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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL89582_cuf0 >transcript:BL89582_cuf0-protein ID=transcript:BL89582_cuf0-protein|Name=transcript:BL89582_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=299bp
MGKRPRRSRGSSGTDESSSSPKSYPPPKTVKMAADTGIEENLQSLSPELQ
TLAQLILKQTKEQQETLLSQFQDVGEKLSGQISTLDNKVEGLSADLTKLR
ERVGATENVAEFQAAEILDLRRALDEERRERLKADLLAERYSRKADIIIR
GLPYRNDENSEQLFAEFLAGKLHLDPVPVAAVHRLARPTKTRPNPPLLAR
LLNFHDRDRIIREGRKLRRNKEGLAVFEHLPPPLMAARASLVPDRNAAIE
KAKGTDVKVSIWVPPKATYAILLVNGQEKKRVDAVDIMLSPKKGSLPNT Run BLAST on NCBI mRNA from alignment at Sc0000290:112462..115413- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL89582_cuf0 ID=transcript:BL89582_cuf0|Name=transcript:BL89582_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2952bp|location=Sequence derived from alignment at Sc0000290:112462..115413- (Branchiostoma lanceolatum)
CATGCAAATGACTTACACATGTGCATACTATATGCTTGGTCATGAACACC
TTTATCTACCTTACATGTTGCAATATTGACAGTCCTATAATTTTCAAATT
AGATGAATTATGTATCTTGCATTGATTATGCAAATTAGGAATTTATTTGC
ATAATTGGTATCTGTTGATGCTCCACTTTCCATAAAATACATATGTTACA
TGTATTTGAGCCTGATAATGGAAAACACTGCAAATATAGATAATCCTCAT
TAGCTATGCAAATTAAGTTACAATTAGCATAATTTGCACTTCACTATGTA
TATCTCTCTCCAAGCTACCTGCATACTAAGTATCATATTGACAGTCCTAT
AATTTTCCAATTAGATGAGATATGGTGTTTTTCATTAATTATGCAAATTA
GGAATCTATTTGCATAATTGGTACCTGTTGATGATCCACTTTCCATAAAC
TACATATGTTACATGTATTTGAGTCTGATAATGGAAAACACTGAAAATAT
AGATTTTCCTCGTTAGATATGCAAATTACGTCCCAATTAGCATAATTTGT
ACTTCATTTTGTATATCTCTATCTGAGCTACCTACATACTAAATATCATG
GAAATCCGTTGTTCCTTTGTTCAGTTATTCTCCATAGAAGATTTTCAAAA
AGCTTTTCATGCAGGATATGAATCCAAGATGGCGGCCCTAGGCTAGGTGT
GTGAAAGTGTGCTCCAAACAATTTTTACTTTCCACGCGTAACGGGCCTAC
ACAGAGCTGAAATTATACCTGTCCGTTGTCAGCCGGAGACTGTATCGTGT
TTTCTTTGATGGGTAAGAGACCTAGACGCTCGAGGGGTTCCAGTGGAACG
GATGAAAGCAGCTCATCTCCAAAAAGCTACCCCCCACCCAAGACAGTAAA
GATGGCGGCAGATACAGGCATTGAGGAAAATCTACAGTCTTTGTCTCCGG
AACTACAGACACTCGCGCAGCTTATTCTGAAGCAGACTAAAGAACAGCAG
GAGACTCTACTAAGTCAGTTCCAGGACGTTGGGGAAAAACTGTCAGGCCA
AATTAGCACTTTGGACAATAAAGTCGAAGGTTTGTCTGCGGACTTAACCA
AGTTACGAGAGCGAGTGGGAGCTACGGAGAATGTCGCGGAGTTCCAAGCA
GCGGAAATTCTGGATTTACGCAGAGCTTTGGACGAGGAACGCCGTGAAAG
ACTGAAAGCAGACTTATTGGCTGAGCGCTACTCTAGGAAAGCAGATATAA
TCATACGGGGACTGCCATATAGAAATGACGAGAACTCGGAGCAGTTATTT
GCGGAATTTTTGGCGGGAAAGCTACACCTGGACCCGGTACCAGTTGCAGC
AGTTCACCGGCTTGCAAGGCCAACGAAAACAAGACCCAACCCACCCCTGC
TTGCCAGACTTCTGAACTTTCATGACCGAGATCGGATTATACGGGAGGGG
AGAAAGCTACGACGGAACAAGGAGGGCCTAGCCGTGTTTGAACATCTTCC
CCCGCCACTGATGGCTGCGAGAGCTAGCTTGGTTCCGGATCGGAATGCTG
CAATAGAAAAAGCCAAAGGTACGGATGTTAAAGTTTCGATATGGGTGCCC
CCTAAGGCTACTTATGCGATCCTACTTGTGAATGGGCAGGAAAAGAAACG
TGTTGATGCTGTAGACATCATGTTGTCTCCTAAGAAGGGATCGCTGCCGA
ACACTTAAGGGCTAACCCGTTGTTTACAAGTGACTGAAGAGATTAAACAC
