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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88625_cuf0 >transcript:BL88625_cuf0-protein ID=transcript:BL88625_cuf0-protein|Name=transcript:BL88625_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=450bp
FNNFFTAQASVDDTKASLPQLDFLTDVRFSECFTTPAEIELYVSALDISK
ACGHDNVDNRFLKLICPYISDKIAYVFNLSFCHGVFPKAWKRANVVPIFK
KGEPDDVSNYRPVSLLPCLSKILEKIVSKHLYNHLMSQNLLYSLQSGFIR
GDSTVNQLICITDKIFNALDSNKEVRAVYLDFSRAFDKVWHKGLIFKLQR
NGVDGPILNWFHSYLSDREQRVVIDGQCSDWSYVGAGVPQGSVLGPLLFL
VFINDMVDGLVTCPFLFADDSSLLDIVEDPNVTADRLNTDLRKISFWSST
WLMNLNPLKTEEMCFSKKSNPPDHPPLLLDNCVIKSVKTHKHIGTFLTST
LSWETQISHMIGKASKRVSTLNKLKFRLSRTVLDVIYKSFIRPLLEYADI
IWHGCTLYDSQRLERVQYECALAVSGAVRGSSYSSLLSELGWEKLSDRRH Run BLAST on NCBI mRNA from alignment at Sc0000048:1203103..1204453- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88625_cuf0 ID=transcript:BL88625_cuf0|Name=transcript:BL88625_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1351bp|location=Sequence derived from alignment at Sc0000048:1203103..1204453- (Branchiostoma lanceolatum)
GTTCAACAATTTTTTCACTGCTCAGGCCTCTGTAGATGACACCAAGGCAA
GCCTCCCACAACTTGATTTTCTCACTGATGTCCGATTTTCAGAATGTTTT
ACCACACCTGCCGAGATTGAACTCTATGTATCCGCTCTAGATATATCCAA
AGCGTGTGGTCACGATAATGTTGATAATCGCTTTCTTAAACTCATATGCC
CTTACATATCTGATAAGATCGCTTACGTTTTCAATTTGTCATTTTGCCAT
GGTGTCTTTCCAAAGGCCTGGAAACGGGCAAACGTGGTTCCAATTTTCAA
AAAGGGAGAACCAGATGATGTATCTAATTATCGCCCCGTATCTCTGTTGC
CCTGTTTGTCCAAAATTTTAGAAAAAATTGTATCCAAACACTTGTATAAC
CATTTGATGTCTCAAAATTTACTATATTCCCTCCAGTCGGGCTTCATCCG
CGGAGATTCGACAGTAAATCAACTTATTTGTATTACTGATAAAATCTTTA
ATGCTCTAGATTCCAACAAAGAAGTCAGAGCGGTTTACTTAGACTTTTCT
AGAGCATTTGACAAAGTCTGGCATAAAGGACTTATTTTCAAGCTGCAGAG
AAACGGGGTCGACGGCCCAATCTTAAATTGGTTCCATAGCTACCTCTCTG
ACAGAGAGCAAAGAGTTGTTATTGATGGTCAATGTTCGGATTGGAGTTAT
GTTGGCGCAGGTGTACCTCAGGGTTCAGTTTTAGGGCCTCTCTTATTTCT
TGTCTTCATTAATGACATGGTGGACGGTCTAGTTACATGCCCTTTTTTAT
TTGCTGACGATAGTTCATTATTGGACATTGTGGAAGATCCTAACGTTACA
GCTGATCGACTCAATACTGATCTTAGGAAGATATCATTTTGGTCTTCAAC
ATGGCTTATGAACCTAAACCCTTTAAAGACTGAAGAAATGTGTTTTTCTA
AGAAATCAAATCCTCCCGACCACCCCCCTCTTCTTCTTGATAACTGTGTT
ATCAAATCAGTCAAAACCCACAAGCATATAGGGACTTTTCTTACGTCCAC
CTTGTCATGGGAAACACAAATTTCTCATATGATTGGCAAGGCGTCCAAAC
