|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88482_cuf0 >transcript:BL88482_cuf0-protein ID=transcript:BL88482_cuf0-protein|Name=transcript:BL88482_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=126bp
MFGEILSYIYSGTLHVSLDKVQPLYQAADLLQLDYVRDTCSSYMAMNVER
STCVDLYKFADVFSIDTVLKACIKYIDGNFAKVASSAEFCSLSANQLTEI
ISHDELDVKEETTVWEAVVRWVQHSR Run BLAST on NCBI mRNA from alignment at Sc0000064:867131..868320+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88482_cuf0 ID=transcript:BL88482_cuf0|Name=transcript:BL88482_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1190bp|location=Sequence derived from alignment at Sc0000064:867131..868320+ (Branchiostoma lanceolatum)
GCTATCTGCACGGGTTTCTTGGAACTGTGGGCGACTTACAGAAGGCTGGG
GTACTGCAGGATGTCGTCCTTGAAGTCGAGGGCCGGCGGTTTCCCTGCCA
TCGGCTTGTTCTGTCCGCGGCCAGCCCCTACTTCAGGGCCATGTTTACAA
GTGACATGGCGGAAAGTCGGCAGAAGACGGTTGTTTTACAGGTAGGCTTG
GCGTAACCTGTGGTTGGTATAAGGAACAAAGATGCTACGTATCATAGAGA
ATGTGCAAAACTACAAAAATATATTCTGCAGTCTAATTATTACCTGTATA
TGTTTGTCGTTTGTCCCTTGCATGCCCCCCTCCCCACTTCACCCTAGGGA
TTCCTTTGGGGTCAACGGTTAACGTAAATGAGTTAACGTAAAAAAAAGAG
ATTGTAATTTGACATTTTTAAGGCAATAAATATCTATACGATTTGTGATA
TGTGATAAAATTTTGAATATTACTAGTACTGTACTTAAAAATACTAGTAT
AATGTTATATTTTTCTGCAGGGTTTGGATGCGGACATGTTTGGGGAGATC
CTGAGTTACATCTACTCGGGAACCCTCCATGTGTCCCTGGACAAAGTGCA
GCCCCTGTACCAGGCAGCCGACCTCCTCCAACTGGACTATGTGAGAGACA
CCTGCAGCAGCTACATGGCCATGAACGTGGAGCGCTCTACCTGTGTGGAC
CTGTACAAGTTTGCTGATGTCTTCTCCATAGACACAGTCCTGAAAGCTTG
TATAAAGTATATTGATGGGAACTTTGCTAAGGTGGGTCTTTCTTTCAAAA
TGGTGATTATAGATAAAGCCTCTGTAGAATTGAGTTGCAGAATGATAGCC
TCTTGAAATACCTTGTTTGAGAGTCTTCATCATGTTTGAATTATTAATAT
TTTAAATGCATGATGTTAGCAACTAAAAAAATATTTTTTTGTTATCAATA
TCATTATATCTTAACAGAATTAAAGCTTTTGTAAGCTGCAAGTTTAAATT
GATCATGAAATATGTATTGATATAGCTGTACATCTAGAATTACGTTGCAC
CTCAACAGGTTGCCTCCAGTGCTGAGTTCTGCAGCCTGAGTGCGAATCAG
CTGACTGAGATCATAAGCCACGATGAGCTGGATGTTAAAGAGGAGACAAC
AGTGTGGGAGGCTGTGGTGAGATGGGTGCAGCACAGCAGG Coding sequence (CDS) from alignment at Sc0000064:867131..868320+ >transcript:BL88482_cuf0 ID=transcript:BL88482_cuf0|Name=transcript:BL88482_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=756bp|location=Sequence derived from alignment at Sc0000064:867131..868320+ (Branchiostoma lanceolatum)
ATGTTTGGGGAGATCCTGAGTTACATCTACTCGGGAACCCTCCATGTGTC
CCTGGACAAAGTGCAGCCCCTGTACCAGGCAGCCGACCTCCTCCAACTGG
ACTATGTGAGAGACACCTGCAGCAGCTACATGGCCATGAACGTGGAGCGC
TCTACCTGTGTGGACCTGTACAAGTTTGCTGATGTCTTCTCCATAGACAC
AGTCCTGAAAGCTTGTATAAAGTATATTGATGGGAACTTTGCTAAGGTTG
CCTCCAGTGCTGAGTTCTGCAGCCTGAGTGCGAATCAGCTGACTGAGATC
ATAAGCCACGATGAGCTGGATGTTAAAGAGGAGACAACAGTGTGGGAGGC
TGTGGTGAGATGGGTGCAGCACAGCAGGATGTTTGGGGAGATCCTGAGTT
ACATCTACTCGGGAACCCTCCATGTGTCCCTGGACAAAGTGCAGCCCCTG
TACCAGGCAGCCGACCTCCTCCAACTGGACTATGTGAGAGACACCTGCAG
CAGCTACATGGCCATGAACGTGGAGCGCTCTACCTGTGTGGACCTGTACA
AGTTTGCTGATGTCTTCTCCATAGACACAGTCCTGAAAGCTTGTATAAAG
TATATTGATGGGAACTTTGCTAAGGTTGCCTCCAGTGCTGAGTTCTGCAG
CCTGAGTGCGAATCAGCTGACTGAGATCATAAGCCACGATGAGCTGGATG
TTAAAGAGGAGACAACAGTGTGGGAGGCTGTGGTGAGATGGGTGCAGCAC
AGCAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000064 | genome | Sc0000064:867131..868320 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88482_cuf0 |
| Biotype | protein_coding |
|
