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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88496_cuf0 >transcript:BL88496_cuf0-protein ID=transcript:BL88496_cuf0-protein|Name=transcript:BL88496_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=374bp
NKTKIMIFNKRGHLFSNFKFQLFNQNIEIVSSYSYLGVMFTTGCTFSTAM
KTLQKKALRALFSIKSTLGNSNPPISVYTKLFDACVVPILTYGAEVWGKI
GLNDNSPIEQVHLKFCKAILGVRKNASNLATRAELGRYPLWIEVYTRIYS
YYKRLVREMPKDSLQYEAFLVQQDLHRRKIPCWLSNISKILEESGFAYLL
LNKDRNTLSAQSELKQRLKDNFLQHFYSQLNSSGEKGKNGNKLRTYKKFK
ITYEKEKYLDIQNSNYRRAMTKLRISDHPLQIEVGRYNQTPPNNRMCTFC
DNDCIEDEIHFILECSLYADMRRSLVSPIQLDKKYTHLKNNELFTCIMSS
KNDDIIGKLCEFVYKCFKKREETL Run BLAST on NCBI mRNA from alignment at Sc0000622:49472..50716- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88496_cuf0 ID=transcript:BL88496_cuf0|Name=transcript:BL88496_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1245bp|location=Sequence derived from alignment at Sc0000622:49472..50716- (Branchiostoma lanceolatum)
AACAAAACTAAAATAATGATATTTAATAAAAGAGGACACTTGTTCTCAAA
CTTTAAATTCCAATTGTTTAACCAAAACATAGAGATTGTATCGTCTTATA
GTTATCTAGGAGTGATGTTTACAACGGGTTGTACTTTCAGCACCGCTATG
AAAACCCTGCAAAAGAAGGCTTTACGAGCCCTCTTCAGTATTAAATCAAC
TCTTGGAAACAGCAATCCCCCTATATCAGTGTACACTAAGCTATTCGATG
CATGTGTAGTTCCAATATTAACTTATGGTGCGGAGGTATGGGGCAAGATT
GGACTAAACGACAACTCTCCAATTGAACAAGTACATCTCAAATTCTGTAA
AGCAATCCTGGGCGTAAGAAAAAATGCCAGCAACCTTGCCACAAGAGCAG
AGCTTGGTAGATATCCCCTCTGGATTGAAGTGTATACTAGAATCTATTCA
TACTATAAAAGATTAGTTAGAGAAATGCCGAAAGATAGCTTACAATATGA
AGCTTTTTTAGTACAGCAGGACCTACATAGGAGAAAGATACCATGCTGGC
TTTCAAATATTAGTAAAATCTTGGAGGAGTCAGGCTTTGCCTACCTTTTA
CTTAACAAAGACCGAAACACGCTATCCGCTCAATCTGAACTAAAACAGAG
GCTGAAAGACAACTTTCTTCAACATTTCTACTCACAACTTAATTCTTCTG
GTGAAAAAGGGAAGAATGGAAACAAATTGAGAACTTACAAAAAATTCAAG
ATTACGTATGAAAAAGAAAAATATCTAGATATACAAAATTCTAACTATCG
CCGAGCCATGACTAAACTAAGGATCAGCGATCATCCATTGCAAATTGAAG
TTGGAAGGTACAACCAGACTCCACCAAATAACAGAATGTGTACTTTCTGT
GACAATGATTGTATAGAAGATGAAATACATTTTATCTTAGAATGCTCACT
ATACGCAGACATGCGCAGATCCCTTGTAAGTCCCATACAACTAGACAAAA
AATATACGCATCTTAAAAATAACGAGCTATTCACATGTATCATGTCATCT
AAAAACGACGATATAATTGGAAAACTATGTGAATTTGTATACAAATGTTT
CAAGAAGAGAGAAGAGACTCTGTAGATTTAGATGGAATATATAACAATGT
TCCATTTCTTTTACTTTATGTTACCTAATGCATTTAGCCCATGCTGGGCA
TGAATATGCAATAAAGTTCATTGTCATTGTCATTGTCATTGTCAT Coding sequence (CDS) from alignment at Sc0000622:49472..50716- >transcript:BL88496_cuf0 ID=transcript:BL88496_cuf0|Name=transcript:BL88496_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1125bp|location=Sequence derived from alignment at Sc0000622:49472..50716- (Branchiostoma lanceolatum)
AACAAAACTAAAATAATGATATTTAATAAAAGAGGACACTTGTTCTCAAA
CTTTAAATTCCAATTGTTTAACCAAAACATAGAGATTGTATCGTCTTATA
GTTATCTAGGAGTGATGTTTACAACGGGTTGTACTTTCAGCACCGCTATG
AAAACCCTGCAAAAGAAGGCTTTACGAGCCCTCTTCAGTATTAAATCAAC
TCTTGGAAACAGCAATCCCCCTATATCAGTGTACACTAAGCTATTCGATG
CATGTGTAGTTCCAATATTAACTTATGGTGCGGAGGTATGGGGCAAGATT
GGACTAAACGACAACTCTCCAATTGAACAAGTACATCTCAAATTCTGTAA
AGCAATCCTGGGCGTAAGAAAAAATGCCAGCAACCTTGCCACAAGAGCAG
AGCTTGGTAGATATCCCCTCTGGATTGAAGTGTATACTAGAATCTATTCA
TACTATAAAAGATTAGTTAGAGAAATGCCGAAAGATAGCTTACAATATGA
AGCTTTTTTAGTACAGCAGGACCTACATAGGAGAAAGATACCATGCTGGC
TTTCAAATATTAGTAAAATCTTGGAGGAGTCAGGCTTTGCCTACCTTTTA
CTTAACAAAGACCGAAACACGCTATCCGCTCAATCTGAACTAAAACAGAG
GCTGAAAGACAACTTTCTTCAACATTTCTACTCACAACTTAATTCTTCTG
GTGAAAAAGGGAAGAATGGAAACAAATTGAGAACTTACAAAAAATTCAAG
ATTACGTATGAAAAAGAAAAATATCTAGATATACAAAATTCTAACTATCG
CCGAGCCATGACTAAACTAAGGATCAGCGATCATCCATTGCAAATTGAAG
TTGGAAGGTACAACCAGACTCCACCAAATAACAGAATGTGTACTTTCTGT
GACAATGATTGTATAGAAGATGAAATACATTTTATCTTAGAATGCTCACT
ATACGCAGACATGCGCAGATCCCTTGTAAGTCCCATACAACTAGACAAAA
AATATACGCATCTTAAAAATAACGAGCTATTCACATGTATCATGTCATCT
AAAAACGACGATATAATTGGAAAACTATGTGAATTTGTATACAAATGTTT
CAAGAAGAGAGAAGAGACTCTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000622 | genome | Sc0000622:49472..50716 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88496_cuf0 |
| Biotype | protein_coding |
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