAGGCTACAATCAAAACTCACGGCTGATATGTGATTGTGTTTANT
GATATGTGCTTGTGTTTAGAAATTCTTGCAAGTTTGACGTTGCTATGTAT
AGGCTAGTGACCTATTCTGTATGTTAGAATGCGGATATTCGGGGATGTTA
GCTCAAAAGAGAAAGAGATCTGTCTATTGTTCTCATCTAAACATAGCATT
GTTTGTTATGCATTGTAACAGACAAGATATCCGGCTATGTCTAATTGTGT
TCATTTCAATTTCTATGGGTCTTTTAAGTTATAATTTTCATAACTGTAAT
TGTACTAAGAGAGAATATACCACACCGAAAGAGAGTCAGTCTTATGCGAT
CAGTTCATATAGAGTTTTCGTGCTAATTTATTACAGAAAAAAAAGACTAT
TGCAGATATTGCATTGGCACCAAGTCTAATATTTTTAGCATTGGAATCGC
CATTGTTACATATTCTCTTGCTTCTAAATGTAGTAGCTTCTACCTGAGCT
GCAGAACACAGTGGATCATCATCATCTAAATGTAGTGTTAGTTCTTGATT
GTATGGACTGTAGTGTTGTTTCTCTACATTGTAAGTTAAGAATCATGGCA
CCGATAGATATAGCAGACTTTAGTAACATAACATGGTTGCGGTAAATGAA
TAAAC Coding sequence (CDS) from alignment at Sc0000273:40257..43411- >transcript:BL89644_cuf1 ID=transcript:BL89644_cuf1|Name=transcript:BL89644_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=309bp|location=Sequence derived from alignment at Sc0000273:40257..43411- (Branchiostoma lanceolatum)
ATGTTAGAATGCGGATATTCGGGGATGTTAGCTCAAAAGAGAAAGAGATC
TGTCTATTGTTCTCATCTAAACATAGCATTGTTTGTTATGCATTGTAACA
GACAAGATATCCGGCTATGTCTAATTGTGTTCATTTCAATTTCTATGGGT
CTTTTAAGTTATAATTTTCATAACTGTAATTGTACTAAGAGAGAATATAC
CACACCGAAAGAGAGTCAGTCTTATGCGATCAGTTCATATAGAGTTTTCG
TGCTAATTTATTACAGAAAAAAAAGACTATTGCAGATATTGCATTGGCAC
CAAGTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000273 | genome | Sc0000273:40257..43411 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL89644_cuf1 |
| Biotype | protein_coding |
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