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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88968_cuf0 >transcript:BL88968_cuf0-protein ID=transcript:BL88968_cuf0-protein|Name=transcript:BL88968_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=218bp
FDIVLLFSFLLRVFLACTCGRQVVQGECVTTDLTAAGGVTKHDLRVLHGL
IAFINIAVPPATMNRLQRTTLAVASVLLGGLDLALADSSCSLGKKIPVFG
CTPNVLGMVAACLFVLILLTIGCCFFRGCRSSKKPKKRPITTVTGSPSLE
AATTATFPVAPPPYSQEERPYTGARLCLVRPYPGAVPLSENQPQPVPGGP
STWTEPPPPYSPETKVPL Run BLAST on NCBI mRNA from alignment at Sc0000108:167822..170035+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88968_cuf0 ID=transcript:BL88968_cuf0|Name=transcript:BL88968_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2214bp|location=Sequence derived from alignment at Sc0000108:167822..170035+ (Branchiostoma lanceolatum)
CTTTGATATTGTTCTTTTGTTTTCTTTTTTGCTTAGAGTCTTTTTAGCGT
GTACTTGCGGTCGCCAGGTAGTACAAGGAGAGTGCGTCACGACTGACCTG
ACGGCCGCTGGCGGAGTTACAAAACATGATTTGAGAGTTTTGCATGGTTT
GATCGCGTTCATAAACATAGCCGTGCCTCCAGCCACGATGAATAGACTAC
AGCGAACGACGCTAGCTGTTGCGTCGGTGCTGTTGGGAGGTCTGGACTTG
GGTAAGTTGTGGTTATGTTAGGTTACGTTTTCAACAACACGGATTTTACA
CAACACAAGACTTAAGACTTAGGTCTCTGAAATTGGGTCAAACTAGTTGG
TCTCTAGATCGATCATTCAAGTGGGAATAAGCAACAGCTTTAGCTGGGAA
GTACCCATGAATAAGCAGCCTATTTTGTTCTTAAAGTTTACATAAACCTG
AGCTCTTTAAGGCTTGTTTCAGGTGTTTTGAAACGCCCACAAATTTAAGG
GCGATTTAACAACGCATTGGTTGGACTGGTGTGAGCCCGTCCATGTTTAA
CACTGGTTCATGGACAAGACTAATCTTAGTGTAGCACCTTTGTCACTATG
TCTGTCTCTCTCAGAGAAAACCTTTAGATTAAGCTCGGGGACGTGCTTGA
AATACTACTAATAAGCCAATTGTCAGTGGACTGTTTTGAGGTAATCAGTA
TCAAAGAACTGCCGTCACAACAGGTTGCAGGTAACGAACTAGTTACAGGA
AGTGTTCGTGAAGATTGTTGGATTTTCTTATGGTACCGGTATCAACTACT
GGCCTTATGATATCATACTGGTAAACTTTTGTCCAACCAAATGTATTTAT
TGTTCCTTCCACATGAATCAGCATTAGCAGATTCATCATGTTCCCTTGGG
AAGAAGATCCCAGTCTTCGGCTGCACTCCTAATGTCCTGGGCATGGTGGC
TGCATGTTTGTTCGTCCTGATCCTCCTGACTATCGGCTGCTGCTTCTTCA
GGGGTTGTAGGTCATCCAAAAAGCCAAAGAAAAGGCCTATCACAACTGTA
ACAGGTAATCTCTTTAACCTTCTCCCTGCTGCCTAAGTCTAGATCTGTAA
CCAATCGGGAACCAGGTGCCAAACGACAACTTTAGTGTGCTAAAAGTTAA
ATGGGTCTGAAATTTATAGTCAATTCGGTATCCTGGAGTAACGTAGTTTA
ATAATCCTAGCTTTATTTTTTAGTCTCATTCTCACTTTGCTGCTATTTTC
TTGAACCAGCTAAATTTGCTTCAAGCTGACATGCTATTTAATGTCACATA
TATTTCATTACTAAGGTTCCCCGAGTTTGGAGGCAGCTACAACAGCAACA
TTTCCCGTGGCACCACCACCCTACTCCCAGGAAGAGAGGCCCTACACAGG
GGCAAGGCTTTGCCTTGTTCGACCGTATCCTGGTGCCGTGCCCCTCAGTG
AGAATCAACCCCAGCCAGTACCGGGCGGCCCTTCCACTTGGACTGAGCCT
CCTCCACCATATTCACCGGAAACTAAAGTACCTCTGTGATGTTACAACAT
GATCAACCATTAACTAATAGTAATAGCTTAGTGTCGCCACAGGAAGAATT
ACTTGAAGTTTGTTTCTTGTTTGATTGATTTGATAGCTTAGAAAGTTATA
CATAGATTTTTATTACTATTATACAGATATGAGGGATTATATTCTTGGTA
GTATGTGTATCAAGATGCAGAATTTTAAAAGCCATTGACTATTCTATGAA
CTAGGTAAATCATGCACCTAGCAGCTTTTCTCCAAACTACATTAGTCACA
AACATGTTAATTTTCTTCCCATGAAATTTACCTGCTGGATTCAGGGAATT
TATAATACTGACTTCAGTGGAGGTCTAGTTCTAGTTTTTCCATTCTAAGG
TTGCTGTACATTTTTGTTACCTTCGCTGAGAAGGTTATTTACTACTAAAT