GAGTGTCCACTCTTAACAAATTGAAATTCAGATTATCACGAACAGTACTT
GATGTTATTTATAAATCCTTTATTCGTCCTCTCCTTGAATATGCTGACAT
TATTTGGCATGGATGTACTTTATATGATTCCCAGCGATTAGAACGTGTCC
AATACGAATGCGCGCTTGCAGTCTCAGGGGCTGTAAGAGGGTCTTCGTAT
TCTTCGCTACTTTCTGAATTAGGTTGGGAAAAACTTTCGGATCGTCGTCA
C Coding sequence (CDS) from alignment at Sc0000048:1203103..1204453- >transcript:BL88625_cuf0 ID=transcript:BL88625_cuf0|Name=transcript:BL88625_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1350bp|location=Sequence derived from alignment at Sc0000048:1203103..1204453- (Branchiostoma lanceolatum)
TTCAACAATTTTTTCACTGCTCAGGCCTCTGTAGATGACACCAAGGCAAG
CCTCCCACAACTTGATTTTCTCACTGATGTCCGATTTTCAGAATGTTTTA
CCACACCTGCCGAGATTGAACTCTATGTATCCGCTCTAGATATATCCAAA
GCGTGTGGTCACGATAATGTTGATAATCGCTTTCTTAAACTCATATGCCC
TTACATATCTGATAAGATCGCTTACGTTTTCAATTTGTCATTTTGCCATG
GTGTCTTTCCAAAGGCCTGGAAACGGGCAAACGTGGTTCCAATTTTCAAA
AAGGGAGAACCAGATGATGTATCTAATTATCGCCCCGTATCTCTGTTGCC
CTGTTTGTCCAAAATTTTAGAAAAAATTGTATCCAAACACTTGTATAACC
ATTTGATGTCTCAAAATTTACTATATTCCCTCCAGTCGGGCTTCATCCGC
GGAGATTCGACAGTAAATCAACTTATTTGTATTACTGATAAAATCTTTAA
TGCTCTAGATTCCAACAAAGAAGTCAGAGCGGTTTACTTAGACTTTTCTA
GAGCATTTGACAAAGTCTGGCATAAAGGACTTATTTTCAAGCTGCAGAGA
AACGGGGTCGACGGCCCAATCTTAAATTGGTTCCATAGCTACCTCTCTGA
CAGAGAGCAAAGAGTTGTTATTGATGGTCAATGTTCGGATTGGAGTTATG
TTGGCGCAGGTGTACCTCAGGGTTCAGTTTTAGGGCCTCTCTTATTTCTT
GTCTTCATTAATGACATGGTGGACGGTCTAGTTACATGCCCTTTTTTATT
TGCTGACGATAGTTCATTATTGGACATTGTGGAAGATCCTAACGTTACAG
CTGATCGACTCAATACTGATCTTAGGAAGATATCATTTTGGTCTTCAACA
TGGCTTATGAACCTAAACCCTTTAAAGACTGAAGAAATGTGTTTTTCTAA
GAAATCAAATCCTCCCGACCACCCCCCTCTTCTTCTTGATAACTGTGTTA
TCAAATCAGTCAAAACCCACAAGCATATAGGGACTTTTCTTACGTCCACC
TTGTCATGGGAAACACAAATTTCTCATATGATTGGCAAGGCGTCCAAACG
AGTGTCCACTCTTAACAAATTGAAATTCAGATTATCACGAACAGTACTTG
ATGTTATTTATAAATCCTTTATTCGTCCTCTCCTTGAATATGCTGACATT
ATTTGGCATGGATGTACTTTATATGATTCCCAGCGATTAGAACGTGTCCA
ATACGAATGCGCGCTTGCAGTCTCAGGGGCTGTAAGAGGGTCTTCGTATT
CTTCGCTACTTTCTGAATTAGGTTGGGAAAAACTTTCGGATCGTCGTCAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000048 | genome | Sc0000048:1203103..1204453 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88625_cuf0 |
| Biotype | protein_coding |
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