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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88752_cuf0 >transcript:BL88752_cuf0-protein ID=transcript:BL88752_cuf0-protein|Name=transcript:BL88752_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=111bp
MLPGAACYFFMWFSPDIVSPTGKLMWYLLFYGGYQVIMAGFLNARSALVM
YATQEPRERDILNTYSSAFGIAASLLGLLLQQGTFTLFHADLGYNPCGNG
THNGTGYGSTR Run BLAST on NCBI mRNA from alignment at Sc0000101:297100..299910+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88752_cuf0 ID=transcript:BL88752_cuf0|Name=transcript:BL88752_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2811bp|location=Sequence derived from alignment at Sc0000101:297100..299910+ (Branchiostoma lanceolatum)
GTTCACCTTGGTGTAATTTTCTATGGTACATAATGAATCACTTGGTTATG
TTTCCTTTACATGTACAAACATTAACATATGCGGTATGAATCCTATTTCC
AGGTTACTATCATATAATGTTCAATAGGCGCTGAGCNCTTCATCGTCGGA
TTCCTGGTGGACGCAACCAACACGAGATGGGGGAAGCTGAAACCATGGTA
GGTCGATCAGAACATTTGGAAATTGTCAGTTCAGAAATTGTAAGTATATC
TAGGACAGATATGTCGTCCTTATGATAGAAAACAAGAATGTTTTATATTG
TATCATTCTATGAATTGCCTAAGTGTTTTATTATTTTATTATTCCGCAAC
ATCAGCTTGTCTGCCTGGCGTTCCGCTATGTTTTGTCAATTTTTGATAAA
GAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAACAACAAAACTTCCATTA
GCTGATCCAGGGAGGTTATATAGAATATAACCTCCTTGGTTGATCTTGTG
TGTCAATCTCTATTACATCATGACACAGATATTTGCTGTAGCTATCATCA
ACATAAGTGGTTTATCCACTCCTTCATGGGGGGTTACTGTTGCTAGCCTA
AGCCCCCCTCTCACTGGACCCGTGGCACTCTGGCGGCGTCGCTGCGGCCG
ATCGAATTGACAAAGCACTCAACGAATTTCATCGATACAAAACGAATCTT
TTAAGCTTTGTGTGTTTTTTTGTTTTTTTGGTCATATTTGTACGTTTTGA
ATGATATTCCAATTATAAAGTCAAGGGTAACACAAATTCAGTTTAGGACG
CAGCGACGCCGCCAGCGTGCCTCGGGTCCAGTGAGAGGGGGGCTAAAGGT
CTCTTCATGTTAACCCCTCACTGTCCAAACAAATTTCGAAGTGAAACAAC
TACGTATTTTTGAGGAGCACCTATGTCACTGGCATCACAATACTCCACGT
GTATATATATGTGGCAGATGTCCAGAAATGAAACGAAGCATTTGGAACAT
CAGAACAGTTTTGAAAAGGTCTGAAAAAACATGTTGTATCAAAAACCATT
CGAGCATTCCTATTTGGATACGGGAAAATCTACGGTCAAGCGTCTACTTG
TCAATAGCACAGCCACTGCGAACACTTTGGAAGTTTATTTCTATTTCAGG
ATTCTTCTCACCATGCTTCCGGGCGCAGCTTGTTACTTCTTCATGTGGTT
TTCCCCTGACATCGTCAGTCCAACAGGAAAGCTGATGTGGTATCTTCTCT
TCTACGGCGGATATCAAGTCATCATGGCGGTATGAACCTTCTGTCAGTAG
AGAATCGCTTGACAAATACTGAAGTAGTCTCCAACCAGACCCAATAGATT
GCAAAGACCGTATCCAACTGGAAGAAGGAGCTTATAGTGCAATCTTGGGT
TGGCTATGAAAACTCCTTCTGCCTGTTGGATACGGTCTTTGCCAACCCGT
AGGTCTGCTTGGAGACTATACTGAAGAGCTATAACCGCCATTAACATTAA
TCCGCCGGGTCCTTGACCCGCTCGGAAGGAGGGTCTATCCCCTCACAATG
CTTACTCCCTTTACCCTTCGGGTGCAGGATCAACTCCTCGCCGCAACCTG
GGCATCGTTTCCGTCTCACCATGGTCGAGTAAAGGGCACAAGGCGGAGAT
TATAACTGAGAAATTGACTGAGAAATTCGAACCGTGTTACTGCTAGCACG
CTGGCGTGGCTATGGCGTGAATGACGTGTCTACTGATCACGTGAGCTAGG
GTTCGAACGGCTAATTAGCATATTTGAGCCTTTGCTCAAATCATCACCTT