ACTGTTAATGATCATACTTCTTCACCATATTATACATTTTATTATTGTAC
ATATGTGTGCACTGAAAAGCGTGGTTTGTACCTAATAAGCATATCGAAAC
TAAAGAGGGACCAAGGTGAAGTTAATAATAACTTAATACTCAGAATTCTT
TGTCACCAAAAATCTTTTTATTTTATATTTTGGTGAGGAGGAGTTCTATA
TATGTCAAGATACAATGTATTTCTATTTCCAAATAAAGAAATTGATGGGA
ACCAATTAGAAAGT Coding sequence (CDS) from alignment at Sc0000108:167822..170035+ >transcript:BL88968_cuf0 ID=transcript:BL88968_cuf0|Name=transcript:BL88968_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1971bp|location=Sequence derived from alignment at Sc0000108:167822..170035+ (Branchiostoma lanceolatum)
TTTGATATTGTTCTTTTGTTTTCTTTTTTGCTTAGAGTCTTTTTAGCGTG
TACTTGCGGTCGCCAGGTAGTACAAGGAGAGTGCGTCACGACTGACCTGA
CGGCCGCTGGCGGAGTTACAAAACATGATTTGAGAGTTTTGCATGGTTTG
ATCGCGTTCATAAACATAGCCGTGCCTCCAGCCACGATGAATAGACTACA
GCGAACGACGCTAGCTGTTGCGTCGGTGCTGTTGGGAGGTCTGGACTTGG
CATTAGCAGATTCATCATGTTCCCTTGGGAAGAAGATCCCAGTCTTCGGC
TGCACTCCTAATGTCCTGGGCATGGTGGCTGCATGTTTGTTCGTCCTGAT
CCTCCTGACTATCGGCTGCTGCTTCTTCAGGGGTTGTAGGTCATCCAAAA
AGCCAAAGAAAAGGCCTATCACAACTGTAACAGGTTCCCCGAGTTTGGAG
GCAGCTACAACAGCAACATTTCCCGTGGCACCACCACCCTACTCCCAGGA
AGAGAGGCCCTACACAGGGGCAAGGCTTTGCCTTGTTCGACCGTATCCTG
GTGCCGTGCCCCTCAGTGAGAATCAACCCCAGCCAGTACCGGGCGGCCCT
TCCACTTGGACTGAGCCTCCTCCACCATATTCACCGGAAACTAAAGTACC
TCTGTGATTTGATATTGTTCTTTTGTTTTCTTTTTTGCTTAGAGTCTTTT
TAGCGTGTACTTGCGGTCGCCAGGTAGTACAAGGAGAGTGCGTCACGACT
GACCTGACGGCCGCTGGCGGAGTTACAAAACATGATTTGAGAGTTTTGCA
TGGTTTGATCGCGTTCATAAACATAGCCGTGCCTCCAGCCACGATGAATA
GACTACAGCGAACGACGCTAGCTGTTGCGTCGGTGCTGTTGGGAGGTCTG
GACTTGGCATTAGCAGATTCATCATGTTCCCTTGGGAAGAAGATCCCAGT
CTTCGGCTGCACTCCTAATGTCCTGGGCATGGTGGCTGCATGTTTGTTCG
TCCTGATCCTCCTGACTATCGGCTGCTGCTTCTTCAGGGGTTGTAGGTCA
TCCAAAAAGCCAAAGAAAAGGCCTATCACAACTGTAACAGGTTCCCCGAG
TTTGGAGGCAGCTACAACAGCAACATTTCCCGTGGCACCACCACCCTACT
CCCAGGAAGAGAGGCCCTACACAGGGGCAAGGCTTTGCCTTGTTCGACCG
TATCCTGGTGCCGTGCCCCTCAGTGAGAATCAACCCCAGCCAGTACCGGG
CGGCCCTTCCACTTGGACTGAGCCTCCTCCACCATATTCACCGGAAACTA
AAGTACCTCTGTGATTTGATATTGTTCTTTTGTTTTCTTTTTTGCTTAGA
GTCTTTTTAGCGTGTACTTGCGGTCGCCAGGTAGTACAAGGAGAGTGCGT
CACGACTGACCTGACGGCCGCTGGCGGAGTTACAAAACATGATTTGAGAG
TTTTGCATGGTTTGATCGCGTTCATAAACATAGCCGTGCCTCCAGCCACG
ATGAATAGACTACAGCGAACGACGCTAGCTGTTGCGTCGGTGCTGTTGGG
AGGTCTGGACTTGGCATTAGCAGATTCATCATGTTCCCTTGGGAAGAAGA
TCCCAGTCTTCGGCTGCACTCCTAATGTCCTGGGCATGGTGGCTGCATGT
TTGTTCGTCCTGATCCTCCTGACTATCGGCTGCTGCTTCTTCAGGGGTTG
TAGGTCATCCAAAAAGCCAAAGAAAAGGCCTATCACAACTGTAACAGGTT
CCCCGAGTTTGGAGGCAGCTACAACAGCAACATTTCCCGTGGCACCACCA
CCCTACTCCCAGGAAGAGAGGCCCTACACAGGGGCAAGGCTTTGCCTTGT
TCGACCGTATCCTGGTGCCGTGCCCCTCAGTGAGAATCAACCCCAGCCAG
TACCGGGCGGCCCTTCCACTTGGACTGAGCCTCCTCCACCATATTCACCG
GAAACTAAAGTACCTCTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000108 | genome | Sc0000108:167822..170035 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88968_cuf0 |
| Biotype | protein_coding |
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