|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88881_cuf0 >transcript:BL88881_cuf0-protein ID=transcript:BL88881_cuf0-protein|Name=transcript:BL88881_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=342bp
DVICIQETWLDSFVDFNLLGYSIFSSNRTRNKRAKRNSGGVAIIFKSSFQ
KGITKLDSSSPDSIWCKFDKQFFGLVNDLYLCNIYIPPESFPKSSQIDPF
DTLSSNIYKFSNLGDIVILGDLNARTGAITETYFNTDLPDVITADVVASF
KDRNNRDVKVNHYGRCLIDLCSSADLTILNGRCAGDLKGDFTCYHYNGSS
VVDYCIAQRSMLSDIQYVNVSPISQFSDHCHISFSLATKHAPLIITGARP
AKPEPISFIWDANSNELFSAIINGTETNSKLRDFCQESFCSAESAVTHFS
KVLLDASKSSLKIRRTKQAKKLYTKKRIKFGSTNVAGRYANV Run BLAST on NCBI mRNA from alignment at Sc0000286:267323..268458+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88881_cuf0 ID=transcript:BL88881_cuf0|Name=transcript:BL88881_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1136bp|location=Sequence derived from alignment at Sc0000286:267323..268458+ (Branchiostoma lanceolatum)
CGACGTGATATGTATTCAAGAAACGTGGTTAGATAGTTTCGTAGACTTTA
ATTTATTAGGTTATAGTATTTTTAGTAGTAATAGAACAAGGAACAAAAGA
GCTAAGCGAAATTCTGGAGGAGTTGCAATTATTTTCAAGAGTTCATTCCA
AAAGGGCATTACAAAACTTGACAGTAGCTCACCTGACTCTATCTGGTGCA
AGTTTGACAAACAGTTTTTTGGCCTTGTAAACGATTTGTATCTCTGTAAC
ATTTACATTCCCCCTGAATCATTTCCCAAATCTTCTCAAATTGATCCTTT
TGATACATTGTCTAGCAATATTTACAAATTCTCAAATTTAGGGGACATTG
TTATTTTAGGTGATCTAAACGCCAGAACAGGAGCAATTACAGAAACATAC
TTTAATACCGATCTCCCAGATGTAATTACAGCGGACGTAGTCGCTAGTTT
TAAAGATAGAAATAATAGAGATGTTAAAGTTAACCATTATGGTAGATGTT
TGATTGACTTATGTTCCTCAGCTGATTTGACTATCTTAAATGGAAGATGT
GCTGGAGATTTAAAGGGTGACTTCACATGTTACCATTACAATGGGTCCAG
TGTTGTTGACTATTGCATAGCCCAACGGTCAATGCTTTCTGATATTCAAT
ATGTCAACGTCAGTCCAATTTCACAATTTTCTGACCATTGTCATATATCT
TTTTCCTTGGCAACCAAACACGCCCCTCTTATCATAACAGGGGCGCGCCC
AGCTAAACCAGAACCTATATCATTTATTTGGGATGCAAATTCAAATGAAT
TGTTTTCGGCCATTATAAATGGAACTGAAACAAACTCAAAATTAAGAGAC
TTCTGCCAAGAAAGTTTTTGCTCAGCAGAAAGTGCTGTCACACATTTTTC
AAAAGTTTTATTAGATGCTTCAAAAAGTTCCCTCAAAATTCGGCGTACAA
AACAGGCCAAAAAATTATACACAAAAAAAAGAATAAAGTTTGGTTCGACC
AACGTTGCTGGTCGCTACGCCAACGTTTGAAACGATTATCACTAGAATTG
AGAAAAGAACCATGGATTCATGAAACCAGAATAAAATACTTTACGGCCTT
AAAAGATTATAAAAAGCTTATTAAACAATGTAAACG Coding sequence (CDS) from alignment at Sc0000286:267323..268458+ >transcript:BL88881_cuf0 ID=transcript:BL88881_cuf0|Name=transcript:BL88881_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1029bp|location=Sequence derived from alignment at Sc0000286:267323..268458+ (Branchiostoma lanceolatum)
GACGTGATATGTATTCAAGAAACGTGGTTAGATAGTTTCGTAGACTTTAA
TTTATTAGGTTATAGTATTTTTAGTAGTAATAGAACAAGGAACAAAAGAG
CTAAGCGAAATTCTGGAGGAGTTGCAATTATTTTCAAGAGTTCATTCCAA
AAGGGCATTACAAAACTTGACAGTAGCTCACCTGACTCTATCTGGTGCAA
GTTTGACAAACAGTTTTTTGGCCTTGTAAACGATTTGTATCTCTGTAACA
TTTACATTCCCCCTGAATCATTTCCCAAATCTTCTCAAATTGATCCTTTT
GATACATTGTCTAGCAATATTTACAAATTCTCAAATTTAGGGGACATTGT
TATTTTAGGTGATCTAAACGCCAGAACAGGAGCAATTACAGAAACATACT
TTAATACCGATCTCCCAGATGTAATTACAGCGGACGTAGTCGCTAGTTTT
AAAGATAGAAATAATAGAGATGTTAAAGTTAACCATTATGGTAGATGTTT
GATTGACTTATGTTCCTCAGCTGATTTGACTATCTTAAATGGAAGATGTG
CTGGAGATTTAAAGGGTGACTTCACATGTTACCATTACAATGGGTCCAGT
GTTGTTGACTATTGCATAGCCCAACGGTCAATGCTTTCTGATATTCAATA
TGTCAACGTCAGTCCAATTTCACAATTTTCTGACCATTGTCATATATCTT
TTTCCTTGGCAACCAAACACGCCCCTCTTATCATAACAGGGGCGCGCCCA
GCTAAACCAGAACCTATATCATTTATTTGGGATGCAAATTCAAATGAATT
GTTTTCGGCCATTATAAATGGAACTGAAACAAACTCAAAATTAAGAGACT
TCTGCCAAGAAAGTTTTTGCTCAGCAGAAAGTGCTGTCACACATTTTTCA
AAAGTTTTATTAGATGCTTCAAAAAGTTCCCTCAAAATTCGGCGTACAAA
ACAGGCCAAAAAATTATACACAAAAAAAAGAATAAAGTTTGGTTCGACCA
ACGTTGCTGGTCGCTACGCCAACGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000286 | genome | Sc0000286:267323..268458 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88881_cuf0 |
| Biotype | protein_coding |
|
