transcript:BL88907_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL88907_cuf0
Unique Nametranscript:BL88907_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL88907_cuf0

>transcript:BL88907_cuf0-protein ID=transcript:BL88907_cuf0-protein|Name=transcript:BL88907_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=161bp
VHTLQVGVHTLQVGVHTLQVGVHTLQVGVHTLQVGVHTLQVRVHTLQVGV
HTLQVGVHTLQVGVHTLQVGVHTLQVGVHTLQVGVHTLQVGVHTLQVGVH
TLQVGVHTLQVGVHTLQVGVHTLQVGVHTLQVGVHTLQVGVHTLQVGVHT
LQVGVHTLQVG
Run BLAST on NCBI

mRNA from alignment at Sc0000207:445344..445826+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL88907_cuf0 ID=transcript:BL88907_cuf0|Name=transcript:BL88907_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=483bp|location=Sequence derived from alignment at Sc0000207:445344..445826+ (Branchiostoma lanceolatum)
GTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATAC
GCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAG
TCGGGGTACATACGCTACAAGTCAGGGTACATACGCTACAAGTCGGGGTA
CATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCT
ACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCG
GGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACAT
ACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACA
AGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGG
TACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACG
CTACAAGTCGGGGTACATACGCTACAGGTCGGG

Coding sequence (CDS) from alignment at Sc0000207:445344..445826+

>transcript:BL88907_cuf0 ID=transcript:BL88907_cuf0|Name=transcript:BL88907_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=483bp|location=Sequence derived from alignment at Sc0000207:445344..445826+ (Branchiostoma lanceolatum)
GTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATAC
GCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAG
TCGGGGTACATACGCTACAAGTCAGGGTACATACGCTACAAGTCGGGGTA
CATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCT
ACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCG
GGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACAT
ACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACA
AGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGG
TACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACG
CTACAAGTCGGGGTACATACGCTACAGGTCGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL88907gene:BL88907Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL88907_cuf0-E1BL88907_cuf0-E1-1564476830-388634Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL88907_cuf0transcript:BL88907_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000207genomeSc0000207:445344..445826 +
Properties
Property NameValue
Transcript idBL88907_cuf0
Biotypeprotein_coding