GCACTTTTTCCTCATTGAGGCTCAGGTGTTTTTTATTGCTGTGTAAACAA
TGAATCGGATGTGTCAGGTCAGAATGGTTGATTTACCTTACTGCATGGTG
TGGATCACAGGTAGTAACAAATATGCGGCGGTTTTGAATAATTGGAATTT
GTACATACACTTGCAGGTAAAAACAATTAGGGGAACACCTGCTGCCCCTT
GGCTCATGGAAACATCAACCTTTGATTGACCGCAAGCCGAGCCAGGCATT
TTTGTTACTATCTGTATGCAGAAATCATTTTTGTTCCTTATTTGCCAAAA
TCTACACTTTCAAGAGTGATTAGGTTATGTTGTCTTTATCTCTACACTCG
ACCATTATATTTATTTTGAGTGATGTACGATGATCATATTGTGTTTCAAA
TTTATTTTCTTTATGCTGTCATGTTCTGATAGATTTTTTTCTGTTTTGAT
TTATGCCTGGTTTGTTATTGTTATGAATCTATGTTTTCTACCTCCCCATG
GGTAGAAAAATTCTGACCAGGAAATTGATTTGAATTAATCTTTCTGTTTA
CCTTGGTTTATATTTATACAGTTTATTTTCCTATTGTAAAAGTGGAATAT
AATTTATTTGTACCACATGGAGCTAGTTAGAGAGACCACCAACCATATAG
AGTTTAATGTTTTGGAATTTTGGTGGTGTTTATGTTGTTTTCTTAGTTAT
GTGGAACCATCCAACAATAATTTCCTCCAGTTCTATGATCTTCATTTCAA
CCTTAAGTGCATATAATTATACTTATGTTCTGATTTGTACATCCTTAGTT
TTGTCATATATTATGTCTACCAATTATGTTAACCGTTTTTCAGTTCTGTT
TGTTATAGATATCATTTTACTATGCCCCTTTGCCCAGCATGACATCCAAT
TTTTTAGGACACTCCCAACCAACCATGACTCAAGTAGAAATTCAGATTTG
TAGTTACAACTGTAATGGACTTAGAGATTCTGTTAAACGTAGGGGGGTAT
TCACCTGGTTAAAAGACAAACCATACCACATAATATGCCTTCAGGAGACA
CATTCTACATTGTTAGAGGAAAATAGATGGCAAAATGAGTGGGGGGGATC
CATGTTTTTCTCACACGGTACCCCCAGTCAAAGAGGTACAGCCATCCTTT
TTAGAGACAATATCAATTTTTGTATTAACCAGACTAAAAATGACTGTTTG
GG Coding sequence (CDS) from alignment at Sc0000290:112462..115413- >transcript:BL89582_cuf0 ID=transcript:BL89582_cuf0|Name=transcript:BL89582_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=900bp|location=Sequence derived from alignment at Sc0000290:112462..115413- (Branchiostoma lanceolatum)
ATGGGTAAGAGACCTAGACGCTCGAGGGGTTCCAGTGGAACGGATGAAAG
CAGCTCATCTCCAAAAAGCTACCCCCCACCCAAGACAGTAAAGATGGCGG
CAGATACAGGCATTGAGGAAAATCTACAGTCTTTGTCTCCGGAACTACAG
ACACTCGCGCAGCTTATTCTGAAGCAGACTAAAGAACAGCAGGAGACTCT
ACTAAGTCAGTTCCAGGACGTTGGGGAAAAACTGTCAGGCCAAATTAGCA
CTTTGGACAATAAAGTCGAAGGTTTGTCTGCGGACTTAACCAAGTTACGA
GAGCGAGTGGGAGCTACGGAGAATGTCGCGGAGTTCCAAGCAGCGGAAAT
TCTGGATTTACGCAGAGCTTTGGACGAGGAACGCCGTGAAAGACTGAAAG
CAGACTTATTGGCTGAGCGCTACTCTAGGAAAGCAGATATAATCATACGG
GGACTGCCATATAGAAATGACGAGAACTCGGAGCAGTTATTTGCGGAATT
TTTGGCGGGAAAGCTACACCTGGACCCGGTACCAGTTGCAGCAGTTCACC
GGCTTGCAAGGCCAACGAAAACAAGACCCAACCCACCCCTGCTTGCCAGA
CTTCTGAACTTTCATGACCGAGATCGGATTATACGGGAGGGGAGAAAGCT
ACGACGGAACAAGGAGGGCCTAGCCGTGTTTGAACATCTTCCCCCGCCAC
TGATGGCTGCGAGAGCTAGCTTGGTTCCGGATCGGAATGCTGCAATAGAA
AAAGCCAAAGGTACGGATGTTAAAGTTTCGATATGGGTGCCCCCTAAGGC
TACTTATGCGATCCTACTTGTGAATGGGCAGGAAAAGAAACGTGTTGATG
CTGTAGACATCATGTTGTCTCCTAAGAAGGGATCGCTGCCGAACACTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000290 | genome | Sc0000290:112462..115413 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL89582_cuf0 |
| Biotype | protein_coding |
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