GAGTTTGACAGATCTCTAGTGCAGGTTTGCACAGTTTGGATGCACATGGT
TGGCGATCTATTTTGACGTATCTTTTCAGGGTGGCGGAATTATGTACCCT
GGTGGAATTATGTTCAAGTAGTAGATGCGCAATGGACGACGGGAAGCCGA
CGGGTGTATTTGCATACAACTATAGGTGGGTATGTCTTGGGCAACTGCTC
GGGCGGGGAAGAAAAACTCGCTATTGATTGAGTTCGCGGAGCCGGGGCCT
ACAACCCATGATCTCCGTTAATAATTCTGTAGATCCTTCTATCTTCCAGG
GATTTCTCAATGCAAGGTCCGCCCTCGTGATGTATGCGACCCAGGAACCG
AGAGAAAGAGACATCCTGAATACATATTGTACGTATATACTACAAGACTA
ATGCTCTACCAAGTTGCTACACCATGTTTCTACATAGACTTGATGAAAGT
CAACTGAAATTGTGAGGATATAATTTTAGCCCGGGATATCTAACTTGCCT
AATGCTACGGTCCCAATTGCGCCGGTGCCCGTAGGGGGTGTAGTCCTGTC
CGGGCCCCGAAGCCACACATTTGTCCCGGTGGACTGCCGGGTACGGGTGG
GGGGTACCTCCCGGTGTTCGCACGATTAGCTCACGGCGTCTATTTAATTA
AATTTGTTACCAGCTCCCGCGTTCATTTTAAGTCCGGGCTAAGATGATTT
GGGGTCCCGGCCGGGCCCAGAAAATATCCCGGAAGCCGCAGGGTGTCCCA
CGGGGCCATTTGGGGGCCACGCCCGAAAGTGAAAAAAACTACGTCAACTA
CCCGGCGCGACCCATTTTCCAATTGGGACCATCGCATAAATAAGATGAGA
AAAAAAACTCCTTTGCTCCTTAGCGTCCGCCTTTGGCATTGCTGCATCAC
TGCTCGGCTTGCTGTTGCAACAAGGGACGTTTACGCTGTTCCATGCCGAC
CTTGGATACAACCCGTGTGGTAACGGAACTCACAACGGTACGGGCTATGG
CTCGACTCGAG Coding sequence (CDS) from alignment at Sc0000101:297100..299910+ >transcript:BL88752_cuf0 ID=transcript:BL88752_cuf0|Name=transcript:BL88752_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=999bp|location=Sequence derived from alignment at Sc0000101:297100..299910+ (Branchiostoma lanceolatum)
ATGCTTCCGGGCGCAGCTTGTTACTTCTTCATGTGGTTTTCCCCTGACAT
CGTCAGTCCAACAGGAAAGCTGATGTGGTATCTTCTCTTCTACGGCGGAT
ATCAAGTCATCATGGCGGGATTTCTCAATGCAAGGTCCGCCCTCGTGATG
TATGCGACCCAGGAACCGAGAGAAAGAGACATCCTGAATACATATTCGTC
CGCCTTTGGCATTGCTGCATCACTGCTCGGCTTGCTGTTGCAACAAGGGA
CGTTTACGCTGTTCCATGCCGACCTTGGATACAACCCGTGTGGTAACGGA
ACTCACAACGGTACGGGCTATGGCTCGACTCGAATGCTTCCGGGCGCAGC
TTGTTACTTCTTCATGTGGTTTTCCCCTGACATCGTCAGTCCAACAGGAA
AGCTGATGTGGTATCTTCTCTTCTACGGCGGATATCAAGTCATCATGGCG
GGATTTCTCAATGCAAGGTCCGCCCTCGTGATGTATGCGACCCAGGAACC
GAGAGAAAGAGACATCCTGAATACATATTCGTCCGCCTTTGGCATTGCTG
CATCACTGCTCGGCTTGCTGTTGCAACAAGGGACGTTTACGCTGTTCCAT
GCCGACCTTGGATACAACCCGTGTGGTAACGGAACTCACAACGGTACGGG
CTATGGCTCGACTCGAATGCTTCCGGGCGCAGCTTGTTACTTCTTCATGT
GGTTTTCCCCTGACATCGTCAGTCCAACAGGAAAGCTGATGTGGTATCTT
CTCTTCTACGGCGGATATCAAGTCATCATGGCGGGATTTCTCAATGCAAG
GTCCGCCCTCGTGATGTATGCGACCCAGGAACCGAGAGAAAGAGACATCC
TGAATACATATTCGTCCGCCTTTGGCATTGCTGCATCACTGCTCGGCTTG
CTGTTGCAACAAGGGACGTTTACGCTGTTCCATGCCGACCTTGGATACAA
CCCGTGTGGTAACGGAACTCACAACGGTACGGGCTATGGCTCGACTCGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000101 | genome | Sc0000101:297100..299910 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88752_cuf0 |
| Biotype | protein_coding |
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